BLASTX nr result
ID: Atropa21_contig00001567
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00001567
(1636 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001233834.1| chloroplast-specific ribosomal protein [Sola... 458 e-126
ref|XP_006347313.1| PREDICTED: ribosome-binding factor PSRP1, ch... 455 e-125
gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum] 440 e-120
gb|EOY23705.1| Plastid-specific 30S ribosomal protein 1 [Theobro... 360 1e-96
ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloropl... 359 2e-96
emb|CBI23087.3| unnamed protein product [Vitis vinifera] 352 2e-94
ref|XP_004147328.1| PREDICTED: ribosome-binding factor PSRP1, ch... 350 1e-93
ref|XP_006493202.1| PREDICTED: ribosome-binding factor PSRP1, ch... 348 5e-93
ref|XP_006441240.1| hypothetical protein CICLE_v10021260mg [Citr... 348 5e-93
ref|XP_004170169.1| PREDICTED: LOW QUALITY PROTEIN: ribosome-bin... 348 5e-93
gb|EPS59457.1| hypothetical protein M569_15350, partial [Genlise... 347 1e-92
ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, ch... 344 7e-92
gb|EMJ19977.1| hypothetical protein PRUPE_ppa009612mg [Prunus pe... 341 5e-91
ref|XP_003526761.1| PREDICTED: ribosome-binding factor PSRP1, ch... 337 9e-90
gb|EXB78385.1| 30S ribosomal protein 1 [Morus notabilis] 337 1e-89
ref|XP_002317839.1| 30S ribosomal family protein [Populus tricho... 336 2e-89
dbj|BAB11201.1| unnamed protein product [Arabidopsis thaliana] 336 2e-89
ref|NP_568447.1| putative 30S ribosomal protein [Arabidopsis tha... 336 2e-89
ref|XP_002872116.1| hypothetical protein ARALYDRAFT_489312 [Arab... 336 2e-89
ref|NP_001241953.1| uncharacterized protein LOC100784915 [Glycin... 335 3e-89
>ref|NP_001233834.1| chloroplast-specific ribosomal protein [Solanum lycopersicum]
gi|51457950|gb|AAU03364.1| chloroplast-specific ribosomal
protein [Solanum lycopersicum]
Length = 311
Score = 458 bits (1178), Expect = e-126
Identities = 236/292 (80%), Positives = 248/292 (84%), Gaps = 1/292 (0%)
Frame = +3
Query: 219 MATLSLSPSVGTTFHCLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-FLNSAFKMYDI 395
MATLSLSPSVGTTFH LH FLNSAFKM +I
Sbjct: 1 MATLSLSPSVGTTFHSLHSYPNGSSSYSSSCPATASPALSLTLSSTNSRFLNSAFKMNEI 60
Query: 396 NVPMRNNKVTKSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEKLGKAAQKHSHLV 575
NVP+RN +VTKS G+RMSWDGPLSSVKLILQGKNLELTPAVK YVEEKLGKA QKHSHL
Sbjct: 61 NVPVRN-RVTKSFGVRMSWDGPLSSVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLA 119
Query: 576 REVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSIDMVSSIIQRKLR 755
REVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEED ES+YGSIDMVSSIIQRKLR
Sbjct: 120 REVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDGESIYGSIDMVSSIIQRKLR 179
Query: 756 KIKEKDSDHGRHMKGFDRLKVRDPEMLVVQEDLETIPQEEEVEDDKSEGFVTDIVRKKFF 935
KIKEKDSD GRHMKGFDRLKVRDPE L+VQEDLET+ QEEEVEDDKS+GFVT++VRKK F
Sbjct: 180 KIKEKDSDRGRHMKGFDRLKVRDPEALLVQEDLETLSQEEEVEDDKSDGFVTEVVRKKSF 239
Query: 936 DMPPLSVTEAIEQLENVDHDFYGFRNEETGEINILYRRKEGGYGIIIPKEDG 1091
DMPPLSV EAIEQLENVDHDFYGFRNEETGEINI+YRRKEGGYG+IIPKEDG
Sbjct: 240 DMPPLSVNEAIEQLENVDHDFYGFRNEETGEINIVYRRKEGGYGLIIPKEDG 291
>ref|XP_006347313.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Solanum
tuberosum]
Length = 312
Score = 455 bits (1171), Expect = e-125
Identities = 236/293 (80%), Positives = 249/293 (84%), Gaps = 2/293 (0%)
Frame = +3
Query: 219 MATLSLSPSVGTTFHCLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GFLNSAFKMYDI 395
MATLSLSPSVGT FH LH GFLNSAFK +I
Sbjct: 1 MATLSLSPSVGTIFHSLHSYPTGPSSYSSSCPTTASPAFSLTLSSSNSGFLNSAFKKNEI 60
Query: 396 NVPMRNNKVTKSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEKLGKAAQKHSHLV 575
NVP+RN +V S G+RMSWDGPLSSVKLILQGKNLELTPAVK YVEEKLGKA QKHSHL
Sbjct: 61 NVPVRN-RVKNSFGVRMSWDGPLSSVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLA 119
Query: 576 REVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSIDMVSSIIQRKLR 755
REVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAES+YGSIDMVSSIIQRKLR
Sbjct: 120 REVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESIYGSIDMVSSIIQRKLR 179
Query: 756 KIKEKDSDHGRHMKGFDRLKVRDPEMLVVQEDLETIPQEEEVE-DDKSEGFVTDIVRKKF 932
KIKEKDSDHGRHMKGFDRLKVRDPE+L+VQEDLET+PQEEEVE DDKS+GFVT++VRKK
Sbjct: 180 KIKEKDSDHGRHMKGFDRLKVRDPEVLLVQEDLETLPQEEEVEDDDKSDGFVTEVVRKKS 239
Query: 933 FDMPPLSVTEAIEQLENVDHDFYGFRNEETGEINILYRRKEGGYGIIIPKEDG 1091
FDMPPLSV EAIEQLENVDHDFYGFRNEETGEINI+YRRKEGGYG+IIPKEDG
Sbjct: 240 FDMPPLSVNEAIEQLENVDHDFYGFRNEETGEINIVYRRKEGGYGLIIPKEDG 292
>gb|ACV83721.1| chloroplast ribosomal protein [Solanum tuberosum]
Length = 280
Score = 440 bits (1131), Expect = e-120
Identities = 220/245 (89%), Positives = 233/245 (95%), Gaps = 1/245 (0%)
Frame = +3
Query: 360 GFLNSAFKMYDINVPMRNNKVTKSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEK 539
GFLNSAFK +INVP+RN +V S G+RMSWDGPLSSVKLILQGKNLELTPAVK YVEEK
Sbjct: 21 GFLNSAFKKNEINVPVRN-RVKXSFGVRMSWDGPLSSVKLILQGKNLELTPAVKDYVEEK 79
Query: 540 LGKAAQKHSHLVREVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSI 719
LGKA QKHSHL REVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAES+YGSI
Sbjct: 80 LGKAVQKHSHLAREVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESIYGSI 139
Query: 720 DMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEMLVVQEDLETIPQEEEVE-DDKS 896
DMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPE+L+VQEDLET+PQEEEVE DDKS
Sbjct: 140 DMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEVLLVQEDLETLPQEEEVEDDDKS 199
Query: 897 EGFVTDIVRKKFFDMPPLSVTEAIEQLENVDHDFYGFRNEETGEINILYRRKEGGYGIII 1076
+GFVT++VRKK FDMPPLSV EAIEQLENVDHDFYGFRNEETGEINI+YRRKEGGYG+II
Sbjct: 200 DGFVTEVVRKKSFDMPPLSVNEAIEQLENVDHDFYGFRNEETGEINIVYRRKEGGYGLII 259
Query: 1077 PKEDG 1091
PKEDG
Sbjct: 260 PKEDG 264
>gb|EOY23705.1| Plastid-specific 30S ribosomal protein 1 [Theobroma cacao]
Length = 320
Score = 360 bits (924), Expect = 1e-96
Identities = 176/246 (71%), Positives = 215/246 (87%), Gaps = 4/246 (1%)
Frame = +3
Query: 366 LNSAFKMYDINVPMRNNKVTKSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEKLG 545
+ ++FK DI R ++V S+ +RMSWDGPLSSVKLI+QGKNLELT VK +VEEK+G
Sbjct: 58 IGNSFK--DIETEPRKSRVC-SLTVRMSWDGPLSSVKLIIQGKNLELTDTVKQHVEEKVG 114
Query: 546 KAAQKHSHLVREVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSIDM 725
KA QKHSHLVREVDVRLSVRGGE GKGP+IRRCEVTLFTKKHGV+RAEEDAE+VYGSID+
Sbjct: 115 KAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYGSIDL 174
Query: 726 VSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEMLVVQEDLETIPQEEE----VEDDK 893
VSSI+QRKLRKIKEK+SDHGRHMKGF+RLKVR+P ++V++++E +P++E+ V + +
Sbjct: 175 VSSILQRKLRKIKEKESDHGRHMKGFNRLKVREPVAVLVEDEVEAVPEQEDDVEAVPEQE 234
Query: 894 SEGFVTDIVRKKFFDMPPLSVTEAIEQLENVDHDFYGFRNEETGEINILYRRKEGGYGII 1073
+G + +IVR K+FDMPPL+V+EAIEQLENVDHDFYGFRNEETGEINILY+RK GGYG+I
Sbjct: 235 DDGLIDEIVRTKYFDMPPLTVSEAIEQLENVDHDFYGFRNEETGEINILYKRKAGGYGLI 294
Query: 1074 IPKEDG 1091
IPK +G
Sbjct: 295 IPKGNG 300
>ref|XP_003634154.1| PREDICTED: 30S ribosomal protein 1, chloroplastic-like [Vitis
vinifera]
Length = 298
Score = 359 bits (922), Expect = 2e-96
Identities = 174/223 (78%), Positives = 201/223 (90%)
Frame = +3
Query: 423 TKSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEKLGKAAQKHSHLVREVDVRLSV 602
TK + +RMSWDGPLSSVKLILQGKNLELT V+S+VEEK+GKA QKHSHLVREVDVRLS+
Sbjct: 62 TKPLAVRMSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSI 121
Query: 603 RGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSIDMVSSIIQRKLRKIKEKDSDH 782
RGGELGKGPKIRRCEVTLFTKKHGV+RAEE AE++YGSIDMVSSIIQRKLRKIKEKDSDH
Sbjct: 122 RGGELGKGPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDH 181
Query: 783 GRHMKGFDRLKVRDPEMLVVQEDLETIPQEEEVEDDKSEGFVTDIVRKKFFDMPPLSVTE 962
GRHMKGF+RLKVRDPE +V+E+ + +PQ+E+ + + +IVR K+FDMPPL+V E
Sbjct: 182 GRHMKGFNRLKVRDPETPLVEEEADVVPQKEDGD------LINEIVRTKYFDMPPLTVPE 235
Query: 963 AIEQLENVDHDFYGFRNEETGEINILYRRKEGGYGIIIPKEDG 1091
A+EQLENVDHDF+GFRNEETGEINILY+RK GGYG+IIPKE+G
Sbjct: 236 AVEQLENVDHDFFGFRNEETGEINILYKRKAGGYGLIIPKENG 278
>emb|CBI23087.3| unnamed protein product [Vitis vinifera]
Length = 230
Score = 352 bits (904), Expect = 2e-94
Identities = 171/216 (79%), Positives = 196/216 (90%)
Frame = +3
Query: 444 MSWDGPLSSVKLILQGKNLELTPAVKSYVEEKLGKAAQKHSHLVREVDVRLSVRGGELGK 623
MSWDGPLSSVKLILQGKNLELT V+S+VEEK+GKA QKHSHLVREVDVRLS+RGGELGK
Sbjct: 1 MSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELGK 60
Query: 624 GPKIRRCEVTLFTKKHGVIRAEEDAESVYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGF 803
GPKIRRCEVTLFTKKHGV+RAEE AE++YGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGF
Sbjct: 61 GPKIRRCEVTLFTKKHGVVRAEEHAETLYGSIDMVSSIIQRKLRKIKEKDSDHGRHMKGF 120
Query: 804 DRLKVRDPEMLVVQEDLETIPQEEEVEDDKSEGFVTDIVRKKFFDMPPLSVTEAIEQLEN 983
+RLKVRDPE +V+E+ + +PQ+E+ + + +IVR K+FDMPPL+V EA+EQLEN
Sbjct: 121 NRLKVRDPETPLVEEEADVVPQKEDGD------LINEIVRTKYFDMPPLTVPEAVEQLEN 174
Query: 984 VDHDFYGFRNEETGEINILYRRKEGGYGIIIPKEDG 1091
VDHDF+GFRNEETGEINILY+RK GGYG+IIPKE+G
Sbjct: 175 VDHDFFGFRNEETGEINILYKRKAGGYGLIIPKENG 210
>ref|XP_004147328.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like [Cucumis
sativus]
Length = 310
Score = 350 bits (898), Expect = 1e-93
Identities = 174/243 (71%), Positives = 201/243 (82%)
Frame = +3
Query: 363 FLNSAFKMYDINVPMRNNKVTKSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEKL 542
F NS I RN + S IRM+WDGPLSSVKLI+QGKNLELT AVK +VEEK+
Sbjct: 54 FFNSCKNFGTIETASRNRHASNSFSIRMTWDGPLSSVKLIVQGKNLELTEAVKKHVEEKV 113
Query: 543 GKAAQKHSHLVREVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSID 722
GKA QKHSHLVREVDVRLSVRGGE GKGP+IRRCEVTLFTKKHGV+RAEEDAE+V+ SID
Sbjct: 114 GKAVQKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASID 173
Query: 723 MVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEMLVVQEDLETIPQEEEVEDDKSEG 902
+VSSIIQRKLRKIKEKDSD GRH+KGFDR KVR+P +VV++ +EEEV +
Sbjct: 174 LVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVED------EEEEVFQEDGGE 227
Query: 903 FVTDIVRKKFFDMPPLSVTEAIEQLENVDHDFYGFRNEETGEINILYRRKEGGYGIIIPK 1082
+ +IVR K+FDMPPL+V EAIEQL+N+DHDFYGFRNEETGEINILY+RK+GGYG+IIPK
Sbjct: 228 VIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK 287
Query: 1083 EDG 1091
E+G
Sbjct: 288 ENG 290
>ref|XP_006493202.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic-like [Citrus
sinensis]
Length = 319
Score = 348 bits (892), Expect = 5e-93
Identities = 174/230 (75%), Positives = 200/230 (86%), Gaps = 1/230 (0%)
Frame = +3
Query: 405 MRNNKV-TKSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEKLGKAAQKHSHLVRE 581
MR KV TK + +RMSWDGPLSSVKLI+QGKNLELT VK++VEEK+GKA KHSHLVRE
Sbjct: 76 MRPTKVHTKPLPVRMSWDGPLSSVKLIIQGKNLELTDTVKNHVEEKVGKAVLKHSHLVRE 135
Query: 582 VDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSIDMVSSIIQRKLRKI 761
VDVRLSVRGGE GKGP+IRRCEVTLFTKKHGV+RAEEDAE+VY SID+VSSIIQRKLRKI
Sbjct: 136 VDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKI 195
Query: 762 KEKDSDHGRHMKGFDRLKVRDPEMLVVQEDLETIPQEEEVEDDKSEGFVTDIVRKKFFDM 941
KEK+SDHGRHMKGF+RLKVR+P VV+ D + +EE+ + FV +IVR KFF+M
Sbjct: 196 KEKESDHGRHMKGFNRLKVREPVTQVVENDADVQSEEED------DNFVDEIVRMKFFEM 249
Query: 942 PPLSVTEAIEQLENVDHDFYGFRNEETGEINILYRRKEGGYGIIIPKEDG 1091
PPL+V+EAIEQLENVDHDFYGFRNEETGEINI+Y+RK GGYG+IIPK +G
Sbjct: 250 PPLTVSEAIEQLENVDHDFYGFRNEETGEINIVYKRKAGGYGVIIPKGNG 299
>ref|XP_006441240.1| hypothetical protein CICLE_v10021260mg [Citrus clementina]
gi|557543502|gb|ESR54480.1| hypothetical protein
CICLE_v10021260mg [Citrus clementina]
Length = 313
Score = 348 bits (892), Expect = 5e-93
Identities = 174/230 (75%), Positives = 200/230 (86%), Gaps = 1/230 (0%)
Frame = +3
Query: 405 MRNNKV-TKSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEKLGKAAQKHSHLVRE 581
MR KV TK + +RMSWDGPLSSVKLI+QGKNLELT VK++VEEK+GKA KHSHLVRE
Sbjct: 70 MRPTKVHTKPLPVRMSWDGPLSSVKLIIQGKNLELTDTVKNHVEEKVGKAVLKHSHLVRE 129
Query: 582 VDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSIDMVSSIIQRKLRKI 761
VDVRLSVRGGE GKGP+IRRCEVTLFTKKHGV+RAEEDAE+VY SID+VSSIIQRKLRKI
Sbjct: 130 VDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYASIDLVSSIIQRKLRKI 189
Query: 762 KEKDSDHGRHMKGFDRLKVRDPEMLVVQEDLETIPQEEEVEDDKSEGFVTDIVRKKFFDM 941
KEK+SDHGRHMKGF+RLKVR+P VV+ D + +EE+ + FV +IVR KFF+M
Sbjct: 190 KEKESDHGRHMKGFNRLKVREPVTQVVENDADVQSEEED------DNFVDEIVRMKFFEM 243
Query: 942 PPLSVTEAIEQLENVDHDFYGFRNEETGEINILYRRKEGGYGIIIPKEDG 1091
PPL+V+EAIEQLENVDHDFYGFRNEETGEINI+Y+RK GGYG+IIPK +G
Sbjct: 244 PPLTVSEAIEQLENVDHDFYGFRNEETGEINIVYKRKAGGYGVIIPKGNG 293
>ref|XP_004170169.1| PREDICTED: LOW QUALITY PROTEIN: ribosome-binding factor PSRP1,
chloroplastic-like [Cucumis sativus]
Length = 310
Score = 348 bits (892), Expect = 5e-93
Identities = 173/243 (71%), Positives = 200/243 (82%)
Frame = +3
Query: 363 FLNSAFKMYDINVPMRNNKVTKSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEKL 542
F NS I RN + S IRM+WDGPLSSVKLI+QGKNLELT AVK +VEEK+
Sbjct: 54 FFNSCKNFGTIETASRNRHASNSFSIRMTWDGPLSSVKLIVQGKNLELTEAVKKHVEEKV 113
Query: 543 GKAAQKHSHLVREVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSID 722
GKA QKHSHLVREVDVRLSVRGG GKGP+IRRCEVTLFTKKHGV+RAEEDAE+V+ SID
Sbjct: 114 GKAVQKHSHLVREVDVRLSVRGGXFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVFASID 173
Query: 723 MVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEMLVVQEDLETIPQEEEVEDDKSEG 902
+VSSIIQRKLRKIKEKDSD GRH+KGFDR KVR+P +VV++ +EEEV +
Sbjct: 174 LVSSIIQRKLRKIKEKDSDRGRHVKGFDRSKVREPAPIVVED------EEEEVFQEDGGE 227
Query: 903 FVTDIVRKKFFDMPPLSVTEAIEQLENVDHDFYGFRNEETGEINILYRRKEGGYGIIIPK 1082
+ +IVR K+FDMPPL+V EAIEQL+N+DHDFYGFRNEETGEINILY+RK+GGYG+IIPK
Sbjct: 228 VIDEIVRTKYFDMPPLTVEEAIEQLKNIDHDFYGFRNEETGEINILYKRKDGGYGLIIPK 287
Query: 1083 EDG 1091
E+G
Sbjct: 288 ENG 290
>gb|EPS59457.1| hypothetical protein M569_15350, partial [Genlisea aurea]
Length = 216
Score = 347 bits (889), Expect = 1e-92
Identities = 173/218 (79%), Positives = 193/218 (88%)
Frame = +3
Query: 435 GIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEKLGKAAQKHSHLVREVDVRLSVRGGE 614
GIRMSWDGPLSSVKLILQGKN EL+P VK+YVEEKLGKA QKHSHLVREVDVRLSVRGGE
Sbjct: 4 GIRMSWDGPLSSVKLILQGKNFELSPTVKNYVEEKLGKAVQKHSHLVREVDVRLSVRGGE 63
Query: 615 LGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSIDMVSSIIQRKLRKIKEKDSDHGRHM 794
LGKGPK+RRCE TLFTKKHGVIRAEEDA+SVYGSIDMVSSIIQRKLRKIKEKDSDHGRHM
Sbjct: 64 LGKGPKLRRCEATLFTKKHGVIRAEEDADSVYGSIDMVSSIIQRKLRKIKEKDSDHGRHM 123
Query: 795 KGFDRLKVRDPEMLVVQEDLETIPQEEEVEDDKSEGFVTDIVRKKFFDMPPLSVTEAIEQ 974
KGFDRLKVRD + ++ E + +E +DD E DIVR K+F+M PL+V+EA+EQ
Sbjct: 124 KGFDRLKVRDSD----ADEEEAVELLDEEDDDVQE----DIVRTKYFEMAPLTVSEAVEQ 175
Query: 975 LENVDHDFYGFRNEETGEINILYRRKEGGYGIIIPKED 1088
+ENVDHDFYGFRNEETGEINI+YRR+ GGYGIIIPK++
Sbjct: 176 MENVDHDFYGFRNEETGEINIIYRREAGGYGIIIPKQE 213
>ref|XP_002524427.1| Plastid-specific 30S ribosomal protein 1, chloroplast precursor,
putative [Ricinus communis] gi|223536311|gb|EEF37962.1|
Plastid-specific 30S ribosomal protein 1, chloroplast
precursor, putative [Ricinus communis]
Length = 311
Score = 344 bits (882), Expect = 7e-92
Identities = 170/232 (73%), Positives = 198/232 (85%)
Frame = +3
Query: 396 NVPMRNNKVTKSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEKLGKAAQKHSHLV 575
NV NK + +RMSW+GPLSSVKLI QGKNLELT VK +VE+K+GKA QKHSHLV
Sbjct: 63 NVKYFENKRGRRSAVRMSWEGPLSSVKLITQGKNLELTDTVKKHVEDKVGKAVQKHSHLV 122
Query: 576 REVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSIDMVSSIIQRKLR 755
REVDVRLSVRGGE GKGPKIRRCEVTLFTKKHGVIRAEEDAE++Y SID+VSSIIQRKLR
Sbjct: 123 REVDVRLSVRGGEFGKGPKIRRCEVTLFTKKHGVIRAEEDAETIYASIDLVSSIIQRKLR 182
Query: 756 KIKEKDSDHGRHMKGFDRLKVRDPEMLVVQEDLETIPQEEEVEDDKSEGFVTDIVRKKFF 935
KIKEK SDHGRHMKGF+RLKVR+P V++D + + + V D+ E ++ ++VR K+F
Sbjct: 183 KIKEKVSDHGRHMKGFNRLKVREPVAEPVKDDTDEV---DGVLGDEDEDYIDEVVRTKYF 239
Query: 936 DMPPLSVTEAIEQLENVDHDFYGFRNEETGEINILYRRKEGGYGIIIPKEDG 1091
DMPPL+V+EAIEQL+NVDHDFYGFRNEETGEINI+Y+RK GGYGIIIPKE+G
Sbjct: 240 DMPPLTVSEAIEQLKNVDHDFYGFRNEETGEINIIYKRKAGGYGIIIPKENG 291
>gb|EMJ19977.1| hypothetical protein PRUPE_ppa009612mg [Prunus persica]
Length = 285
Score = 341 bits (875), Expect = 5e-91
Identities = 172/248 (69%), Positives = 207/248 (83%), Gaps = 5/248 (2%)
Frame = +3
Query: 363 FLNSAFKMYDINVPMR--NNKVTKSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEE 536
F N A + I++ +R N S+ +RMSWDGPLSSVKLI+QG+NLEL+ AVK +VE+
Sbjct: 24 FFNPAKHLKPISIAIRPTNKCHGNSLSVRMSWDGPLSSVKLIVQGRNLELSEAVKKHVED 83
Query: 537 KLGKAAQKHSHLVREVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGS 716
K+GKA QKHSHL RE DVRLSVRGGE GKGP+IRRCEVTLFTKKHGV RAEE+AE++Y S
Sbjct: 84 KVGKAVQKHSHLAREADVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVFRAEEEAETLYAS 143
Query: 717 IDMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDP--EMLVVQEDLETIPQEEEVEDD 890
ID+ SSIIQRKLRKIKEKDSDHGRHMKGF+RLKVR+P +++V +E+ ET+PQEEE +
Sbjct: 144 IDLASSIIQRKLRKIKEKDSDHGRHMKGFNRLKVREPATQIVVEEEEEETVPQEEEGD-- 201
Query: 891 KSEGFVTD-IVRKKFFDMPPLSVTEAIEQLENVDHDFYGFRNEETGEINILYRRKEGGYG 1067
F+ D IVR K+FDMPPL+V EA++QLENVDHDFY FRNEETGEINI+Y+RKEGGYG
Sbjct: 202 ----FINDEIVRMKYFDMPPLTVAEAVDQLENVDHDFYAFRNEETGEINIIYKRKEGGYG 257
Query: 1068 IIIPKEDG 1091
+IIPK +G
Sbjct: 258 LIIPKGNG 265
>ref|XP_003526761.1| PREDICTED: ribosome-binding factor PSRP1, chloroplastic [Glycine max]
Length = 291
Score = 337 bits (864), Expect = 9e-90
Identities = 170/224 (75%), Positives = 194/224 (86%), Gaps = 2/224 (0%)
Frame = +3
Query: 426 KSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEKLGKAAQKHSHLVREVDVRLSVR 605
+S+ RMSWDGPLSSVKLI+QGKNLELT AVK +VE+K+GKA QKHSHLVREVDVRLS+R
Sbjct: 55 RSLSTRMSWDGPLSSVKLIIQGKNLELTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIR 114
Query: 606 GG-ELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSIDMVSSIIQRKLRKIKEKDSDH 782
GG E G+GP+ RRCEVTLFTK+HGV+RAEEDAES YGSID+VSSIIQRKLRKIKEK SDH
Sbjct: 115 GGGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDH 174
Query: 783 GRHMKGFDRLKVRDP-EMLVVQEDLETIPQEEEVEDDKSEGFVTDIVRKKFFDMPPLSVT 959
GRHMKGF+RLKVR+P E L ++ED P+EEE D ++VR K+FDMPPL+V
Sbjct: 175 GRHMKGFNRLKVREPVEQLPMEEDEILSPREEEESID-------EVVRTKYFDMPPLTVA 227
Query: 960 EAIEQLENVDHDFYGFRNEETGEINILYRRKEGGYGIIIPKEDG 1091
EAIEQLENVDHDFYGFRNEETGEINI+Y+RKEGGYG+IIPK DG
Sbjct: 228 EAIEQLENVDHDFYGFRNEETGEINIVYKRKEGGYGLIIPKGDG 271
>gb|EXB78385.1| 30S ribosomal protein 1 [Morus notabilis]
Length = 334
Score = 337 bits (863), Expect = 1e-89
Identities = 170/259 (65%), Positives = 201/259 (77%), Gaps = 16/259 (6%)
Frame = +3
Query: 363 FLNSA--FKMYDINVPMRNNKVTKSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEE 536
FLN K + + RN +RMSWDGPLSSVKLI+QGKNLELT VKS+VEE
Sbjct: 57 FLNPCKILKTVSVEIMPRNKCRGNFRSVRMSWDGPLSSVKLIIQGKNLELTETVKSHVEE 116
Query: 537 KLGKAAQKHSHLVREVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGS 716
K+GKA KHSHLVREVDVRLSVRGGE GKGP+IRRCEVTLFTK+HGV+RAEE+AE++Y S
Sbjct: 117 KVGKAVVKHSHLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKRHGVVRAEEEAETLYAS 176
Query: 717 IDMVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEMLVVQEDLETIPQ--------- 869
ID+ SSIIQRKLRKIKEK+SDHGRHMKGF+RLKVR+P ++E+ ET+P+
Sbjct: 177 IDLASSIIQRKLRKIKEKESDHGRHMKGFNRLKVREPSAPEIKEEEETVPEQTEGKETVP 236
Query: 870 -----EEEVEDDKSEGFVTDIVRKKFFDMPPLSVTEAIEQLENVDHDFYGFRNEETGEIN 1034
EE V + E + IVR K+FDMPPL+V EA++QLENVDHDFYGFRNEETGEIN
Sbjct: 237 EQTEGEETVPLQEEENLIDAIVRTKYFDMPPLTVPEAVQQLENVDHDFYGFRNEETGEIN 296
Query: 1035 ILYRRKEGGYGIIIPKEDG 1091
I+Y+RK GGYG+IIPK +G
Sbjct: 297 IIYKRKAGGYGLIIPKGNG 315
>ref|XP_002317839.1| 30S ribosomal family protein [Populus trichocarpa]
gi|222858512|gb|EEE96059.1| 30S ribosomal family protein
[Populus trichocarpa]
Length = 306
Score = 336 bits (862), Expect = 2e-89
Identities = 167/240 (69%), Positives = 196/240 (81%)
Frame = +3
Query: 363 FLNSAFKMYDINVPMRNNKVTKSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEKL 542
FL ++ R ++MSWDGPL SVKLI+QGKNLELT VK +VE+K+
Sbjct: 50 FLGKNMSFIELGRTARTPLTHGGCSVKMSWDGPLHSVKLIIQGKNLELTDTVKRHVEDKV 109
Query: 543 GKAAQKHSHLVREVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSID 722
GKA QKHSHLVREVDVRLSVRGGELGKGP+IRRCEVTLFT +HGV+RAEEDAE++Y SID
Sbjct: 110 GKAVQKHSHLVREVDVRLSVRGGELGKGPRIRRCEVTLFTNRHGVVRAEEDAETIYASID 169
Query: 723 MVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPEMLVVQEDLETIPQEEEVEDDKSEG 902
+VSSIIQRKLRKIKEK+SDHGRHMKGF+RLKVR+P VV+ D + + Q +EVED
Sbjct: 170 LVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREPVPQVVEGDADEVSQ-QEVEDS---- 224
Query: 903 FVTDIVRKKFFDMPPLSVTEAIEQLENVDHDFYGFRNEETGEINILYRRKEGGYGIIIPK 1082
+ ++VR KFFDMPPL+V+EAIEQLENVDHDFYGFRNEETGEINI+Y+RK GGYG+IIPK
Sbjct: 225 -IEEVVRTKFFDMPPLTVSEAIEQLENVDHDFYGFRNEETGEINIVYKRKAGGYGLIIPK 283
>dbj|BAB11201.1| unnamed protein product [Arabidopsis thaliana]
Length = 365
Score = 336 bits (862), Expect = 2e-89
Identities = 161/235 (68%), Positives = 198/235 (84%)
Frame = +3
Query: 387 YDINVPMRNNKVTKSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEKLGKAAQKHS 566
Y+ +R++ S+ ++MSWDGPL+SVKLI+QGKNLEL+ +K +VEEK+GK+ QKHS
Sbjct: 111 YEDRRQVRHSYCRSSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHS 170
Query: 567 HLVREVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSIDMVSSIIQR 746
HLVREVDVRLSVRGGE GKGP+IRRCEVTLFTKKHGV+RAEEDAE+VY ID+VS+IIQR
Sbjct: 171 HLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYACIDLVSTIIQR 230
Query: 747 KLRKIKEKDSDHGRHMKGFDRLKVRDPEMLVVQEDLETIPQEEEVEDDKSEGFVTDIVRK 926
KLRKIKEKDSDHGRHMKGF+RLKVR+P + V ED+E E+++ + + +IVR
Sbjct: 231 KLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVEDSTDSSVGEEEEEDDLIKEIVRT 290
Query: 927 KFFDMPPLSVTEAIEQLENVDHDFYGFRNEETGEINILYRRKEGGYGIIIPKEDG 1091
K F+MPPL+V EA+EQLE V HDFYGF+NEETGEINI+Y+RKEGGYG+IIPK+DG
Sbjct: 291 KTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDG 345
>ref|NP_568447.1| putative 30S ribosomal protein [Arabidopsis thaliana]
gi|13877771|gb|AAK43963.1|AF370148_1 unknown protein
[Arabidopsis thaliana] gi|29824163|gb|AAP04042.1| unknown
protein [Arabidopsis thaliana]
gi|332005933|gb|AED93316.1| putative 30S ribosomal
protein [Arabidopsis thaliana]
Length = 308
Score = 336 bits (862), Expect = 2e-89
Identities = 161/235 (68%), Positives = 198/235 (84%)
Frame = +3
Query: 387 YDINVPMRNNKVTKSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEKLGKAAQKHS 566
Y+ +R++ S+ ++MSWDGPL+SVKLI+QGKNLEL+ +K +VEEK+GK+ QKHS
Sbjct: 54 YEDRRQVRHSYCRSSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHS 113
Query: 567 HLVREVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSIDMVSSIIQR 746
HLVREVDVRLSVRGGE GKGP+IRRCEVTLFTKKHGV+RAEEDAE+VY ID+VS+IIQR
Sbjct: 114 HLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYACIDLVSTIIQR 173
Query: 747 KLRKIKEKDSDHGRHMKGFDRLKVRDPEMLVVQEDLETIPQEEEVEDDKSEGFVTDIVRK 926
KLRKIKEKDSDHGRHMKGF+RLKVR+P + V ED+E E+++ + + +IVR
Sbjct: 174 KLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVEDSTDSSVGEEEEEDDLIKEIVRT 233
Query: 927 KFFDMPPLSVTEAIEQLENVDHDFYGFRNEETGEINILYRRKEGGYGIIIPKEDG 1091
K F+MPPL+V EA+EQLE V HDFYGF+NEETGEINI+Y+RKEGGYG+IIPK+DG
Sbjct: 234 KTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDG 288
>ref|XP_002872116.1| hypothetical protein ARALYDRAFT_489312 [Arabidopsis lyrata subsp.
lyrata] gi|297317953|gb|EFH48375.1| hypothetical protein
ARALYDRAFT_489312 [Arabidopsis lyrata subsp. lyrata]
Length = 308
Score = 336 bits (861), Expect = 2e-89
Identities = 162/235 (68%), Positives = 197/235 (83%)
Frame = +3
Query: 387 YDINVPMRNNKVTKSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEKLGKAAQKHS 566
YD +R + S+ ++MSWDGPL+SVKLI+QGKNLEL+ +K +VEEK+GK+ QKHS
Sbjct: 54 YDDRRQVRPSCCKSSLAVKMSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHS 113
Query: 567 HLVREVDVRLSVRGGELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSIDMVSSIIQR 746
HLVREVDVRLSVRGGE GKGP+IRRCEVTLFTKKHGV+RAEEDAE+VY ID+VS+IIQR
Sbjct: 114 HLVREVDVRLSVRGGEFGKGPRIRRCEVTLFTKKHGVVRAEEDAETVYACIDLVSTIIQR 173
Query: 747 KLRKIKEKDSDHGRHMKGFDRLKVRDPEMLVVQEDLETIPQEEEVEDDKSEGFVTDIVRK 926
KLRKIKEKDSDHGRHMKGF+RLKVR+P + V ED+E E+++ + + +IVR
Sbjct: 174 KLRKIKEKDSDHGRHMKGFNRLKVREPVIEPVVEDVEDSTDSSLGEEEEEDDLIKEIVRT 233
Query: 927 KFFDMPPLSVTEAIEQLENVDHDFYGFRNEETGEINILYRRKEGGYGIIIPKEDG 1091
K F+MPPL+V EA+EQLE V HDFYGF+NEETGEINI+Y+RKEGGYG+IIPK+DG
Sbjct: 234 KTFEMPPLTVAEAVEQLELVSHDFYGFQNEETGEINIVYKRKEGGYGLIIPKKDG 288
>ref|NP_001241953.1| uncharacterized protein LOC100784915 [Glycine max]
gi|255634767|gb|ACU17745.1| unknown [Glycine max]
Length = 291
Score = 335 bits (860), Expect = 3e-89
Identities = 169/224 (75%), Positives = 192/224 (85%), Gaps = 2/224 (0%)
Frame = +3
Query: 426 KSVGIRMSWDGPLSSVKLILQGKNLELTPAVKSYVEEKLGKAAQKHSHLVREVDVRLSVR 605
+S+ MSWDGPLSSVKL +QGKNLELT AVK +VE+K+GKA QKHSHLVREVDVRLS+R
Sbjct: 55 RSLSAHMSWDGPLSSVKLTIQGKNLELTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIR 114
Query: 606 GG-ELGKGPKIRRCEVTLFTKKHGVIRAEEDAESVYGSIDMVSSIIQRKLRKIKEKDSDH 782
GG E G+GP+ RRCEVTLFTK+HGV+RAEEDAES YGSID+VSSIIQRKLRKIKEK SDH
Sbjct: 115 GGGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSIDLVSSIIQRKLRKIKEKVSDH 174
Query: 783 GRHMKGFDRLKVRDP-EMLVVQEDLETIPQEEEVEDDKSEGFVTDIVRKKFFDMPPLSVT 959
GRHMKGF+RLKVR+P E L V+ED PQEEE D ++VR K+FDMPPL+V
Sbjct: 175 GRHMKGFNRLKVREPVEQLPVEEDEILSPQEEEESID-------EVVRTKYFDMPPLTVA 227
Query: 960 EAIEQLENVDHDFYGFRNEETGEINILYRRKEGGYGIIIPKEDG 1091
EAIEQLENVDHDFYGFRNEETGEINI+Y+RKEGGYG+I+PK DG
Sbjct: 228 EAIEQLENVDHDFYGFRNEETGEINIVYKRKEGGYGLIVPKGDG 271