BLASTX nr result

ID: Atractylodes22_contig00048978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048978
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Sh...    74   2e-11
ref|XP_002981966.1| hypothetical protein SELMODRAFT_421332 [Sela...    66   3e-09
ref|XP_002981967.1| hypothetical protein SELMODRAFT_115352 [Sela...    65   7e-09
pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimi...    63   3e-08
gb|ADJ53037.1| antimicrobial peptide 1 [Pinus pinaster]                63   3e-08

>sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Short=AMP1; AltName:
           Full=MiAMP1; Flags: Precursor gi|2181943|emb|CAA71842.1|
           AMP1 [Macadamia integrifolia]
          Length = 102

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 32/80 (40%), Positives = 47/80 (58%)
 Frame = -3

Query: 241 VLMAVVSELANASSITMYRLGGCGGETRTYSRCGCSNLLYMGGYQFRYTGQSARMYNTGN 62
           +L+A+ SE+ N S+ T++   GC      YS+CGCS +   GGY F YTGQ+A +YN   
Sbjct: 15  MLIAMASEMVNGSAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAG 74

Query: 61  CLGGSVFTFNGNSRQCSGVG 2
           C G +   F  ++R C+  G
Sbjct: 75  CSGVAHTRFGSSARACNPFG 94


>ref|XP_002981966.1| hypothetical protein SELMODRAFT_421332 [Selaginella moellendorffii]
           gi|300150408|gb|EFJ17059.1| hypothetical protein
           SELMODRAFT_421332 [Selaginella moellendorffii]
          Length = 101

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 35/84 (41%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
 Frame = -3

Query: 241 VLMAVVSEL--ANASSITMYRLGGCGGETRTYSRCGCSNL--LYMGGYQFRYTGQSARMY 74
           V++ VV  +  ANAS    +   GC      YS CGC+N+     GGY F Y GQ+A  Y
Sbjct: 10  VVLVVVGSMITANASYFDTWAGPGCNNRLERYSACGCTNVGASQHGGYSFGYQGQTAAAY 69

Query: 73  NTGNCLGGSVFTFNGNSRQCSGVG 2
           NT NC G +   F+G+ + CSG G
Sbjct: 70  NTANCQGVAHTRFSGSVQDCSGFG 93


>ref|XP_002981967.1| hypothetical protein SELMODRAFT_115352 [Selaginella moellendorffii]
           gi|300150409|gb|EFJ17060.1| hypothetical protein
           SELMODRAFT_115352 [Selaginella moellendorffii]
          Length = 84

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
 Frame = -3

Query: 214 ANASSITMYRLGGCGGETRTYSRCGCSNL--LYMGGYQFRYTGQSARMYNTGNCLGGSVF 41
           ANAS    +   GC      YS CGC+N+     GGY F Y GQ+A  YNT NC G +  
Sbjct: 4   ANASYFDAWAGPGCNNRLERYSACGCTNVGASQHGGYSFAYQGQTAAAYNTANCQGVAHT 63

Query: 40  TFNGNSRQCSGVG 2
            F+G+ + CSG G
Sbjct: 64  RFSGSVQDCSGFG 76


>pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimicrobial
           Protein
          Length = 76

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/68 (39%), Positives = 38/68 (55%)
 Frame = -3

Query: 205 SSITMYRLGGCGGETRTYSRCGCSNLLYMGGYQFRYTGQSARMYNTGNCLGGSVFTFNGN 26
           S+ T++   GC      YS+CGCS +   GGY F YTGQ+A +YN   C G +   F  +
Sbjct: 1   SAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGCSGVAHTRFGSS 60

Query: 25  SRQCSGVG 2
           +R C+  G
Sbjct: 61  ARACNPFG 68


>gb|ADJ53037.1| antimicrobial peptide 1 [Pinus pinaster]
          Length = 105

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
 Frame = -3

Query: 238 LMAVVSELANASSITMYRLGGCGGETRTYSRCGCSNLL--YMGGYQFRYTGQSARMYNTG 65
           L   +++ +  S  T +   GC      YS+CGCSN+     GGY+F Y GQ+A  YNT 
Sbjct: 16  LFLALAQPSEGSYFTAWAGPGCNNHAARYSKCGCSNIGNDVHGGYEFVYQGQTASAYNTA 75

Query: 64  NCLGGSVFTFNGNSRQ-CSGVG 2
           NC G +   F+G+  Q CSG G
Sbjct: 76  NCKGVAQTRFSGSVNQACSGFG 97


Top