BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00001084
         (800 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containi...   358   9e-97
ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containi...   358   9e-97
ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containi...   330   5e-88

>ref|XP_006359637.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
           chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 1109

 Score =  358 bits (920), Expect = 9e-97
 Identities = 191/240 (79%), Positives = 202/240 (84%)
 Frame = +2

Query: 29  EVTNECEDAGTDVLQHGGTYSIQTFVTNKFESPDTNQLAPSSNGSLTSVAPGPNEHTESD 208
           +V+NE ED GTDVLQH GT  IQTFVTN  ES DTNQLAPSSNGSLT  A  PN HTESD
Sbjct: 119 KVSNEHEDGGTDVLQHDGTDLIQTFVTNNIESVDTNQLAPSSNGSLTLGASVPNAHTESD 178

Query: 209 AVPSSFVAESNNIYLQENLQGTKMSNILPTEEVRAPGPNAHTESDAVPSSFVAESNNIYL 388
           AVPSSFVAE NNIYLQENL+ TKMSNIL TEEVR P P AHTESDAVPSSFV ES NI L
Sbjct: 179 AVPSSFVAELNNIYLQENLRMTKMSNILTTEEVREPEPIAHTESDAVPSSFVEESKNICL 238

Query: 389 QEHLHETKMSNRLTAEEVSSECSVALFPAININKRIEETMKMDLELMKKDGCKKAHKLVA 568
           QEHLHETKMSN LT EEVSSE SVALFPAINI+ R E+T KMD ELM KDGCKKAHK VA
Sbjct: 239 QEHLHETKMSNILTTEEVSSERSVALFPAINIDNRPEKTKKMDQELMTKDGCKKAHKFVA 298

Query: 569 EDEVNIHNLIFRDSARKELYSFFEASTKSLNGQEALTSHASLQQIGVFSAPTKVSSVRAD 748
           EDEV IHNLIFRDS R++LYSFFEAS+KSLNGQ+ALTSHASLQ IG FS  +KV SVRA+
Sbjct: 299 EDEVTIHNLIFRDSTREDLYSFFEASSKSLNGQDALTSHASLQGIGAFSPASKVFSVRAE 358


>ref|XP_006359636.1| PREDICTED: pentatricopeptide repeat-containing protein MRL1,
           chloroplastic-like isoform X1 [Solanum tuberosum]
          Length = 1140

 Score =  358 bits (920), Expect = 9e-97
 Identities = 191/240 (79%), Positives = 202/240 (84%)
 Frame = +2

Query: 29  EVTNECEDAGTDVLQHGGTYSIQTFVTNKFESPDTNQLAPSSNGSLTSVAPGPNEHTESD 208
           +V+NE ED GTDVLQH GT  IQTFVTN  ES DTNQLAPSSNGSLT  A  PN HTESD
Sbjct: 150 KVSNEHEDGGTDVLQHDGTDLIQTFVTNNIESVDTNQLAPSSNGSLTLGASVPNAHTESD 209

Query: 209 AVPSSFVAESNNIYLQENLQGTKMSNILPTEEVRAPGPNAHTESDAVPSSFVAESNNIYL 388
           AVPSSFVAE NNIYLQENL+ TKMSNIL TEEVR P P AHTESDAVPSSFV ES NI L
Sbjct: 210 AVPSSFVAELNNIYLQENLRMTKMSNILTTEEVREPEPIAHTESDAVPSSFVEESKNICL 269

Query: 389 QEHLHETKMSNRLTAEEVSSECSVALFPAININKRIEETMKMDLELMKKDGCKKAHKLVA 568
           QEHLHETKMSN LT EEVSSE SVALFPAINI+ R E+T KMD ELM KDGCKKAHK VA
Sbjct: 270 QEHLHETKMSNILTTEEVSSERSVALFPAINIDNRPEKTKKMDQELMTKDGCKKAHKFVA 329

Query: 569 EDEVNIHNLIFRDSARKELYSFFEASTKSLNGQEALTSHASLQQIGVFSAPTKVSSVRAD 748
           EDEV IHNLIFRDS R++LYSFFEAS+KSLNGQ+ALTSHASLQ IG FS  +KV SVRA+
Sbjct: 330 EDEVTIHNLIFRDSTREDLYSFFEASSKSLNGQDALTSHASLQGIGAFSPASKVFSVRAE 389


>ref|XP_004231448.1| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
            chloroplastic-like [Solanum lycopersicum]
          Length = 1182

 Score =  330 bits (845), Expect = 5e-88
 Identities = 186/285 (65%), Positives = 199/285 (69%), Gaps = 45/285 (15%)
 Frame = +2

Query: 29   EVTNECEDAGTDVLQHGGTYSIQTFVTNKFESPDTNQLAPSSNGSLTSVAPGPNEHTESD 208
            +V+NE ED   DVLQH GTY IQTFVTN  ES DTNQLAPSSNGSLT  A  PNEHTESD
Sbjct: 147  KVSNEREDGEADVLQHDGTYLIQTFVTNNIESLDTNQLAPSSNGSLTLGASVPNEHTESD 206

Query: 209  AVPSSFVAESNNIYLQENLQGTKMSNILPTEEVRAPGPNAHTESDAVPSSFVAESNNIYL 388
            AVPSSFVA+SNNIYLQEN+Q TKMSNIL TEEVR P P AHTESD VPSSFVAESNNIYL
Sbjct: 207  AVPSSFVADSNNIYLQENIQTTKMSNILTTEEVREPEPIAHTESDVVPSSFVAESNNIYL 266

Query: 389  QE---------------------------------------------HLHETKMSNRLTA 433
            QE                                             HLHETKMSN LT 
Sbjct: 267  QENLRTTKMSNILTTEEVREPEPIAHTESDAVPSSFMEESKNINLQEHLHETKMSNILTT 326

Query: 434  EEVSSECSVALFPAININKRIEETMKMDLELMKKDGCKKAHKLVAEDEVNIHNLIFRDSA 613
            EEVSSE SVALFP INI+ R E+T  MD ELM KD  KKAH+ VAEDEV IHNLIFRDS 
Sbjct: 327  EEVSSERSVALFPTINIDNRTEKTKIMDQELMMKDELKKAHRFVAEDEVIIHNLIFRDST 386

Query: 614  RKELYSFFEASTKSLNGQEALTSHASLQQIGVFSAPTKVSSVRAD 748
            R++LYSFF AS+KSLNGQ+ALTSHAS Q IG FS P+K  SVRA+
Sbjct: 387  REDLYSFFGASSKSLNGQDALTSHASRQGIGTFSPPSKAFSVRAE 431