BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050986
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]      114   1e-23
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]    107   1e-23
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   109   4e-23
gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsi...   110   9e-23
emb|CAD40196.2| OSJNBb0043H09.2 [Oryza sativa Japonica Group]         109   2e-22

>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score =  114 bits (284), Expect = 1e-23
 Identities = 59/104 (56%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
 Frame = +3

Query: 6    VDSLLKAREVTVKLLKDNLTKAQHRMKSQAD*HISERVFAVGDWVYLKLQPYHQHSVNRR 185
            +++ LK RE+  K++K +L +AQ RMK QAD   SERVF+VGDWVYLKLQPY Q SV  R
Sbjct: 1365 LETWLKERELMTKVIKLHLHRAQDRMKRQADKQRSERVFSVGDWVYLKLQPYIQSSVATR 1424

Query: 186  VFHKLSAKYFGPFKVLERI-*VAYKLELPSVSKIHNVFHVSRFQ 314
              HKLS K+FGPF++ +R+  VAY+L LP+ S IH +FHVS+ +
Sbjct: 1425 SNHKLSFKFFGPFQITDRLGSVAYRLALPASSSIHPIFHVSQLK 1468


>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
          Length = 933

 Score =  107 bits (267), Expect(2) = 1e-23
 Identities = 55/104 (52%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
 Frame = +3

Query: 6    VDSLLKAREVTVKLLKDNLTKAQHRMKSQAD*HISERVFAVGDWVYLKLQPYHQHSVNRR 185
            +DS L  R +  +LL+ +L +AQ  MK+QAD   S R F VGDWV+LKLQPY Q SV +R
Sbjct: 702  LDSWLSERHLMTQLLRQHLNRAQQVMKTQADKKRSFRSFQVGDWVFLKLQPYVQSSVAKR 761

Query: 186  VFHKLSAKYFGPFKVLERI-*VAYKLELPSVSKIHNVFHVSRFQ 314
              HKLS +YFGP+++L ++  VAYKL+LP+ S +H VFHVS+ +
Sbjct: 762  ANHKLSFRYFGPYQILSKVGSVAYKLQLPADSMVHPVFHVSQLK 805



 Score = 26.9 bits (58), Expect(2) = 1e-23
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +2

Query: 305 TVSSELPPVRDNG*FLPVPVRIYDRRMNNRRNKVI 409
           ++ S+LP + D+   +  PV+I D R+  + NKV+
Sbjct: 813 SIQSQLPNITDH---IQYPVQILDTRIQKKGNKVV 844


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  109 bits (272), Expect(2) = 4e-23
 Identities = 57/101 (56%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
 Frame = +3

Query: 18   LKAREVTVKLLKDNLTKAQHRMKSQAD*HISERVFAVGDWVYLKLQPYHQHSVNRRVFHK 197
            L+ RE  +  LK +L +AQHRMK  AD H +ER F +GD+VY+KLQPY Q SV  R   K
Sbjct: 1328 LQEREDMLLFLKFHLMRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQSVVMRANQK 1387

Query: 198  LSAKYFGPFKVLERI-*VAYKLELPSVSKIHNVFHVSRFQV 317
            LS KYFGP+K+++R   VAYKL LPS S++H VFHVS+ +V
Sbjct: 1388 LSPKYFGPYKIIDRCGEVAYKLALPSYSQVHPVFHVSQLKV 1428



 Score = 23.5 bits (49), Expect(2) = 4e-23
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 302  VTVSSELPPVRDNG*FLPVPVRIYDRRMNNRRNKVI 409
            V+ +  LP V  +  F  VP ++ +R+M NR+ K +
Sbjct: 1433 VSTTVHLPSVMQDV-FEKVPEKVVERKMVNRQGKAV 1467


>gb|AAD24647.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 780

 Score =  110 bits (276), Expect = 9e-23
 Identities = 57/101 (56%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
 Frame = +3

Query: 18  LKAREVTVKLLKDNLTKAQHRMKSQAD*HISERVFAVGDWVYLKLQPYHQHSVNRRVFHK 197
           ++ RE  +  LK +L +AQHRMK  AD HI+ER F VGD+V++KLQPY Q SV  R   K
Sbjct: 656 MQERESMILFLKFHLMRAQHRMKQLADQHITEREFEVGDYVFVKLQPYRQQSVVMRSTQK 715

Query: 198 LSAKYFGPFKVLERI-*VAYKLELPSVSKIHNVFHVSRFQV 317
           LS KYFGP+KV++R   VAYKL+LP+ S++H VFHVS+ +V
Sbjct: 716 LSPKYFGPYKVIDRCGEVAYKLQLPANSQVHPVFHVSQLRV 756


>emb|CAD40196.2| OSJNBb0043H09.2 [Oryza sativa Japonica Group]
          Length = 1409

 Score =  109 bits (273), Expect = 2e-22
 Identities = 57/102 (55%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
 Frame = +3

Query: 18   LKAREVTVKLLKDNLTKAQHRMKSQAD*HISERVFAVGDWVYLKLQPYHQHSVNRRVFHK 197
            L+ R+   +LL+ +L +AQ +MKSQAD   S + F VGDWVYLKLQPY Q SV +R  HK
Sbjct: 1173 LQERQFMQQLLQQHLNRAQQQMKSQADKKRSFKEFNVGDWVYLKLQPYIQTSVTKRANHK 1232

Query: 198  LSAKYFGPFKVLERI-*VAYKLELPSVSKIHNVFHVSRFQVS 320
            L  +YFGPF+VL+R+  VAY+L+LPS S IH VFHVS+ + +
Sbjct: 1233 LEFRYFGPFQVLDRVGAVAYRLQLPSYSAIHPVFHVSQLRAA 1274