BLASTX nr result

ID: Atractylodes22_contig00048772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00048772
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_174669.1| uncharacterized protein [Arabidopsis thaliana] ...    62   5e-08
ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana] ...    62   6e-08
gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    58   7e-07
gb|AAC28209.1| contains similarity to reverse transcriptases [Ar...    55   4e-06

>ref|NP_174669.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10086469|gb|AAG12529.1|AC015446_10 Hypothetical
           Protein [Arabidopsis thaliana]
           gi|332193548|gb|AEE31669.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 308

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
 Frame = +3

Query: 3   ADSLADVDTKISDQDLVLQILQNLPPSYQSLVDVITHTKPFPSFLEAKNMLLLHESREDH 182
           ADSL +VD  ++D++LV+ +L  L P + ++++VI H +PFPSF +A  ML   E R   
Sbjct: 142 ADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPFPSFDDAATMLQEEEDRLKR 201

Query: 183 ---PEPTADTHLSPSSALFSTSA 242
              P PT   H S S+ L  + A
Sbjct: 202 AIKPNPTHVDHSSSSTVLACSEA 224


>ref|NP_199616.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10177756|dbj|BAB11069.1| unnamed protein product
           [Arabidopsis thaliana] gi|332008231|gb|AED95614.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 369

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
 Frame = +3

Query: 3   ADSLADVDTKISDQDLVLQILQNLPPSYQSLVDVITHTKPFPSFLEAKNMLLLHESREDH 182
           +D L +VD+ ISD+ LV+ +L  L   Y  +++VI H  PFPSF EA++MLL+ ESR  +
Sbjct: 144 SDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFPSFTEARSMLLMEESRLSN 203

Query: 183 PEPTA---DTHLSPSSALFS 233
              ++     H S S+ LF+
Sbjct: 204 KSKSSLSHTNHPSLSNVLFT 223


>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/74 (39%), Positives = 44/74 (59%)
 Frame = +3

Query: 3   ADSLADVDTKISDQDLVLQILQNLPPSYQSLVDVITHTKPFPSFLEAKNMLLLHESREDH 182
           AD LA++D  ++D+ LV+ +L  L   + S+++VI H  PF SFLE ++ML L E R   
Sbjct: 143 ADLLANIDFPVTDRALVMHMLNGLSDKFDSIINVIKHKSPFLSFLETRSMLQLEEDRLSK 202

Query: 183 PEPTADTHLSPSSA 224
               +D H   SS+
Sbjct: 203 QIKPSDVHHDTSSS 216


>gb|AAC28209.1| contains similarity to reverse transcriptases [Arabidopsis
           thaliana] gi|7267168|emb|CAB77880.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 467

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/74 (35%), Positives = 46/74 (62%)
 Frame = +3

Query: 3   ADSLADVDTKISDQDLVLQILQNLPPSYQSLVDVITHTKPFPSFLEAKNMLLLHESREDH 182
           +D LA+VD+ +SD+ +V  +L  L   + +++++I H +PFPSF  A++ML+  E R   
Sbjct: 72  SDLLANVDSPVSDRVVVTHMLNGLSEKFDNIINIIKHRQPFPSFSVARSMLIEEERRLSK 131

Query: 183 PEPTADTHLSPSSA 224
              T  +H + SS+
Sbjct: 132 QVKTGSSHSANSSS 145


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