BLASTX nr result

ID: Atropa21_contig00000280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00000280
         (1254 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356979.1| PREDICTED: translocase of chloroplast 159, c...   460   e-127
ref|XP_004229571.1| PREDICTED: translocase of chloroplast 159, c...   387   e-105

>ref|XP_006356979.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like
            [Solanum tuberosum]
          Length = 1361

 Score =  460 bits (1183), Expect = e-127
 Identities = 277/463 (59%), Positives = 304/463 (65%), Gaps = 46/463 (9%)
 Frame = -3

Query: 1252 DREIVEGHDSNDEYSDKDVSLAR--------------TTVVNSAIPLIPIRAQLSWDSED 1115
            DR I EGH    E+SD    +                T VV+SAI  IPI AQLSWDSED
Sbjct: 146  DRGIDEGHG---EFSDSPFVVDELATGESMDGSDKEGTRVVDSAIRGIPI-AQLSWDSED 201

Query: 1114 -EYLGTGVLEDNDGSGAIRIPNAVVLERLDSTPKVRIXXXXXXXXXXXXSANVIQP---- 950
             EYL TGVLEDND SG  RIPNAVVL+RLDS PKVRI              N IQ     
Sbjct: 202  DEYLSTGVLEDNDVSGVFRIPNAVVLDRLDSAPKVRISDVSDYESESE---NAIQSGMEE 258

Query: 949  --------HMVLGSNSKEEDKTEIDTVQNFIMEGGEANDTFEGGKVVYQVASKESILLGE 794
                     MVLGS+S EEDK E+DTVQNFI +GG ANDT EGGK +YQVASK+S LLG+
Sbjct: 259  DLIITKNVEMVLGSDSTEEDKVEVDTVQNFITDGGAANDTLEGGKNLYQVASKKSTLLGQ 318

Query: 793  ELDNDEKLIAEASQILDSSAEAKSEDSFHDIKPSDTTYNRPGDENRVSNFGADELNSGNX 614
            ELDNDE+L+AE SQILDSS EAKS DS  D+KPSDT Y+ P +ENR S FGADEL+SGN 
Sbjct: 319  ELDNDEELLAEESQILDSSVEAKSADSSRDVKPSDTAYSSPMEENRESKFGADELDSGNS 378

Query: 613  XXXXXXXXEDE---------MYQGSDHQDSASRSETEFDHKPIKCSEVESLKCTEISVPP 461
                     D          +YQGSD QD A+R+ETE  H+PIK SE ESL+CT+ISVPP
Sbjct: 379  IILLTGASGDSQKSESKEDGVYQGSDCQDIATRTETESFHEPIKDSEPESLECTDISVPP 438

Query: 460  TAEEQVYXXXXXXXXXXXXXTIEDE---LSDKTQHTEICLNPDLETNSKDIDPVKLFKNE 290
            TAEEQVY               ED+   LSDKTQH E CLNPDLE N K ID VKLFKNE
Sbjct: 439  TAEEQVYSSASSSSDVTWSSRAEDDLPKLSDKTQHREACLNPDLEANCKVIDTVKLFKNE 498

Query: 289  E-DLLHENDESLTFDGSGGMKLIIEQLDQQIANADYDGEVSQGHLPKVDGEIVT------ 131
            E   LHENDESLTF GSGGMKLII+QLDQQIA  DYDGEVS+GHLPKVDGEIVT      
Sbjct: 499  EVPFLHENDESLTFVGSGGMKLIIDQLDQQIATTDYDGEVSEGHLPKVDGEIVTDSDEEV 558

Query: 130  DTDEESEENEMFDXXXXXXXXXXXAGVGPEGRNVTIPSADGTQ 2
            DTDEESEENEMFD             VG EG NV+IPSADGT+
Sbjct: 559  DTDEESEENEMFDAEALAALLRAATVVGHEGGNVSIPSADGTR 601


>ref|XP_004229571.1| PREDICTED: translocase of chloroplast 159, chloroplastic-like
            [Solanum lycopersicum]
          Length = 1162

 Score =  387 bits (995), Expect = e-105
 Identities = 215/331 (64%), Positives = 239/331 (72%), Gaps = 16/331 (4%)
 Frame = -3

Query: 946  MVLGSNSKEEDKTEIDTVQNFIMEGGEANDTFEGGKVVYQVASKESILLGEELDNDEKLI 767
            MVL S+S E+DK EIDTVQNFI EGGEAN T EGG+ +YQVASKES LLG+ELDND+ L+
Sbjct: 73   MVLDSDSIEDDKAEIDTVQNFITEGGEANYTLEGGRDLYQVASKESTLLGQELDNDKMLL 132

Query: 766  AEASQILDSSAEAKSEDSFHDIKPSDTTYNRPGDENRVSNFGADELNSGNXXXXXXXXXE 587
            AE SQILDSS E+KS DS   +KPSDT Y+ P +ENRVS FGAD+LNSGN          
Sbjct: 133  AEESQILDSSVESKSADSSRGVKPSDTAYSSPREENRVSKFGADDLNSGNSIILHTGASG 192

Query: 586  DE---------MYQGSDHQDSASRSETEFDHKPIKCSEVESLKCTEISVPPTAEEQVYXX 434
            D          +YQGSD QD A+R+ETE  H+PIK SE ESL+C +ISVP TAEEQVY  
Sbjct: 193  DSQKSESKEDGVYQGSDCQDIATRTETESYHEPIKDSEAESLECIDISVPSTAEEQVYSS 252

Query: 433  XXXXXXXXXXXTIEDELSDKTQHTEICLNPDLETNSKDIDPVKLFKNEEDL-LHENDESL 257
                        +  +LSDKTQH E  LNPDLE   KDID VKLFKNEE L LHENDESL
Sbjct: 253  SDVTWSTRAEDDL-PKLSDKTQHREARLNPDLEAKCKDIDTVKLFKNEEALFLHENDESL 311

Query: 256  TFDGSGGMKLIIEQLDQQIANADYDGEVSQGHLPKVDGEIVT------DTDEESEENEMF 95
            TFDGSGGMKLII+Q DQQIANADYDGEVS+GHLPKVD EIVT      DTDEESEENEMF
Sbjct: 312  TFDGSGGMKLIIDQSDQQIANADYDGEVSEGHLPKVDAEIVTDLAEEVDTDEESEENEMF 371

Query: 94   DXXXXXXXXXXXAGVGPEGRNVTIPSADGTQ 2
            D            GVGPEGR+V+IPSADGTQ
Sbjct: 372  DAEALAMLLRAATGVGPEGRSVSIPSADGTQ 402


Top