BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00053097
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD20658.1| putative retroelement pol polyprotein [Arabidopsi...   102   3e-20
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]     100   9e-20
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]        100   2e-19
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    99   5e-19
gb|ABA94261.1| retrotransposon protein, putative, unclassified [...    94   2e-18

>gb|AAD20658.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1611

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/117 (44%), Positives = 69/117 (58%), Gaps = 4/117 (3%)
 Frame = -1

Query: 350  LTNAPSTFQRLMNXXXXXXXXXXXXXXXXDILIYSKTWDAXXXXXXXXXXXLMDHHLVAK 171
            LTNAP+ F ++MN                DIL+YSK+W+A           L +H L AK
Sbjct: 785  LTNAPAAFMKMMNGVFRDFLDEFVIIFINDILVYSKSWEAHQEHLRAVLERLREHELFAK 844

Query: 170  LSKCTFGQTQVAYLGHIISSHGVAVDPDKIHTIQNWPVPKNVKDVRSFFG----YRR 12
            LSKC+F Q  V +LGH+IS  GV+VDP+KI +I+ WP P+N  ++RSF G    YRR
Sbjct: 845  LSKCSFWQRSVGFLGHVISDQGVSVDPEKIRSIKEWPRPRNATEIRSFLGLAGYYRR 901


>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1475

 Score =  100 bits (250), Expect = 9e-20
 Identities = 57/119 (47%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
 Frame = -1

Query: 350  LTNAPSTFQRLMNXXXXXXXXXXXXXXXXDILIYSKTWDAXXXXXXXXXXXLMDHHLVAK 171
            LTN P+TFQ LMN                DILIYSKT              L D+HLV K
Sbjct: 698  LTNDPATFQSLMNHVLAPFLRRFVLVFFDDILIYSKTRAEHLEHVKLVMQALQDNHLVIK 757

Query: 170  LSKCTFGQTQVAYLGHIISSHGVAVDPDKIHTIQNWPVPKNVKDVRSFFG----YRRVL 6
            L KC FG   V+YLGH+IS  GVA DP K+  I+NWP PK+V DVR F G    YRR +
Sbjct: 758  LKKCAFGLASVSYLGHVISQDGVATDPKKVGKIKNWPTPKDVTDVRKFLGMTGYYRRFI 816


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 53/110 (48%), Positives = 64/110 (58%)
 Frame = -1

Query: 350 LTNAPSTFQRLMNXXXXXXXXXXXXXXXXDILIYSKTWDAXXXXXXXXXXXLMDHHLVAK 171
           LTNAP+TFQ LMN                DILIYS +              L  HHL AK
Sbjct: 538 LTNAPATFQALMNSILAPYLRKFVLVFFDDILIYSPSLSDHVTHVELVLQLLRQHHLSAK 597

Query: 170 LSKCTFGQTQVAYLGHIISSHGVAVDPDKIHTIQNWPVPKNVKDVRSFFG 21
            SKC FGQ+QV YLG+IIS+ GVA+DP K+  ++NWPVPK+V D+  F G
Sbjct: 598 PSKCVFGQSQVEYLGYIISNAGVAIDPTKVQAVKNWPVPKSVTDLSGFLG 647


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
           finger, CCHC-type; Peptidase aspartic, active site;
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 1297

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/110 (46%), Positives = 59/110 (53%)
 Frame = -1

Query: 350 LTNAPSTFQRLMNXXXXXXXXXXXXXXXXDILIYSKTWDAXXXXXXXXXXXLMDHHLVAK 171
           L NAPSTFQ LMN                DIL+YS+ W             +  H LVA 
Sbjct: 508 LMNAPSTFQSLMNDVFRLLLRKFVLVFFDDILVYSQDWKTHMEHVEEVLRIMQTHGLVAN 567

Query: 170 LSKCTFGQTQVAYLGHIISSHGVAVDPDKIHTIQNWPVPKNVKDVRSFFG 21
             KC FGQ  V YLGH+IS  GVAVDP K+ ++  WP+PKNVK VR F G
Sbjct: 568 KKKCYFGQETVEYLGHLISKEGVAVDPSKVVSVTRWPIPKNVKGVRGFLG 617


>gb|ABA94261.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1369

 Score = 94.0 bits (232), Expect(2) = 2e-18
 Identities = 50/110 (45%), Positives = 65/110 (59%)
 Frame = -1

Query: 350 LTNAPSTFQRLMNXXXXXXXXXXXXXXXXDILIYSKTWDAXXXXXXXXXXXLMDHHLVAK 171
           LT+AP+TFQ +MN                DILIYS+T +            L  H L  K
Sbjct: 665 LTSAPATFQSVMNNILSSLLRKCVLVFVDDILIYSRTLEEHLVHLQTVFQILHKHQLKVK 724

Query: 170 LSKCTFGQTQVAYLGHIISSHGVAVDPDKIHTIQNWPVPKNVKDVRSFFG 21
            SKC+F Q ++AYLGHIIS +GV+ D DKI  +Q+WPVP +VK++RSF G
Sbjct: 725 KSKCSFAQQKLAYLGHIISPNGVSTDSDKIAVVQSWPVPSSVKELRSFLG 774



 Score = 23.5 bits (49), Expect(2) = 2e-18
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 43  KTFEVFLGIAGYYR 2
           K    FLG+AGYYR
Sbjct: 767 KELRSFLGLAGYYR 780