BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051787
         (386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza...    73   1e-21
gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sat...    73   1e-21
gb|ABB47941.2| retrotransposon protein, putative, unclassified [...    73   1e-21
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...    76   2e-20
gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]               65   2e-19

>gb|AAM08751.1|AC025098_18 Putative copia-type polyprotein [Oryza sativa Japonica Group]
          Length = 1803

 Score = 73.2 bits (178), Expect(2) = 1e-21
 Identities = 26/51 (50%), Positives = 40/51 (78%)
 Frame = -2

Query: 154 LHLPFNPSMSPTFAPFDIIYSDLWTSPVLSTNGYRYYLVLLDDFTHFVWVY 2
           + LPF+ S S T  PF ++++D+WTSP+ S +GY+YY+V LDDFTH++W +
Sbjct: 540 VRLPFHSSSSQTLFPFQLVHTDVWTSPIYSNSGYKYYVVFLDDFTHYIWTF 590



 Score = 55.1 bits (131), Expect(2) = 1e-21
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = -1

Query: 386 RTGAMVMRCDSSGNLYPVS-PFPRSQSCSLVSLATISSQIWHQRLGHPGDHVFSFLRNNK 210
           +T  + +RCDS G+LYP+  P P + S +    ++ S + WH RLGHPG    S +  + 
Sbjct: 464 QTQVVKLRCDSPGDLYPLRLPSPHALSAT----SSPSVEHWHLRLGHPGSASLSKVLGSF 519

Query: 209 LISCNKEHRSPSLCSSCHIAS 147
              CNK   +P  CS+CH+ +
Sbjct: 520 DFQCNKS--APHHCSACHVGT 538


>gb|AAG13591.2|AC051633_7 putative gag/pol polyprotein [Oryza sativa Japonica Group]
          Length = 1417

 Score = 73.2 bits (178), Expect(2) = 1e-21
 Identities = 26/51 (50%), Positives = 40/51 (78%)
 Frame = -2

Query: 154 LHLPFNPSMSPTFAPFDIIYSDLWTSPVLSTNGYRYYLVLLDDFTHFVWVY 2
           + LPF+ S S T  PF ++++D+WTSP+ S +GY+YY+V LDDFTH++W +
Sbjct: 540 VRLPFHSSSSQTLFPFQLVHTDVWTSPIYSNSGYKYYVVFLDDFTHYIWTF 590



 Score = 55.1 bits (131), Expect(2) = 1e-21
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = -1

Query: 386 RTGAMVMRCDSSGNLYPVS-PFPRSQSCSLVSLATISSQIWHQRLGHPGDHVFSFLRNNK 210
           +T  + +RCDS G+LYP+  P P + S +    ++ S + WH RLGHPG    S +  + 
Sbjct: 464 QTQVVKLRCDSPGDLYPLRLPSPHALSAT----SSPSVEHWHLRLGHPGSASLSKVLGSF 519

Query: 209 LISCNKEHRSPSLCSSCHIAS 147
              CNK   +P  CS+CH+ +
Sbjct: 520 DFQCNKS--APHHCSACHVGT 538


>gb|ABB47941.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1414

 Score = 73.2 bits (178), Expect(2) = 1e-21
 Identities = 26/51 (50%), Positives = 40/51 (78%)
 Frame = -2

Query: 154 LHLPFNPSMSPTFAPFDIIYSDLWTSPVLSTNGYRYYLVLLDDFTHFVWVY 2
           + LPF+ S S T  PF ++++D+WTSP+ S +GY+YY+V LDDFTH++W +
Sbjct: 540 VRLPFHSSSSQTLFPFQLVHTDVWTSPIYSNSGYKYYVVFLDDFTHYIWTF 590



 Score = 55.1 bits (131), Expect(2) = 1e-21
 Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
 Frame = -1

Query: 386 RTGAMVMRCDSSGNLYPVS-PFPRSQSCSLVSLATISSQIWHQRLGHPGDHVFSFLRNNK 210
           +T  + +RCDS G+LYP+  P P + S +    ++ S + WH RLGHPG    S +  + 
Sbjct: 464 QTQVVKLRCDSPGDLYPLRLPSPHALSAT----SSPSVEHWHLRLGHPGSASLSKVLGSF 519

Query: 209 LISCNKEHRSPSLCSSCHIAS 147
              CNK   +P  CS+CH+ +
Sbjct: 520 DFQCNKS--APHHCSACHVGT 538


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score = 75.9 bits (185), Expect(2) = 2e-20
 Identities = 31/57 (54%), Positives = 44/57 (77%)
 Frame = -2

Query: 172 CVLLVILHLPFNPSMSPTFAPFDIIYSDLWTSPVLSTNGYRYYLVLLDDFTHFVWVY 2
           C L     LPF+ S S T +PF++++ D+WTSPVLST+G++YYLV+LDDF+HF W +
Sbjct: 525 CKLGKHTRLPFSRSQSSTSSPFELVHCDVWTSPVLSTSGFKYYLVVLDDFSHFCWTF 581



 Score = 47.8 bits (112), Expect(2) = 2e-20
 Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = -1

Query: 386 RTGAMVMRCDSSGNLY--PVSPFPRSQSCSLVSLATISSQIWHQRLGHPGDHVFSFLRNN 213
           RT  +++RC+S G+LY  P++    + + +  S    SS +WH+RLGHP       L   
Sbjct: 454 RTRRVILRCNSRGDLYTLPIA----APAIAAHSFLAQSSTLWHRRLGHPSSAAIQTLHKL 509

Query: 212 KLISCNK-EHRSPSLCSSCHI 153
            ++ C K +H   SLC +C +
Sbjct: 510 AILPCTKIDH---SLCHACKL 527


>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
          Length = 826

 Score = 64.7 bits (156), Expect(2) = 2e-19
 Identities = 24/49 (48%), Positives = 37/49 (75%)
 Frame = -2

Query: 148 LPFNPSMSPTFAPFDIIYSDLWTSPVLSTNGYRYYLVLLDDFTHFVWVY 2
           LPF+ S S     FD+I+ DLW SP++S +GY+YYL++LDD +H++W +
Sbjct: 638 LPFSTSTSRATNNFDLIHCDLWASPIVSVSGYKYYLIILDDRSHYIWTF 686



 Score = 55.8 bits (133), Expect(2) = 2e-19
 Identities = 29/78 (37%), Positives = 44/78 (56%)
 Frame = -1

Query: 386 RTGAMVMRCDSSGNLYPVSPFPRSQSCSLVSLATISSQIWHQRLGHPGDHVFSFLRNNKL 207
           +T  ++ RC+SSG+LYP  P     + S  +L    + +WH+RLGH G    S L ++  
Sbjct: 560 QTRNVIARCNSSGDLYPFFP----PATSATALLAAPASLWHRRLGHLGREALSQLVSSSA 615

Query: 206 ISCNKEHRSPSLCSSCHI 153
           ISCNK+     LC +C +
Sbjct: 616 ISCNKDD-DYHLCHACQL 632