BLASTX nr result

ID: Atractylodes22_contig00051576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051576
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322250.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19
ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]    97   1e-18
ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containi...    92   4e-17
ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16

>ref|XP_002322250.1| predicted protein [Populus trichocarpa] gi|222869246|gb|EEF06377.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/77 (59%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1   PACTWIDVKKQQHMFLSGD-KSKSHVQILRYLKKLMLEIAKYGYVPKKNSLLPDVDEQEE 177
           P C+WI+VK++ H+FLSGD +     +I + + KLMLEI+KYGYVP + +LLPDVDEQEE
Sbjct: 415 PVCSWIEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEE 474

Query: 178 QMSLYHSEKFAVSFGLI 228
           ++ LYHSEK A++FGLI
Sbjct: 475 RVRLYHSEKLAIAFGLI 491


>ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/77 (59%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1   PACTWIDVKKQQHMFLSGDKSKSHV-QILRYLKKLMLEIAKYGYVPKKNSLLPDVDEQEE 177
           PAC+WI++KKQ + F+SGDK  +   +I + L +LMLEI+K+GYVP+   LLPDVDEQEE
Sbjct: 571 PACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQEE 630

Query: 178 QMSLYHSEKFAVSFGLI 228
           ++ LYHSEK A++FGLI
Sbjct: 631 RVLLYHSEKLAIAFGLI 647


>emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 46/77 (59%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1   PACTWIDVKKQQHMFLSGDKSKSHV-QILRYLKKLMLEIAKYGYVPKKNSLLPDVDEQEE 177
           PAC+WI++KKQ + F+SGDK  +   +I + L +LMLEI+K+GYVP+   LLPDVDEQEE
Sbjct: 571 PACSWIEIKKQPYGFISGDKCHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQEE 630

Query: 178 QMSLYHSEKFAVSFGLI 228
           ++ LYHSEK A++FGLI
Sbjct: 631 RVLLYHSEKLAIAFGLI 647


>ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 690

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/77 (54%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1   PACTWIDVKKQQHMFLSGDKSKSHV-QILRYLKKLMLEIAKYGYVPKKNSLLPDVDEQEE 177
           PACTWI+VKKQ + FL GDKS S   +I   +  +M+EI+++GYV +  +LLPDVDE+E+
Sbjct: 557 PACTWIEVKKQSYAFLCGDKSHSQTKEIYEKVNNMMVEISRHGYVEENKALLPDVDEEEQ 616

Query: 178 QMSLYHSEKFAVSFGLI 228
           ++  YHSEK A++FGLI
Sbjct: 617 RILKYHSEKLAIAFGLI 633


>ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 691

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 41/77 (53%), Positives = 58/77 (75%), Gaps = 1/77 (1%)
 Frame = +1

Query: 1   PACTWIDVKKQQHMFLSGDKSKSHV-QILRYLKKLMLEIAKYGYVPKKNSLLPDVDEQEE 177
           PAC+W++VKKQ + FL GDKS S   +I + +  LM+EI K+GY  +  +LLPDVDE+E+
Sbjct: 558 PACSWVEVKKQPYAFLCGDKSHSQTKEIYQKVDNLMVEICKHGYAEENETLLPDVDEEEQ 617

Query: 178 QMSLYHSEKFAVSFGLI 228
           ++  YHSEK A++FGLI
Sbjct: 618 RILKYHSEKLAIAFGLI 634


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