BLASTX nr result

ID: Atractylodes22_contig00053355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053355
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002449547.1| hypothetical protein SORBIDRAFT_05g018930 [S...   120   1e-25
ref|XP_002443133.1| hypothetical protein SORBIDRAFT_08g010840 [S...   119   3e-25
gb|AEJ07956.1| putative polyprotein [Sorghum propinquum]              116   2e-24
gb|ACA61613.1| hypothetical protein AP2_E11.1 [Arabidopsis lyrat...   115   3e-24
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc...   115   4e-24

>ref|XP_002449547.1| hypothetical protein SORBIDRAFT_05g018930 [Sorghum bicolor]
           gi|241935390|gb|EES08535.1| hypothetical protein
           SORBIDRAFT_05g018930 [Sorghum bicolor]
          Length = 619

 Score =  120 bits (301), Expect = 1e-25
 Identities = 59/94 (62%), Positives = 72/94 (76%)
 Frame = +2

Query: 2   GFWSSVCDNSLFIYTQDTQMAYLLLYVDDIVITASSDDLLQNIIRMLSREFVMTDLGKLH 181
           GF +S  D+SLF+YT+    AYLLLYVDDIV+TASSD LL+ II  L  EF MTDLG+LH
Sbjct: 274 GFVASATDSSLFVYTEGGASAYLLLYVDDIVLTASSDALLRRIIDRLHSEFAMTDLGELH 333

Query: 182 HFLGIKVTHNSNGLFLDQSQYAKDIISRASMSSC 283
           HFLGI VT +S+GLFL Q QYA D++ +A M+ C
Sbjct: 334 HFLGISVTRSSDGLFLSQRQYAVDLLQKAGMAEC 367


>ref|XP_002443133.1| hypothetical protein SORBIDRAFT_08g010840 [Sorghum bicolor]
           gi|241943826|gb|EES16971.1| hypothetical protein
           SORBIDRAFT_08g010840 [Sorghum bicolor]
          Length = 725

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/94 (62%), Positives = 71/94 (75%)
 Frame = +2

Query: 2   GFWSSVCDNSLFIYTQDTQMAYLLLYVDDIVITASSDDLLQNIIRMLSREFVMTDLGKLH 181
           GF +S  D SLF+YT+    AYLLLYVDDIV+TASSD LL+ II  L  EF MTDLG+LH
Sbjct: 475 GFVASATDTSLFVYTEGGASAYLLLYVDDIVLTASSDALLRCIIDRLHSEFAMTDLGELH 534

Query: 182 HFLGIKVTHNSNGLFLDQSQYAKDIISRASMSSC 283
           HFLGI VT +S+GLFL Q QYA D++ +A M+ C
Sbjct: 535 HFLGISVTRSSDGLFLSQRQYAVDLLQKAGMAEC 568


>gb|AEJ07956.1| putative polyprotein [Sorghum propinquum]
          Length = 534

 Score =  116 bits (290), Expect = 2e-24
 Identities = 56/95 (58%), Positives = 70/95 (73%)
 Frame = +2

Query: 2   GFWSSVCDNSLFIYTQDTQMAYLLLYVDDIVITASSDDLLQNIIRMLSREFVMTDLGKLH 181
           GF  +  D+SLFIY + +  AYLLLYVDDIV+TASS   L+ +I  L REF MTD+G+LH
Sbjct: 195 GFVETKSDSSLFIYRRGSDTAYLLLYVDDIVLTASSAQFLRQVIVALQREFAMTDMGQLH 254

Query: 182 HFLGIKVTHNSNGLFLDQSQYAKDIISRASMSSCK 286
           HFLGI VT ++ G+FL Q QY  DI+ RA MS+CK
Sbjct: 255 HFLGISVTRSAKGMFLSQRQYTLDILERAGMSACK 289


>gb|ACA61613.1| hypothetical protein AP2_E11.1 [Arabidopsis lyrata subsp. petraea]
          Length = 471

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/95 (61%), Positives = 69/95 (72%)
 Frame = +2

Query: 2   GFWSSVCDNSLFIYTQDTQMAYLLLYVDDIVITASSDDLLQNIIRMLSREFVMTDLGKLH 181
           GF  S  D+SLFI+ +  + AYLLLYVDDI++TASS  LLQ II  L  EF MTD+GKLH
Sbjct: 125 GFVQSKADSSLFIFKRGCECAYLLLYVDDILLTASSTLLLQKIISKLKTEFPMTDMGKLH 184

Query: 182 HFLGIKVTHNSNGLFLDQSQYAKDIISRASMSSCK 286
           HFLG+K   N+ GLFL QS YA++II RA M  CK
Sbjct: 185 HFLGVKADFNTKGLFLSQSVYAQEIIQRAGMEDCK 219


>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 978

 Score =  115 bits (288), Expect = 4e-24
 Identities = 58/94 (61%), Positives = 67/94 (71%)
 Frame = +2

Query: 2   GFWSSVCDNSLFIYTQDTQMAYLLLYVDDIVITASSDDLLQNIIRMLSREFVMTDLGKLH 181
           GF SS  D SLF+Y     +AYLLLYVDDI++TASS  LLQ+I   L  EF MTDLG LH
Sbjct: 678 GFTSSASDTSLFVYKDGDNIAYLLLYVDDIILTASSATLLQHITARLHSEFAMTDLGDLH 737

Query: 182 HFLGIKVTHNSNGLFLDQSQYAKDIISRASMSSC 283
            FLGI VT +S+GLFL Q QYA D++ RA MS C
Sbjct: 738 FFLGISVTRSSDGLFLSQRQYAVDLLKRAGMSEC 771


Top