BLASTX nr result

ID: Atractylodes22_contig00056973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00056973
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...    86   3e-15
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    78   7e-13
ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    70   1e-10
gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK...    70   1e-10
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    55   8e-06

>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/115 (41%), Positives = 71/115 (61%)
 Frame = +3

Query: 12  ER*LRMVVLGDDETLNELGEVVAVEMNEGDGAFFLGKGGDEALECNSMGLFAWLEERKFT 191
           ER LR+++LG+ E LN+ GE++A+E  + D         +  +EC SMG+   + E +  
Sbjct: 332 ERALRVLILGEGEALNDEGEIMAMEAVQPDSE------EEIEVECKSMGVLGSMGEHR-- 383

Query: 192 KSNTLRLEGIIQGILVEVLVDSGASHNFISPKVATVLELPVELGKTMGIRLGDGH 356
              T+++EG I+ + V VL+DSGASHNFISP+V T L L +       I+LGDGH
Sbjct: 384 ---TMKIEGKIENVDVLVLIDSGASHNFISPQVTTALGLTITASVAKHIKLGDGH 435


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 46/116 (39%), Positives = 70/116 (60%)
 Frame = +3

Query: 9   VER*LRMVVLGDDETLNELGEVVAVEMNEGDGAFFLGKGGDEALECNSMGLFAWLEERKF 188
           +ER LR+++LG+ ET+ + GE+V+++         +    +  +EC  MG+   + E   
Sbjct: 347 LERALRVLILGEGETMTKEGEIVSMK------DVTVESEEEVEVECKLMGVLGSMGE--- 397

Query: 189 TKSNTLRLEGIIQGILVEVLVDSGASHNFISPKVATVLELPVELGKTMGIRLGDGH 356
             S+T+R+EG I  + + VL+DSGASHNFISPKV T L L +       I+LGDGH
Sbjct: 398 --SHTMRVEGKIHNVDLLVLIDSGASHNFISPKVTTALGLVITPTVAKSIKLGDGH 451


>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
 Frame = +3

Query: 12   ER*LRMVVLGDDETLNELGEVVAVEMNEGDGAFFLGKGGDEA-LECNSMGLFAWLEERKF 188
            E+ LR+++LG+ E +NE GE+V++E  E      L +  +E   EC  +G+   + E   
Sbjct: 957  EKSLRVLILGEGEGVNEEGEIVSLETQE-----VLEEEEEEIESECKVIGVLGSMGEY-- 1009

Query: 189  TKSNTLRLEGIIQGILVEVLVDSGASHNFISPKVATVLELPVELGKTMGIRLGDGH 356
               NT+++ G ++ I V VLVDSGA+HNFIS K+ + L L +       I+LGDGH
Sbjct: 1010 ---NTMKIGGKLENIDVVVLVDSGATHNFISAKLTSALGLTITPMAARKIKLGDGH 1062


>gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK46949.1| unknown
           [Medicago truncatula]
          Length = 185

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
 Frame = +3

Query: 12  ER*LRMVVLGDDETLNELGEVVAVEMNEGDGAFFLGKGGDEA-LECNSMGLFAWLEERKF 188
           E+ LR+++LG+ E +NE GE+V++E  E      L +  +E   EC  +G+   + E   
Sbjct: 26  EKSLRVLILGEGEGVNEEGEIVSLETQE-----VLEEEEEEIESECKVIGVLGSMGEY-- 78

Query: 189 TKSNTLRLEGIIQGILVEVLVDSGASHNFISPKVATVLELPVELGKTMGIRLGDGH 356
              NT+++ G ++ I V VLVDSGA+HNFIS K+ + L L +       I+LGDGH
Sbjct: 79  ---NTMKIGGKLENIDVVVLVDSGATHNFISAKLTSALGLTITPMAARKIKLGDGH 131


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
 Frame = +3

Query: 21  LRMVVLGDDETLNELGEVVAVEMN---EGDGAFFLGKGGDEALECNSMGLFAWLEERKFT 191
           LR++VL +DE     G+++AVE++   EGDG   +       +E   +G          +
Sbjct: 131 LRVLVLEEDEEGEPEGKLLAVEVDDEEEGDGEMCM-------MEFFHLG---------HS 174

Query: 192 KSNTLRLEGIIQGILVEVLVDSGASHNFISPKVATVLELPVELGKTMGIRLGDG 353
           +  +++L G+I+ + V VLVDSGA+HNFIS ++   +   V     M I+LGDG
Sbjct: 175 RPQSIKLMGVIKEVPVVVLVDSGATHNFISQQLVHKMNWAVVDTPCMSIKLGDG 228


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