BLASTX nr result

ID: Atractylodes22_contig00049757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049757
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331064.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_002325189.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06
emb|CBI25545.3| unnamed protein product [Vitis vinifera]               56   4e-06

>ref|XP_002331064.1| predicted protein [Populus trichocarpa] gi|222872994|gb|EEF10125.1|
           predicted protein [Populus trichocarpa]
          Length = 389

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
 Frame = +2

Query: 107 KDDTQQVLKILEALKQASHDLQKNPDSKKADGDRSFSCSPAIKAXXXXXXXXXXXXXXDP 286
           K++  +VLK+LEALKQASHDLQ +P    A+     S SPA+KA              DP
Sbjct: 8   KEEITRVLKVLEALKQASHDLQTHPGPNSAE-----SNSPALKALLELETESDTILSKDP 62

Query: 287 QLATLSTHLSALKTL---IHNSC 346
            L+TLS HL++LK+L   +  SC
Sbjct: 63  LLSTLSEHLASLKSLFDTLQRSC 85


>ref|XP_002325189.1| predicted protein [Populus trichocarpa] gi|222866623|gb|EEF03754.1|
           predicted protein [Populus trichocarpa]
          Length = 557

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 34/76 (44%), Positives = 44/76 (57%)
 Frame = +2

Query: 107 KDDTQQVLKILEALKQASHDLQKNPDSKKADGDRSFSCSPAIKAXXXXXXXXXXXXXXDP 286
           K++  +VLK+LEALKQASH+LQ  P +   +     S SPAIKA              DP
Sbjct: 7   KEEITRVLKVLEALKQASHELQTLPSTNLTE-----SNSPAIKALLELETESDTILSKDP 61

Query: 287 QLATLSTHLSALKTLI 334
            L+ LS HLS LK+L+
Sbjct: 62  YLSALSQHLSKLKSLV 77


>emb|CBI25545.3| unnamed protein product [Vitis vinifera]
          Length = 412

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 40/109 (36%), Positives = 52/109 (47%)
 Frame = +2

Query: 11  WTQPSRIYKLIRYLLSLQSAMEAVAEAFHFTLKDDTQQVLKILEALKQASHDLQKNPDSK 190
           WT  SR+Y         +++ME  ++           QVL +LEAL+QASH LQ NP   
Sbjct: 17  WTLGSRVYGAAGNRGRGKASMEEASD-------HPNPQVLTVLEALRQASHHLQTNPTLN 69

Query: 191 KADGDRSFSCSPAIKAXXXXXXXXXXXXXXDPQLATLSTHLSALKTLIH 337
             +     S S AIKA              DP L+ LS HLS+LK L+H
Sbjct: 70  SDN-----SNSSAIKALLELETESNSLLSSDPHLSALSRHLSSLKDLVH 113


Top