BLASTX nr result

ID: Atractylodes22_contig00053229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053229
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]     38   6e-06

>gb|ABD63156.1| Retrotransposon gag protein [Asparagus officinalis]
          Length = 275

 Score = 37.7 bits (86), Expect(2) = 6e-06
 Identities = 17/42 (40%), Positives = 29/42 (69%)
 Frame = -1

Query: 127 LLKSF*KKYVPPTRNAKCRDAISHFRQYDDETVPDACERFKE 2
           L ++F  KY PP++ A+ R+ I+ F Q + E++ DA ER+K+
Sbjct: 40  LSEAFLAKYFPPSKTAQLRNQITTFTQKEGESLYDAWERYKD 81



 Score = 37.0 bits (84), Expect(2) = 6e-06
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = -3

Query: 185 KVKVWLNSLERGSVTSWDVLAEKFLKK 105
           K + WL SL  GS+T+WD L+E FL K
Sbjct: 21  KARAWLQSLPPGSITTWDQLSEAFLAK 47