BLASTX nr result

ID: Atractylodes22_contig00053359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053359
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communi...   105   3e-21
ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera...   102   3e-20
ref|XP_002299732.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycin...    96   4e-18
emb|CAN71893.1| hypothetical protein VITISV_043764 [Vitis vinifera]    96   4e-18

>ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communis]
           gi|223544890|gb|EEF46405.1| Nucleoporin NUP53, putative
           [Ricinus communis]
          Length = 332

 Score =  105 bits (263), Expect = 3e-21
 Identities = 51/76 (67%), Positives = 63/76 (82%)
 Frame = +2

Query: 2   LYQSRADAEKALNKNGMQINGALIIGVKPVDAMQRQALSNRPDSQGFIPLPPPPSAKSSE 181
           LYQSR+DA+KAL+KNGMQING LI+GVKPVD MQRQAL+ R ++QGF+ LPPP S++SSE
Sbjct: 228 LYQSRSDAQKALSKNGMQINGVLIVGVKPVDPMQRQALNERLNNQGFMTLPPPSSSRSSE 287

Query: 182 LMAFEPSACPYLLQNG 229
           L     S+ PY +QNG
Sbjct: 288 LKTLGASSRPYHIQNG 303


>ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera]
           gi|297743215|emb|CBI36082.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/82 (60%), Positives = 62/82 (75%)
 Frame = +2

Query: 2   LYQSRADAEKALNKNGMQINGALIIGVKPVDAMQRQALSNRPDSQGFIPLPPPPSAKSSE 181
           LYQ+R+DA+KAL+KNGMQING LI+GVKP+D MQRQAL+ R ++QGF+ LPPP S++S E
Sbjct: 214 LYQNRSDAQKALSKNGMQINGVLIVGVKPLDPMQRQALNERLNNQGFMTLPPPASSRSLE 273

Query: 182 LMAFEPSACPYLLQNGCRTRNS 247
                 S  PY LQNG   R S
Sbjct: 274 SNPLRVSPRPYYLQNGSNARQS 295


>ref|XP_002299732.1| predicted protein [Populus trichocarpa] gi|222846990|gb|EEE84537.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 49/76 (64%), Positives = 59/76 (77%)
 Frame = +2

Query: 2   LYQSRADAEKALNKNGMQINGALIIGVKPVDAMQRQALSNRPDSQGFIPLPPPPSAKSSE 181
           LYQSRADA+KAL+KNGMQING LIIGVK VD MQRQAL+ R ++QGF+ LPPP S ++ +
Sbjct: 225 LYQSRADAQKALSKNGMQINGVLIIGVKLVDPMQRQALNERINNQGFMTLPPPSSTRTPD 284

Query: 182 LMAFEPSACPYLLQNG 229
             A   S  P+ LQNG
Sbjct: 285 SNALRASPRPHYLQNG 300


>ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycine max]
           gi|255639315|gb|ACU19955.1| unknown [Glycine max]
          Length = 331

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/79 (62%), Positives = 62/79 (78%)
 Frame = +2

Query: 2   LYQSRADAEKALNKNGMQINGALIIGVKPVDAMQRQALSNRPDSQGFIPLPPPPSAKSSE 181
           LYQ+R+DA KALNKNGMQING LI+GVK +D MQRQAL+ R  +QGF+PL P PSA++SE
Sbjct: 228 LYQNRSDAHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPL-PLPSARNSE 286

Query: 182 LMAFEPSACPYLLQNGCRT 238
           + + +  + PY LQNG  T
Sbjct: 287 VSSLKAPSRPYYLQNGNST 305


>emb|CAN71893.1| hypothetical protein VITISV_043764 [Vitis vinifera]
          Length = 410

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 47/79 (59%), Positives = 59/79 (74%)
 Frame = +2

Query: 11  SRADAEKALNKNGMQINGALIIGVKPVDAMQRQALSNRPDSQGFIPLPPPPSAKSSELMA 190
           +R+DA+KAL+KNGMQING LI+GVKP+D MQRQAL+ R ++QGF+ LPPP S++S E   
Sbjct: 310 NRSDAQKALSKNGMQINGVLIVGVKPLDPMQRQALNERLNNQGFMTLPPPASSRSLESNP 369

Query: 191 FEPSACPYLLQNGCRTRNS 247
              S  PY LQNG   R S
Sbjct: 370 SRVSPRPYYLQNGSNARQS 388


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