BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049673
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...   102   4e-20
gb|AEJ07956.1| putative polyprotein [Sorghum propinquum]               98   8e-19
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...    98   8e-19
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    96   2e-18
emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group]                 96   4e-18

>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score =  102 bits (253), Expect = 4e-20
 Identities = 44/79 (55%), Positives = 57/79 (72%)
 Frame = -3

Query: 244  HPMVTRSQHDIFKPIQRVNLHTSTISPMPRSYLQALQDPHWQQAMQDEYNALIKNGTWVL 65
            H M TR +  + KP+QR+NLH ST+SP+PR+Y  AL DP+W+ AM++E+ AL  N TW L
Sbjct: 1055 HTMTTRGKAGVRKPVQRLNLHASTLSPVPRTYRAALADPYWRTAMEEEFTALTANRTWDL 1114

Query: 64   VPRPHGVNVVRSMWLFKKK 8
            VPRP G NVV   W+FK K
Sbjct: 1115 VPRPSGANVVTGKWIFKHK 1133


>gb|AEJ07956.1| putative polyprotein [Sorghum propinquum]
          Length = 534

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 44/79 (55%), Positives = 56/79 (70%)
 Frame = -3

Query: 238 MVTRSQHDIFKPIQRVNLHTSTISPMPRSYLQALQDPHWQQAMQDEYNALIKNGTWVLVP 59
           M TR +  I +P+ R+NLH   +SP+PRS   AL DP+W+ AMQ E++ALI N TW LVP
Sbjct: 1   MRTRGKSGIAQPVDRLNLHVVPVSPLPRSVRDALSDPNWRSAMQAEFDALIGNDTWSLVP 60

Query: 58  RPHGVNVVRSMWLFKKKLH 2
           RP GVNVV   W+F+ KLH
Sbjct: 61  RPPGVNVVTGKWIFRHKLH 79


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1679

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 43/81 (53%), Positives = 57/81 (70%)
 Frame = -3

Query: 244  HPMVTRSQHDIFKPIQRVNLHTSTISPMPRSYLQALQDPHWQQAMQDEYNALIKNGTWVL 65
            H M TR++    KP+ R+NLH + +S +P++Y  AL DP W+ AM++EYNAL+ N TW L
Sbjct: 1147 HVMTTRAKSGHHKPVHRLNLHAAPLSLVPKTYRAALADPLWRAAMEEEYNALLANRTWDL 1206

Query: 64   VPRPHGVNVVRSMWLFKKKLH 2
            VPRP GVNVV   W+FK K H
Sbjct: 1207 VPRPAGVNVVTGKWIFKHKFH 1227


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 46/82 (56%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
 Frame = -3

Query: 244  HPMVTRSQHDIFKPIQRVNLHTST-ISPMPRSYLQALQDPHWQQAMQDEYNALIKNGTWV 68
            HPMVTR++  I KP  R+ LHT   ISP+P S++QA +DP W  +M  E++A IK+ TWV
Sbjct: 782  HPMVTRAKSGIVKPCIRLCLHTDLKISPLPLSHIQAAKDPFWNNSMNVEHDAPIKSRTWV 841

Query: 67   LVPRPHGVNVVRSMWLFKKKLH 2
            LVPRP   N+VRSMWLFK K +
Sbjct: 842  LVPRPKNTNIVRSMWLFKHKFN 863


>emb|CAH67061.1| H0112G12.6 [Oryza sativa Indica Group]
          Length = 811

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 42/81 (51%), Positives = 56/81 (69%)
 Frame = -3

Query: 244 HPMVTRSQHDIFKPIQRVNLHTSTISPMPRSYLQALQDPHWQQAMQDEYNALIKNGTWVL 65
           H M TR++    KP+ R+NLH + +S +P++Y  AL DP W+ AM++EYNAL+ N TW L
Sbjct: 279 HVMTTRAKSGHHKPVHRLNLHAAPLSLVPKTYRAALADPLWRAAMEEEYNALLANRTWDL 338

Query: 64  VPRPHGVNVVRSMWLFKKKLH 2
           VPRP  VNVV   W+FK K H
Sbjct: 339 VPRPASVNVVAGKWIFKHKFH 359