BLASTX nr result

ID: Atractylodes22_contig00054544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00054544
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309319.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_002324568.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002523545.1| conserved hypothetical protein [Ricinus comm...    67   1e-09
gb|AFK34000.1| unknown [Lotus japonicus]                               62   4e-08
ref|XP_004139270.1| PREDICTED: uncharacterized protein LOC101211...    60   2e-07

>ref|XP_002309319.1| predicted protein [Populus trichocarpa] gi|222855295|gb|EEE92842.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = +3

Query: 39  CITYGDAEITRRSYHRNCNCALHKMRGKCSH-VSSVANVSFPFRRAWSEGSLTL 197
           C++ G+  I RR YHRNC+CALHK +  CSH +S   NVS+P +R WSEGSL L
Sbjct: 17  CLSGGEMGIDRRPYHRNCSCALHKSKENCSHAMSRYKNVSYPIKRCWSEGSLAL 70


>ref|XP_002324568.1| predicted protein [Populus trichocarpa] gi|222866002|gb|EEF03133.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
 Frame = +3

Query: 39  CITYGDAEITRRSYHRNCNCALHKMRGKCSH-VSSVANVSFPFRRAWSEGSLTL 197
           C++ GD  I RR YHRNC CALHK +  C H +    NVS+P +R+WSEGSL L
Sbjct: 17  CLSSGDMGIDRRPYHRNCRCALHKSKENCPHALPRCKNVSYPIKRSWSEGSLAL 70


>ref|XP_002523545.1| conserved hypothetical protein [Ricinus communis]
           gi|223537252|gb|EEF38884.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 131

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 32/55 (58%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
 Frame = +3

Query: 39  CITYGDAEITRRSYHRNCNCALH-KMRGKCSH-VSSVANVSFPFRRAWSEGSLTL 197
           C++ GD  I RR YHRNC CALH K +  C H +S   NVS+P RRAWSEG L+L
Sbjct: 17  CLSGGDMGIERRPYHRNCRCALHNKSKDNCPHGMSKCKNVSYPIRRAWSEGCLSL 71


>gb|AFK34000.1| unknown [Lotus japonicus]
          Length = 120

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/52 (55%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = +3

Query: 39  CITYGDAEITRRSYHRNCNCALHKMRGKCSH-VSSVANVSFPFRRAWSEGSL 191
           CI+  D  + RR YHRNC CALH     C H +    NVS+P RRAWSEGSL
Sbjct: 16  CISGHDHGVERRPYHRNCGCALHSNNKSCRHGMPRCNNVSYPMRRAWSEGSL 67


>ref|XP_004139270.1| PREDICTED: uncharacterized protein LOC101211332 [Cucumis sativus]
           gi|449493669|ref|XP_004159403.1| PREDICTED:
           uncharacterized protein LOC101227888 [Cucumis sativus]
          Length = 108

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/51 (56%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
 Frame = +3

Query: 54  DAEITRRSYHRNCNCALHKMRGK---CSHVSSVANVSFPFRRAWSEGSLTL 197
           D+EI RR YHRNC CALHK   +   CSH S   ++S+P RR+WSEG L+L
Sbjct: 18  DSEIHRRPYHRNCGCALHKSSRQPPHCSH-SKSKSISYPIRRSWSEGCLSL 67


Top