BLASTX nr result

ID: Atractylodes22_contig00047741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047741
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD39354.2| OSJNBa0059H15.5 [Oryza sativa Japonica Group]         123   2e-26
gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subc...   122   3e-26
gb|ABA97776.1| retrotransposon protein, putative, Ty3-gypsy subc...   120   9e-26
gb|ABA98207.1| retrotransposon protein, putative, Ty3-gypsy subc...   120   9e-26
gb|AAX96265.1| retrotransposon protein, putative, Ty3-gypsy sub-...   120   9e-26

>emb|CAD39354.2| OSJNBa0059H15.5 [Oryza sativa Japonica Group]
          Length = 1466

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/83 (72%), Positives = 68/83 (81%)
 Frame = +3

Query: 3    FLGLAGYYRRFVENFSRIALPMTQLLKKETKFAWGIKQDESFEELKRRLVTAPVLALPYG 182
            FLGLAGYYRRF+ENFS+IA PMTQLLKKE KF W  + + SFEELKRRLV+APVL LP  
Sbjct: 858  FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQ 917

Query: 183  PGGYQVYSDASGTGLGCVLMQNG 251
              G+Q+Y DAS  GLGCVLMQ+G
Sbjct: 918  TKGFQIYCDASRQGLGCVLMQDG 940


>gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1548

 Score =  122 bits (306), Expect = 3e-26
 Identities = 60/83 (72%), Positives = 68/83 (81%)
 Frame = +3

Query: 3    FLGLAGYYRRFVENFSRIALPMTQLLKKETKFAWGIKQDESFEELKRRLVTAPVLALPYG 182
            FLGLAGYYRRF+ENFS+IA PMTQLLKKE KF W ++ + SFEELKRRLV+APVL LP  
Sbjct: 844  FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWSVECNRSFEELKRRLVSAPVLILPDQ 903

Query: 183  PGGYQVYSDASGTGLGCVLMQNG 251
               +QVY DAS  GLGCVLMQ+G
Sbjct: 904  TKDFQVYCDASRQGLGCVLMQDG 926


>gb|ABA97776.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1406

 Score =  120 bits (302), Expect = 9e-26
 Identities = 60/83 (72%), Positives = 67/83 (80%)
 Frame = +3

Query: 3    FLGLAGYYRRFVENFSRIALPMTQLLKKETKFAWGIKQDESFEELKRRLVTAPVLALPYG 182
            FLGLAGYYRRF+ENFS+IA PMTQLLKKE KF W  + + SFEELKRRLV+APVL LP  
Sbjct: 870  FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQ 929

Query: 183  PGGYQVYSDASGTGLGCVLMQNG 251
               +QVY DAS  GLGCVLMQ+G
Sbjct: 930  TKDFQVYCDASRQGLGCVLMQDG 952


>gb|ABA98207.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1562

 Score =  120 bits (302), Expect = 9e-26
 Identities = 60/83 (72%), Positives = 67/83 (80%)
 Frame = +3

Query: 3    FLGLAGYYRRFVENFSRIALPMTQLLKKETKFAWGIKQDESFEELKRRLVTAPVLALPYG 182
            FLGLAGYYRRF+ENFS+IA PMTQLLKKE KF W  + + SFEELKRRLV+APVL LP  
Sbjct: 858  FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQ 917

Query: 183  PGGYQVYSDASGTGLGCVLMQNG 251
               +QVY DAS  GLGCVLMQ+G
Sbjct: 918  TKDFQVYCDASRQGLGCVLMQDG 940


>gb|AAX96265.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|77550571|gb|ABA93368.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1333

 Score =  120 bits (302), Expect = 9e-26
 Identities = 60/83 (72%), Positives = 67/83 (80%)
 Frame = +3

Query: 3    FLGLAGYYRRFVENFSRIALPMTQLLKKETKFAWGIKQDESFEELKRRLVTAPVLALPYG 182
            FLGLAGYYRRF+ENFS+IA PMTQLLKKE KF W  + + SFEELKRRLV+APVL LP  
Sbjct: 768  FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWSAECNRSFEELKRRLVSAPVLILPDQ 827

Query: 183  PGGYQVYSDASGTGLGCVLMQNG 251
               +QVY DAS  GLGCVLMQ+G
Sbjct: 828  TKDFQVYCDASRQGLGCVLMQDG 850


Top