BLASTX nr result

ID: Atractylodes22_contig00050277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050277
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...    82   2e-16
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    71   4e-15
ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209...    75   5e-15
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    75   7e-15
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...    84   1e-14

>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score = 81.6 bits (200), Expect(2) = 2e-16
 Identities = 35/62 (56%), Positives = 47/62 (75%)
 Frame = +2

Query: 116  GHSGVERTYQRVAAELFWLGMMGDTREYVKRCDVSQRNKHLGCSPAGLLQPIPLP*QVWE 295
            GHSG  RTY+R+AAEL+W GM  D + YV +C V Q+NK    SPAGLLQP+P+P ++WE
Sbjct: 877  GHSGQLRTYKRIAAELYWEGMKNDIKIYVDQCPVCQQNKTQALSPAGLLQPLPIPSRIWE 936

Query: 296  EL 301
            ++
Sbjct: 937  DI 938



 Score = 28.5 bits (62), Expect(2) = 2e-16
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 18  QQHLLWYNDHLVIRRDSSLLPMIMDEFH 101
           +Q  L+Y   LV+ + SSLLP I+  FH
Sbjct: 844 KQGRLFYKGRLVLPKTSSLLPTILHTFH 871


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 71.2 bits (173), Expect(2) = 4e-15
 Identities = 29/62 (46%), Positives = 43/62 (69%)
 Frame = +2

Query: 116  GHSGVERTYQRVAAELFWLGMMGDTREYVKRCDVSQRNKHLGCSPAGLLQPIPLP*QVWE 295
            GHSG+ +TY+R+A E +W GM  D   +V+ C + Q+ K    SPAGLLQP+P+P  +WE
Sbjct: 1117 GHSGIFKTYKRLAGEWYWKGMKKDVTTFVQNCQICQQFKTSTLSPAGLLQPLPIPLAIWE 1176

Query: 296  EL 301
            ++
Sbjct: 1177 DI 1178



 Score = 34.7 bits (78), Expect(2) = 4e-15
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = +3

Query: 3    KGFVSQQHLLWYNDHLVIRRDSSLLPMIMDEFHASPM 113
            +GF  +  LL YN  LVI ++  L   +++E+H+SPM
Sbjct: 1079 QGFTVEHGLLKYNGRLVIPKNVPLTTTLLEEYHSSPM 1115


>ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209704 [Cucumis sativus]
          Length = 1503

 Score = 75.1 bits (183), Expect(2) = 5e-15
 Identities = 32/61 (52%), Positives = 44/61 (72%)
 Frame = +2

Query: 116  GHSGVERTYQRVAAELFWLGMMGDTREYVKRCDVSQRNKHLGCSPAGLLQPIPLP*QVWE 295
            GHSG  RTY+R+  EL+W GM  D ++YV+ C+V QRNK     PAG+LQPIP+P ++ E
Sbjct: 1334 GHSGFLRTYKRMCGELYWKGMKADVKKYVQECEVCQRNKLEATKPAGVLQPIPIPERILE 1393

Query: 296  E 298
            +
Sbjct: 1394 D 1394



 Score = 30.4 bits (67), Expect(2) = 5e-15
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +3

Query: 30   LWYNDHLVIRRDSSLLPMIMDEFHAS 107
            LWY   +V+ ++S+L+P ++  FH S
Sbjct: 1305 LWYKKRIVLSKESTLIPTLLHTFHDS 1330


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 74.7 bits (182), Expect(2) = 7e-15
 Identities = 31/62 (50%), Positives = 44/62 (70%)
 Frame = +2

Query: 116  GHSGVERTYQRVAAELFWLGMMGDTREYVKRCDVSQRNKHLGCSPAGLLQPIPLP*QVWE 295
            GHSG+ +TYQR+A E FW GM  D   +++ C V Q+NK    +PAGLLQP+P+P  +WE
Sbjct: 953  GHSGIFKTYQRLATEWFWKGMKQDVITFIQECAVCQQNKTSSLAPAGLLQPLPIPTLIWE 1012

Query: 296  EL 301
            ++
Sbjct: 1013 DV 1014



 Score = 30.4 bits (67), Expect(2) = 7e-15
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +3

Query: 6    GFVSQQHLLWYNDHLVIRRDSSLLPMIMDEFHASPM 113
            GF  +Q +L +   LV+ R  ++   ++ E+HA+PM
Sbjct: 916  GFTEEQGVLKFKGRLVVPRKVAMTSRLIHEYHATPM 951


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 34/62 (54%), Positives = 47/62 (75%)
 Frame = +2

Query: 116  GHSGVERTYQRVAAELFWLGMMGDTREYVKRCDVSQRNKHLGCSPAGLLQPIPLP*QVWE 295
            GHSG  RTY+R+AA ++W+GM    +EYV+ CD  QR K+L  SP GLLQP+P+P ++WE
Sbjct: 876  GHSGFYRTYRRLAANVYWVGMKNTVQEYVRSCDTCQRQKYLASSPGGLLQPLPVPDRIWE 935

Query: 296  EL 301
            +L
Sbjct: 936  DL 937


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