BLASTX nr result

ID: Atractylodes22_contig00054911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054911
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   171   6e-41
ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...   159   3e-37
ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [...   156   2e-36
ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35
ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...   149   2e-34

>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score =  171 bits (433), Expect = 6e-41
 Identities = 85/116 (73%), Positives = 102/116 (87%)
 Frame = -3

Query: 350  CVNNAARLLETILQNSDTCRVFIEKKGVEAVLQLFTLXXXXXXXXXXXSIAVAFKNFSPH 171
            C++NAARLLETILQN+DTCR+F+EKKG+EAVLQLFTL           SI+VAF+NFSP 
Sbjct: 1113 CISNAARLLETILQNADTCRIFVEKKGIEAVLQLFTLPLMPLSVSVGQSISVAFRNFSPQ 1172

Query: 170  HSASLARALCSFVREHLKLTNELLISLGGMQLAQVEDAKRTKVLRCLSSLEGILSL 3
            HSASLARA+C F+REHLKLTNELL+S+GG QLA+VE+AK+TKVL+CL+SLEGILSL
Sbjct: 1173 HSASLARAVCLFLREHLKLTNELLLSVGGAQLAEVENAKQTKVLKCLASLEGILSL 1228


>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
            predicted protein [Populus trichocarpa]
          Length = 3728

 Score =  159 bits (401), Expect = 3e-37
 Identities = 80/116 (68%), Positives = 94/116 (81%)
 Frame = -3

Query: 350  CVNNAARLLETILQNSDTCRVFIEKKGVEAVLQLFTLXXXXXXXXXXXSIAVAFKNFSPH 171
            C++N ARLLETILQNSDTCR+F+EKKG++AVLQLFTL            I+VAFKNFSP 
Sbjct: 750  CLSNVARLLETILQNSDTCRIFVEKKGIDAVLQLFTLPLMPLSTPIGQIISVAFKNFSPQ 809

Query: 170  HSASLARALCSFVREHLKLTNELLISLGGMQLAQVEDAKRTKVLRCLSSLEGILSL 3
            HSASLAR++C+F+REHLK TNELL+S+GG  LA VE A + KVLR LSSLEGILSL
Sbjct: 810  HSASLARSVCAFLREHLKSTNELLVSIGGAHLAVVESANQAKVLRYLSSLEGILSL 865


>ref|XP_002522774.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223538012|gb|EEF39625.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3691

 Score =  156 bits (394), Expect = 2e-36
 Identities = 80/116 (68%), Positives = 95/116 (81%)
 Frame = -3

Query: 350  CVNNAARLLETILQNSDTCRVFIEKKGVEAVLQLFTLXXXXXXXXXXXSIAVAFKNFSPH 171
            CV+NAARLLETILQN+DTCR+FIEKKG++AVLQL  L           SI++AFKNFS  
Sbjct: 750  CVSNAARLLETILQNADTCRIFIEKKGIDAVLQLLNLPLMPLSASIGQSISIAFKNFSQQ 809

Query: 170  HSASLARALCSFVREHLKLTNELLISLGGMQLAQVEDAKRTKVLRCLSSLEGILSL 3
            HSASL+RA+CSF+REHLK TNELL+S+GG QLA VE A +TKVLR L+SLEG+LSL
Sbjct: 810  HSASLSRAVCSFLREHLKATNELLVSVGGTQLATVESANQTKVLRYLASLEGMLSL 865


>ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|222859846|gb|EEE97393.1|
            predicted protein [Populus trichocarpa]
          Length = 3663

 Score =  152 bits (383), Expect = 4e-35
 Identities = 77/116 (66%), Positives = 91/116 (78%)
 Frame = -3

Query: 350  CVNNAARLLETILQNSDTCRVFIEKKGVEAVLQLFTLXXXXXXXXXXXSIAVAFKNFSPH 171
            C++N ARLLET+LQNSDTC +F+EKKG++AVLQLFTL            I+VAFKNFS  
Sbjct: 750  CLSNVARLLETVLQNSDTCHIFVEKKGIDAVLQLFTLPLMPISTSIGQIISVAFKNFSHQ 809

Query: 170  HSASLARALCSFVREHLKLTNELLISLGGMQLAQVEDAKRTKVLRCLSSLEGILSL 3
            HSASLARA+C+F+REHLK TNELL+S+ G  L  VE AK+ KVLR LSSLEGILSL
Sbjct: 810  HSASLARAVCAFLREHLKSTNELLVSVAGTHLGVVESAKQAKVLRYLSSLEGILSL 865


>ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3739

 Score =  149 bits (376), Expect = 2e-34
 Identities = 77/116 (66%), Positives = 91/116 (78%)
 Frame = -3

Query: 350  CVNNAARLLETILQNSDTCRVFIEKKGVEAVLQLFTLXXXXXXXXXXXSIAVAFKNFSPH 171
            CVNN ARLLETILQN+DTCR+F+EKKG+EA+LQL TL           SI+VAFKNFSP 
Sbjct: 750  CVNNIARLLETILQNADTCRIFVEKKGIEAILQLVTLPLMPPSVSVGQSISVAFKNFSPQ 809

Query: 170  HSASLARALCSFVREHLKLTNELLISLGGMQLAQVEDAKRTKVLRCLSSLEGILSL 3
            H  SLARA+CSF+REHLK  NELL  +GG QLA VE AK+TKVL+ L+SLE +L+L
Sbjct: 810  HYVSLARAVCSFLREHLKSINELLDLVGGTQLALVESAKQTKVLKYLASLEAVLTL 865


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