BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050374
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   162   2e-38
gb|AAD17357.1| contains similarity to retrovirus-related polypro...   160   1e-37
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     155   2e-36
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...   154   9e-36
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   151   6e-35

>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
           19.29) [Arabidopsis thaliana] gi|7267136|emb|CAB80804.1|
           putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/101 (76%), Positives = 84/101 (83%)
 Frame = -1

Query: 305 IKTLRSDRGGEYLSQEFLEHLRSCGIVSQLTPPRTPQHNGVSERRNRTLLDMVRSMMSRA 126
           IK LRSDRGGEYLSQ F +HLR CGIVSQLTPP TPQ NGVSERRNRTLLDMVRSMMS  
Sbjct: 203 IKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQWNGVSERRNRTLLDMVRSMMSHT 262

Query: 125 SLPKSFWGYALGTAARILNNAPTKKVNKSPYELWTGKIPNL 3
            LP  FWGYAL T+A +LN  P+K V K+PYE+WTGK+PNL
Sbjct: 263 DLPSPFWGYALETSAFMLNRCPSKSVEKTPYEIWTGKVPNL 303


>gb|AAD17357.1| contains similarity to retrovirus-related polyproteins [Arabidopsis
           thaliana] gi|7267382|emb|CAB77943.1| putative transposon
           protein [Arabidopsis thaliana]
          Length = 769

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/101 (75%), Positives = 83/101 (82%)
 Frame = -1

Query: 305 IKTLRSDRGGEYLSQEFLEHLRSCGIVSQLTPPRTPQHNGVSERRNRTLLDMVRSMMSRA 126
           IK LRSDRGGEYLSQ F +HLR CGIVSQLTPP TPQ NGVSERRN+TLLDMVRSMMS  
Sbjct: 235 IKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQGNGVSERRNQTLLDMVRSMMSHT 294

Query: 125 SLPKSFWGYALGTAARILNNAPTKKVNKSPYELWTGKIPNL 3
            LP SFWGYAL T   +LN  P+K V K+PYE+WTGK+PNL
Sbjct: 295 DLPSSFWGYALETYVFMLNRCPSKSVEKTPYEIWTGKVPNL 335


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  155 bits (393), Expect = 2e-36
 Identities = 75/101 (74%), Positives = 84/101 (83%)
 Frame = -1

Query: 305 IKTLRSDRGGEYLSQEFLEHLRSCGIVSQLTPPRTPQHNGVSERRNRTLLDMVRSMMSRA 126
           IK LRSDRGGEY+SQEF  HL+ CGIV QLTPP TPQ NGVSERRNRTLLDMVRSMMS++
Sbjct: 559 IKFLRSDRGGEYVSQEFGNHLKDCGIVPQLTPPGTPQWNGVSERRNRTLLDMVRSMMSQS 618

Query: 125 SLPKSFWGYALGTAARILNNAPTKKVNKSPYELWTGKIPNL 3
            LP SFWGYAL TAA  LN  P+K V K+PYE+WTG+ P+L
Sbjct: 619 DLPLSFWGYALETAALTLNRVPSKSVEKTPYEIWTGQPPSL 659


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77550379|gb|ABA93176.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 938

 Score =  154 bits (388), Expect = 9e-36
 Identities = 75/101 (74%), Positives = 82/101 (81%)
 Frame = -1

Query: 305 IKTLRSDRGGEYLSQEFLEHLRSCGIVSQLTPPRTPQHNGVSERRNRTLLDMVRSMMSRA 126
           IK LRSDRGGEYLS EF  HL+ CGIV QLTPP TPQ NGVSERRNRTLLDMVRSMMS+ 
Sbjct: 444 IKYLRSDRGGEYLSLEFGNHLKECGIVPQLTPPGTPQWNGVSERRNRTLLDMVRSMMSQT 503

Query: 125 SLPKSFWGYALGTAARILNNAPTKKVNKSPYELWTGKIPNL 3
            LP SFWGY L TAA  LN  P+K V+K+PYE+WTGK P+L
Sbjct: 504 DLPLSFWGYTLETAAFTLNRVPSKSVDKTPYEIWTGKRPSL 544


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  151 bits (381), Expect = 6e-35
 Identities = 73/101 (72%), Positives = 83/101 (82%)
 Frame = -1

Query: 305 IKTLRSDRGGEYLSQEFLEHLRSCGIVSQLTPPRTPQHNGVSERRNRTLLDMVRSMMSRA 126
           IK+LRSDRGGE+LSQEF  HL+ CGIV QLTPP TPQ NGVSER NRTLLDMVR MMS++
Sbjct: 647 IKSLRSDRGGEFLSQEFGNHLKQCGIVPQLTPPSTPQWNGVSERCNRTLLDMVRLMMSQS 706

Query: 125 SLPKSFWGYALGTAARILNNAPTKKVNKSPYELWTGKIPNL 3
            LP  FWGYAL TAA  LN  P+K V+K+PYE+WTGK P+L
Sbjct: 707 DLPLYFWGYALETAAFTLNRVPSKSVDKTPYEIWTGKSPSL 747