BLASTX nr result

ID: Atropa21_contig00001588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00001588
         (1124 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006351114.1| PREDICTED: RNA-binding protein 39-like isofo...   108   4e-21
ref|XP_006351113.1| PREDICTED: RNA-binding protein 39-like isofo...    67   1e-08
ref|XP_004249855.1| PREDICTED: RNA-binding protein 39-like [Sola...    67   1e-08
gb|EOX92356.1| Splicing factor isoform 2 [Theobroma cacao]             64   9e-08
gb|EOX92355.1| Splicing factor isoform 1 [Theobroma cacao]             64   9e-08
gb|EPS66083.1| hypothetical protein M569_08694, partial [Genlise...    64   1e-07
gb|EMJ14011.1| hypothetical protein PRUPE_ppa002854mg [Prunus pe...    64   1e-07
ref|XP_003602518.1| Splicing factor-like protein [Medicago trunc...    64   1e-07
ref|XP_003602517.1| Splicing factor-like protein [Medicago trunc...    64   1e-07
emb|CBI21551.3| unnamed protein product [Vitis vinifera]               64   1e-07
ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Viti...    64   1e-07
emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]    64   1e-07
ref|XP_006427900.1| hypothetical protein CICLE_v10025229mg [Citr...    63   2e-07
ref|XP_004502884.1| PREDICTED: RNA-binding protein 39-like isofo...    63   2e-07
ref|XP_004502883.1| PREDICTED: RNA-binding protein 39-like isofo...    63   2e-07
gb|AFK36237.1| unknown [Medicago truncatula]                           63   2e-07
ref|XP_002310314.1| predicted protein [Populus trichocarpa]            63   2e-07
gb|ACJ85649.1| unknown [Medicago truncatula] gi|388499396|gb|AFK...    63   2e-07
ref|XP_003630170.1| RNA-binding protein [Medicago truncatula] gi...    63   2e-07
gb|ESW31791.1| hypothetical protein PHAVU_002G268000g [Phaseolus...    62   3e-07

>ref|XP_006351114.1| PREDICTED: RNA-binding protein 39-like isoform X2 [Solanum tuberosum]
          Length = 412

 Score =  108 bits (270), Expect = 4e-21
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = +2

Query: 968  IVPCYDLCHTYSHYGLSHFYRRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            I+PCYDLCHT SHYGLSH YRRFKE+KEKIEPEADPERDQRTVFAYQMPLKA
Sbjct: 4    IIPCYDLCHTDSHYGLSHLYRRFKEKKEKIEPEADPERDQRTVFAYQMPLKA 55


>ref|XP_006351113.1| PREDICTED: RNA-binding protein 39-like isoform X1 [Solanum tuberosum]
          Length = 578

 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRFKE+KEKIEPEADPERDQRTVFAYQMPLKA
Sbjct: 190  RRFKEKKEKIEPEADPERDQRTVFAYQMPLKA 221


>ref|XP_004249855.1| PREDICTED: RNA-binding protein 39-like [Solanum lycopersicum]
          Length = 580

 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 31/32 (96%), Positives = 32/32 (100%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRFKE+KEKIEPEADPERDQRTVFAYQMPLKA
Sbjct: 188  RRFKEKKEKIEPEADPERDQRTVFAYQMPLKA 219


>gb|EOX92356.1| Splicing factor isoform 2 [Theobroma cacao]
          Length = 497

 Score = 64.3 bits (155), Expect = 9e-08
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRFKE+KE +EPEADPERDQRTVFAYQMPLKA
Sbjct: 109  RRFKEKKEVVEPEADPERDQRTVFAYQMPLKA 140


>gb|EOX92355.1| Splicing factor isoform 1 [Theobroma cacao]
          Length = 568

 Score = 64.3 bits (155), Expect = 9e-08
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRFKE+KE +EPEADPERDQRTVFAYQMPLKA
Sbjct: 178  RRFKEKKEVVEPEADPERDQRTVFAYQMPLKA 209


>gb|EPS66083.1| hypothetical protein M569_08694, partial [Genlisea aurea]
          Length = 170

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRFK++KE +EPEADPERDQRTVFAYQMPLKA
Sbjct: 1    RRFKDKKENVEPEADPERDQRTVFAYQMPLKA 32


>gb|EMJ14011.1| hypothetical protein PRUPE_ppa002854mg [Prunus persica]
          Length = 628

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRFK++KE +EPEADPERDQRTVFAYQMPLKA
Sbjct: 239  RRFKDKKEAVEPEADPERDQRTVFAYQMPLKA 270


>ref|XP_003602518.1| Splicing factor-like protein [Medicago truncatula]
            gi|355491566|gb|AES72769.1| Splicing factor-like protein
            [Medicago truncatula]
          Length = 766

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRF+E+KE +EPEADPERDQRTVFAYQMPLKA
Sbjct: 195  RRFREKKETVEPEADPERDQRTVFAYQMPLKA 226


>ref|XP_003602517.1| Splicing factor-like protein [Medicago truncatula]
            gi|355491565|gb|AES72768.1| Splicing factor-like protein
            [Medicago truncatula]
          Length = 731

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRF+E+KE +EPEADPERDQRTVFAYQMPLKA
Sbjct: 195  RRFREKKETVEPEADPERDQRTVFAYQMPLKA 226


>emb|CBI21551.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRFK++KE +EPEADPERDQRTVFAYQMPLKA
Sbjct: 112  RRFKDKKEAVEPEADPERDQRTVFAYQMPLKA 143


>ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
          Length = 542

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRFK++KE +EPEADPERDQRTVFAYQMPLKA
Sbjct: 150  RRFKDKKEAVEPEADPERDQRTVFAYQMPLKA 181


>emb|CAN82467.1| hypothetical protein VITISV_002664 [Vitis vinifera]
          Length = 461

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRFK++KE +EPEADPERDQRTVFAYQMPLKA
Sbjct: 76   RRFKDKKEAVEPEADPERDQRTVFAYQMPLKA 107


>ref|XP_006427900.1| hypothetical protein CICLE_v10025229mg [Citrus clementina]
            gi|568820031|ref|XP_006464535.1| PREDICTED: RNA-binding
            protein 39-like [Citrus sinensis]
            gi|557529890|gb|ESR41140.1| hypothetical protein
            CICLE_v10025229mg [Citrus clementina]
          Length = 589

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RR+KE+KE +EPEADPERDQRTVFAYQMPLKA
Sbjct: 199  RRYKEKKEVVEPEADPERDQRTVFAYQMPLKA 230


>ref|XP_004502884.1| PREDICTED: RNA-binding protein 39-like isoform X2 [Cicer arietinum]
          Length = 567

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRF+E+KE +EPEADPERDQRTVFAYQMPLKA
Sbjct: 181  RRFREKKEALEPEADPERDQRTVFAYQMPLKA 212


>ref|XP_004502883.1| PREDICTED: RNA-binding protein 39-like isoform X1 [Cicer arietinum]
          Length = 583

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRF+E+KE +EPEADPERDQRTVFAYQMPLKA
Sbjct: 197  RRFREKKEALEPEADPERDQRTVFAYQMPLKA 228


>gb|AFK36237.1| unknown [Medicago truncatula]
          Length = 202

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRF+++KE +EPEADPERDQRTVFAYQMPLKA
Sbjct: 19   RRFRDKKENVEPEADPERDQRTVFAYQMPLKA 50


>ref|XP_002310314.1| predicted protein [Populus trichocarpa]
          Length = 391

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRFKE+KE +EPEADPERDQRTVF YQMPLKA
Sbjct: 1    RRFKEKKEVVEPEADPERDQRTVFVYQMPLKA 32


>gb|ACJ85649.1| unknown [Medicago truncatula] gi|388499396|gb|AFK37764.1| unknown
            [Medicago truncatula]
          Length = 365

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRF+++KE +EPEADPERDQRTVFAYQMPLKA
Sbjct: 182  RRFRDKKENVEPEADPERDQRTVFAYQMPLKA 213


>ref|XP_003630170.1| RNA-binding protein [Medicago truncatula] gi|355524192|gb|AET04646.1|
            RNA-binding protein [Medicago truncatula]
          Length = 567

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRF+++KE +EPEADPERDQRTVFAYQMPLKA
Sbjct: 182  RRFRDKKENVEPEADPERDQRTVFAYQMPLKA 213


>gb|ESW31791.1| hypothetical protein PHAVU_002G268000g [Phaseolus vulgaris]
          Length = 547

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = +2

Query: 1028 RRFKERKEKIEPEADPERDQRTVFAYQMPLKA 1123
            RRF+++KE +EPEADPERDQRTVFAYQMPLKA
Sbjct: 168  RRFRDKKEAVEPEADPERDQRTVFAYQMPLKA 199


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