BLASTX nr result
ID: Atropa21_contig00000734
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00000734
(1352 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350862.1| PREDICTED: transcription initiation factor T... 117 1e-23
ref|XP_006350861.1| PREDICTED: transcription initiation factor T... 117 1e-23
emb|CBI28434.3| unnamed protein product [Vitis vinifera] 105 3e-20
ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261... 105 3e-20
ref|XP_004145234.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 102 4e-19
gb|EPS58304.1| hypothetical protein M569_16511 [Genlisea aurea] 101 6e-19
ref|XP_002521188.1| RNA binding protein, putative [Ricinus commu... 100 2e-18
ref|XP_006602073.1| PREDICTED: transcription initiation factor T... 99 4e-18
gb|ESW18818.1| hypothetical protein PHAVU_006G072900g [Phaseolus... 99 4e-18
ref|XP_006369676.1| hypothetical protein POPTR_0001s288101g, par... 97 1e-17
ref|XP_002298497.1| predicted protein [Populus trichocarpa] 97 1e-17
ref|XP_006379127.1| hypothetical protein POPTR_0009s08040g [Popu... 95 6e-17
ref|XP_002313969.1| predicted protein [Populus trichocarpa] 95 6e-17
ref|XP_006575424.1| PREDICTED: transcription initiation factor T... 93 3e-16
ref|XP_003518322.1| PREDICTED: transcription initiation factor T... 93 3e-16
ref|XP_006281876.1| hypothetical protein CARUB_v10028073mg, part... 92 5e-16
ref|XP_006401076.1| hypothetical protein EUTSA_v10012621mg [Eutr... 91 9e-16
ref|NP_851215.1| TBP-associated factor 15B [Arabidopsis thaliana... 91 1e-15
ref|XP_003599332.1| HIV Tat-specific factor-like protein [Medica... 90 2e-15
ref|XP_002866269.1| hypothetical protein ARALYDRAFT_495966 [Arab... 90 2e-15
>ref|XP_006350862.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
isoform X2 [Solanum tuberosum]
gi|565368460|ref|XP_006350863.1| PREDICTED: transcription
initiation factor TFIID subunit 15b-like isoform X3
[Solanum tuberosum]
Length = 450
Score = 117 bits (293), Expect = 1e-23
Identities = 61/90 (67%), Positives = 62/90 (68%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 1171
NNKGDAVLSYEDPSAAHSAG FFNNHDFRGYKI+VAMAEKSAPKP PAF
Sbjct: 363 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKITVAMAEKSAPKPPPAFGSGRGGRGGYG 422
Query: 1170 XXXXXXXXXXXXGCSGPDRQFHGGNRSRPY 1081
SGPDRQ HGGNRSRPY
Sbjct: 423 GGRRDNYRDGGG--SGPDRQSHGGNRSRPY 450
>ref|XP_006350861.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
isoform X1 [Solanum tuberosum]
Length = 461
Score = 117 bits (293), Expect = 1e-23
Identities = 61/90 (67%), Positives = 62/90 (68%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 1171
NNKGDAVLSYEDPSAAHSAG FFNNHDFRGYKI+VAMAEKSAPKP PAF
Sbjct: 374 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKITVAMAEKSAPKPPPAFGSGRGGRGGYG 433
Query: 1170 XXXXXXXXXXXXGCSGPDRQFHGGNRSRPY 1081
SGPDRQ HGGNRSRPY
Sbjct: 434 GGRRDNYRDGGG--SGPDRQSHGGNRSRPY 461
>emb|CBI28434.3| unnamed protein product [Vitis vinifera]
Length = 873
Score = 105 bits (263), Expect = 3e-20
Identities = 53/90 (58%), Positives = 58/90 (64%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 1171
NNKGDA LSYEDPSAAHSAG F+NN++ RGYKI+VAMAEKSAP+ PAF
Sbjct: 784 NNKGDACLSYEDPSAAHSAGGFYNNYEMRGYKINVAMAEKSAPRAPPAFGHGGGGRGGYG 843
Query: 1170 XXXXXXXXXXXXGCSGPDRQFHGGNRSRPY 1081
SGPDR HGGNRSRPY
Sbjct: 844 GGDRRRDNYRDNAGSGPDRHHHGGNRSRPY 873
>ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261263 [Vitis vinifera]
Length = 462
Score = 105 bits (263), Expect = 3e-20
Identities = 53/90 (58%), Positives = 58/90 (64%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 1171
NNKGDA LSYEDPSAAHSAG F+NN++ RGYKI+VAMAEKSAP+ PAF
Sbjct: 373 NNKGDACLSYEDPSAAHSAGGFYNNYEMRGYKINVAMAEKSAPRAPPAFGHGGGGRGGYG 432
Query: 1170 XXXXXXXXXXXXGCSGPDRQFHGGNRSRPY 1081
SGPDR HGGNRSRPY
Sbjct: 433 GGDRRRDNYRDNAGSGPDRHHHGGNRSRPY 462
>ref|XP_004145234.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101203985
[Cucumis sativus]
Length = 465
Score = 102 bits (254), Expect = 4e-19
Identities = 52/90 (57%), Positives = 58/90 (64%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 1171
NNKGDA +SYEDPSAAHSAG F+NN+D RGY I+VAMAEKSAP+ PA+
Sbjct: 376 NNKGDACVSYEDPSAAHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPAYNHGGGGRGGYG 435
Query: 1170 XXXXXXXXXXXXGCSGPDRQFHGGNRSRPY 1081
G SGPDR HGGNRSRPY
Sbjct: 436 GGGDRRRDSYRDGGSGPDRHQHGGNRSRPY 465
>gb|EPS58304.1| hypothetical protein M569_16511 [Genlisea aurea]
Length = 371
Score = 101 bits (252), Expect = 6e-19
Identities = 54/93 (58%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
Frame = -3
Query: 1347 NKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAF----XXXXXXXX 1180
NKGDAVLSYEDPSAAHSAG FFN H+ RG+KI V+MAEKSAPK AP++
Sbjct: 279 NKGDAVLSYEDPSAAHSAGGFFNGHEMRGHKIKVSMAEKSAPKAAPSYGSGGGGGGRGNY 338
Query: 1179 XXXXXXXXXXXXXXXGCSGPDRQFHGGNRSRPY 1081
G SGPDR FHGGNRSRPY
Sbjct: 339 GGGDRRRDNYRGGGGGSSGPDRNFHGGNRSRPY 371
>ref|XP_002521188.1| RNA binding protein, putative [Ricinus communis]
gi|223539602|gb|EEF41188.1| RNA binding protein, putative
[Ricinus communis]
Length = 437
Score = 99.8 bits (247), Expect = 2e-18
Identities = 52/90 (57%), Positives = 60/90 (66%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 1171
NNKGDAVLSYEDPSAAHSAG F+NN+D RGYKI+VAMAEK+AP+ P++
Sbjct: 351 NNKGDAVLSYEDPSAAHSAGGFYNNYDMRGYKINVAMAEKTAPR-QPSYDHGGGRGGYGG 409
Query: 1170 XXXXXXXXXXXXGCSGPDRQFHGGNRSRPY 1081
SGPDR +HGGNRSRPY
Sbjct: 410 GDRRRENNRDGG--SGPDRHYHGGNRSRPY 437
>ref|XP_006602073.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
isoform X1 [Glycine max]
Length = 508
Score = 99.0 bits (245), Expect = 4e-18
Identities = 53/90 (58%), Positives = 59/90 (65%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 1171
NNKGDA L+YEDPSAAHSAG F+NN+D RGYKISVAMAEKSAP+ PA+
Sbjct: 420 NNKGDACLAYEDPSAAHSAGGFYNNYDLRGYKISVAMAEKSAPRAPPAYNQGGNRGGYGG 479
Query: 1170 XXXXXXXXXXXXGCSGPDRQFHGGNRSRPY 1081
G SGPDR+ H GNRSRPY
Sbjct: 480 DRRRDNYRDGGGG-SGPDRRDHYGNRSRPY 508
>gb|ESW18818.1| hypothetical protein PHAVU_006G072900g [Phaseolus vulgaris]
Length = 517
Score = 99.0 bits (245), Expect = 4e-18
Identities = 52/90 (57%), Positives = 58/90 (64%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 1171
NNKGDA L+YEDPSAAHSAG F+NN+D RGYKISVAMAEKSAP+ PA+
Sbjct: 430 NNKGDACLAYEDPSAAHSAGGFYNNYDLRGYKISVAMAEKSAPRAPPAYNQGGNRGGYGG 489
Query: 1170 XXXXXXXXXXXXGCSGPDRQFHGGNRSRPY 1081
SGPDR+ H GNRSRPY
Sbjct: 490 DRRRENYRDGGG--SGPDRRDHYGNRSRPY 517
>ref|XP_006369676.1| hypothetical protein POPTR_0001s288101g, partial [Populus
trichocarpa] gi|550348413|gb|ERP66245.1| hypothetical
protein POPTR_0001s288101g, partial [Populus trichocarpa]
Length = 275
Score = 97.4 bits (241), Expect = 1e-17
Identities = 53/90 (58%), Positives = 58/90 (64%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 1171
NNKGDA L+YEDPSAAHSAG F+NN+DFRGYKI+VAMAEKSAP+ PA
Sbjct: 188 NNKGDACLAYEDPSAAHSAGGFYNNYDFRGYKINVAMAEKSAPRQ-PAHDHGGGRGGYGG 246
Query: 1170 XXXXXXXXXXXXGCSGPDRQFHGGNRSRPY 1081
SGPDR HGGNRSRPY
Sbjct: 247 GGRRRDNYRDGGN-SGPDRHQHGGNRSRPY 275
>ref|XP_002298497.1| predicted protein [Populus trichocarpa]
Length = 399
Score = 97.4 bits (241), Expect = 1e-17
Identities = 53/90 (58%), Positives = 58/90 (64%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 1171
NNKGDA L+YEDPSAAHSAG F+NN+DFRGYKI+VAMAEKSAP+ PA
Sbjct: 312 NNKGDACLAYEDPSAAHSAGGFYNNYDFRGYKINVAMAEKSAPRQ-PAHDHGGGRGGYGG 370
Query: 1170 XXXXXXXXXXXXGCSGPDRQFHGGNRSRPY 1081
SGPDR HGGNRSRPY
Sbjct: 371 GGRRRDNYRDGGN-SGPDRHQHGGNRSRPY 399
>ref|XP_006379127.1| hypothetical protein POPTR_0009s08040g [Populus trichocarpa]
gi|550331275|gb|ERP56924.1| hypothetical protein
POPTR_0009s08040g [Populus trichocarpa]
Length = 443
Score = 95.1 bits (235), Expect = 6e-17
Identities = 52/90 (57%), Positives = 57/90 (63%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 1171
NNKGDA L+YEDPSAAHSAG F+NN+D RGYKI+VAMAEKSAP+ PA
Sbjct: 358 NNKGDACLAYEDPSAAHSAGGFYNNYDMRGYKINVAMAEKSAPRQ-PAHDHGGGRGGYGG 416
Query: 1170 XXXXXXXXXXXXGCSGPDRQFHGGNRSRPY 1081
SGPDR HGGNRSRPY
Sbjct: 417 GDRRNYRDAGN---SGPDRHQHGGNRSRPY 443
>ref|XP_002313969.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 95.1 bits (235), Expect = 6e-17
Identities = 52/90 (57%), Positives = 57/90 (63%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 1171
NNKGDA L+YEDPSAAHSAG F+NN+D RGYKI+VAMAEKSAP+ PA
Sbjct: 137 NNKGDACLAYEDPSAAHSAGGFYNNYDMRGYKINVAMAEKSAPRQ-PAHDHGGGRGGYGG 195
Query: 1170 XXXXXXXXXXXXGCSGPDRQFHGGNRSRPY 1081
SGPDR HGGNRSRPY
Sbjct: 196 GDRRNYRDAGN---SGPDRHQHGGNRSRPY 222
>ref|XP_006575424.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
isoform X2 [Glycine max]
Length = 390
Score = 92.8 bits (229), Expect = 3e-16
Identities = 52/91 (57%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 1171
NNKGD L YEDPSAAHSAG F+NN+D RGYKI VAMAEKSAPK PA+
Sbjct: 302 NNKGDGCLVYEDPSAAHSAGSFYNNYDLRGYKIGVAMAEKSAPKAPPAY--NHGGNRSGY 359
Query: 1170 XXXXXXXXXXXXGCSGPDRQ-FHGGNRSRPY 1081
G SGPDR+ +GGNRSRPY
Sbjct: 360 GGDRRRDNYRDGGSSGPDRRDNYGGNRSRPY 390
>ref|XP_003518322.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
isoform X1 [Glycine max]
Length = 404
Score = 92.8 bits (229), Expect = 3e-16
Identities = 52/91 (57%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 1171
NNKGD L YEDPSAAHSAG F+NN+D RGYKI VAMAEKSAPK PA+
Sbjct: 316 NNKGDGCLVYEDPSAAHSAGSFYNNYDLRGYKIGVAMAEKSAPKAPPAY--NHGGNRSGY 373
Query: 1170 XXXXXXXXXXXXGCSGPDRQ-FHGGNRSRPY 1081
G SGPDR+ +GGNRSRPY
Sbjct: 374 GGDRRRDNYRDGGSSGPDRRDNYGGNRSRPY 404
>ref|XP_006281876.1| hypothetical protein CARUB_v10028073mg, partial [Capsella rubella]
gi|482550580|gb|EOA14774.1| hypothetical protein
CARUB_v10028073mg, partial [Capsella rubella]
Length = 918
Score = 92.0 bits (227), Expect = 5e-16
Identities = 51/91 (56%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 1171
N+KGDA L+YEDPSAAHSAG FFNN++ RG KISV MAEKSAP+ AP F
Sbjct: 829 NHKGDACLAYEDPSAAHSAGGFFNNYEMRGSKISVTMAEKSAPR-APTFDQRGGGRGGGG 887
Query: 1170 XXXXXXXXXXXXGC-SGPDRQFHGGNRSRPY 1081
SGPDR HGGNRSRPY
Sbjct: 888 GYGGGGGDRRRDNYGSGPDRNHHGGNRSRPY 918
>ref|XP_006401076.1| hypothetical protein EUTSA_v10012621mg [Eutrema salsugineum]
gi|557102166|gb|ESQ42529.1| hypothetical protein
EUTSA_v10012621mg [Eutrema salsugineum]
Length = 904
Score = 91.3 bits (225), Expect = 9e-16
Identities = 50/93 (53%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Frame = -3
Query: 1347 NKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAF----XXXXXXXX 1180
NKGDA L+YEDPSAAHSAG FFNN++ RG+KI V+MA KSAP+ APAF
Sbjct: 813 NKGDACLTYEDPSAAHSAGGFFNNYEMRGHKIGVSMAAKSAPR-APAFDQRGGGGRGGGG 871
Query: 1179 XXXXXXXXXXXXXXXGCSGPDRQFHGGNRSRPY 1081
SGPDR +HGGNRSRPY
Sbjct: 872 GGGGGYGGGDRRRDNYGSGPDRNYHGGNRSRPY 904
>ref|NP_851215.1| TBP-associated factor 15B [Arabidopsis thaliana]
gi|30697077|ref|NP_568879.3| TBP-associated factor 15B
[Arabidopsis thaliana]
gi|75332298|sp|Q94KD0.1|TA15B_ARATH RecName:
Full=Transcription initiation factor TFIID subunit 15b;
AltName: Full=TBP-associated factor 15b; Short=AtTAF15b
gi|14194175|gb|AAK56282.1|AF367294_1 AT5g58470/mqj2_60
[Arabidopsis thaliana] gi|18700145|gb|AAL77684.1|
AT5g58470/mqj2_60 [Arabidopsis thaliana]
gi|222423096|dbj|BAH19528.1| AT5G58470 [Arabidopsis
thaliana] gi|332009673|gb|AED97056.1| TBP-associated
factor 15B [Arabidopsis thaliana]
gi|332009674|gb|AED97057.1| TBP-associated factor 15B
[Arabidopsis thaliana]
Length = 422
Score = 90.9 bits (224), Expect = 1e-15
Identities = 51/92 (55%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAF--XXXXXXXXX 1177
N KGDA L+YEDPSAAHSAG FFNN++ RG KISV MAEKSAP+ AP F
Sbjct: 332 NYKGDACLAYEDPSAAHSAGGFFNNYEMRGNKISVTMAEKSAPR-APTFDQRGGGRGGGG 390
Query: 1176 XXXXXXXXXXXXXXGCSGPDRQFHGGNRSRPY 1081
SGPDR HGGNRSRPY
Sbjct: 391 GGYGGGGGDRRRDNYSSGPDRNHHGGNRSRPY 422
>ref|XP_003599332.1| HIV Tat-specific factor-like protein [Medicago truncatula]
gi|355488380|gb|AES69583.1| HIV Tat-specific factor-like
protein [Medicago truncatula]
Length = 473
Score = 89.7 bits (221), Expect = 2e-15
Identities = 50/90 (55%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Frame = -3
Query: 1347 NKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXXX 1168
NKGDA L+YEDPSAAHSAG F+N++D RGYKI VAMAEKSAP+ PA
Sbjct: 392 NKGDACLAYEDPSAAHSAGGFYNDYDLRGYKIGVAMAEKSAPRAPPA--------NNHGG 443
Query: 1167 XXXXXXXXXXXGCSGPDRQFH-GGNRSRPY 1081
SGPDR+ H GGNRSRPY
Sbjct: 444 NRGGYGGDRRRDNSGPDRRDHYGGNRSRPY 473
>ref|XP_002866269.1| hypothetical protein ARALYDRAFT_495966 [Arabidopsis lyrata subsp.
lyrata] gi|297312104|gb|EFH42528.1| hypothetical protein
ARALYDRAFT_495966 [Arabidopsis lyrata subsp. lyrata]
Length = 428
Score = 89.7 bits (221), Expect = 2e-15
Identities = 51/95 (53%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Frame = -3
Query: 1350 NNKGDAVLSYEDPSAAHSAGRFFNNHDFRGYKISVAMAEKSAPKPAPAF-----XXXXXX 1186
NNKGDA L+YEDPSAAHSAG FFNN++ RG KISV MA KSAP+ AP F
Sbjct: 335 NNKGDACLAYEDPSAAHSAGGFFNNYEMRGNKISVTMAAKSAPR-APTFDQRGGGRGGGG 393
Query: 1185 XXXXXXXXXXXXXXXXXGCSGPDRQFHGGNRSRPY 1081
SGPDR HGGNRSRPY
Sbjct: 394 GGGGGYGGGGGDRRRDNYGSGPDRNHHGGNRSRPY 428