BLASTX nr result

ID: Atractylodes22_contig00047707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00047707
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chl...   172   3e-41
emb|CBI27426.3| unnamed protein product [Vitis vinifera]              172   3e-41
ref|XP_002514548.1| rubisco subunit binding-protein beta subunit...   169   2e-40
ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 6...   165   4e-39
ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chl...   165   4e-39

>ref|XP_002269341.2| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like [Vitis
           vinifera]
          Length = 610

 Score =  172 bits (436), Expect = 3e-41
 Identities = 88/108 (81%), Positives = 96/108 (88%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3   RGYLSKYF-TDRRTMKVEFQDCKLLLVDKIITNPKEMYGILDIAVKGNYPIVIIAEGIEQ 179
           RGYLS YF TDR+ M VEF DCKLLLVDK ITNPKEM+ ILD AVK  YPIVI+AEGIEQ
Sbjct: 223 RGYLSPYFVTDRQKMMVEFHDCKLLLVDKKITNPKEMFKILDNAVKEKYPIVIVAEGIEQ 282

Query: 180 DALAPVIRNKLKGVLKAAAIKAPAFGEHKSHYLDDIAILTGGTVVRDD 323
           +ALAPVIRNKL+GVLKAAAIKAPAFGE KSHYLDD+AILTGGTV+ D+
Sbjct: 283 EALAPVIRNKLRGVLKAAAIKAPAFGERKSHYLDDLAILTGGTVISDE 330


>emb|CBI27426.3| unnamed protein product [Vitis vinifera]
          Length = 584

 Score =  172 bits (436), Expect = 3e-41
 Identities = 88/108 (81%), Positives = 96/108 (88%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3   RGYLSKYF-TDRRTMKVEFQDCKLLLVDKIITNPKEMYGILDIAVKGNYPIVIIAEGIEQ 179
           RGYLS YF TDR+ M VEF DCKLLLVDK ITNPKEM+ ILD AVK  YPIVI+AEGIEQ
Sbjct: 197 RGYLSPYFVTDRQKMMVEFHDCKLLLVDKKITNPKEMFKILDNAVKEKYPIVIVAEGIEQ 256

Query: 180 DALAPVIRNKLKGVLKAAAIKAPAFGEHKSHYLDDIAILTGGTVVRDD 323
           +ALAPVIRNKL+GVLKAAAIKAPAFGE KSHYLDD+AILTGGTV+ D+
Sbjct: 257 EALAPVIRNKLRGVLKAAAIKAPAFGERKSHYLDDLAILTGGTVISDE 304


>ref|XP_002514548.1| rubisco subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis] gi|223546152|gb|EEF47654.1| rubisco
           subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis]
          Length = 592

 Score =  169 bits (428), Expect = 2e-40
 Identities = 86/108 (79%), Positives = 94/108 (87%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3   RGYLSKYF-TDRRTMKVEFQDCKLLLVDKIITNPKEMYGILDIAVKGNYPIVIIAEGIEQ 179
           RGYLS YF TDRR M VEF +CKLLLVDK ITNPKEM+ ILD AVK  YPIV++AEGIEQ
Sbjct: 232 RGYLSPYFVTDRRKMTVEFHNCKLLLVDKKITNPKEMFKILDNAVKEKYPIVVVAEGIEQ 291

Query: 180 DALAPVIRNKLKGVLKAAAIKAPAFGEHKSHYLDDIAILTGGTVVRDD 323
           +ALAPVIRNKL+G LKAAAIKAPAFGE K HYLDDIAILTG TV+RD+
Sbjct: 292 EALAPVIRNKLRGALKAAAIKAPAFGERKGHYLDDIAILTGATVIRDE 339


>ref|XP_004155289.1| PREDICTED: LOW QUALITY PROTEIN: chaperonin 60 subunit beta 4,
           chloroplastic-like [Cucumis sativus]
          Length = 597

 Score =  165 bits (417), Expect = 4e-39
 Identities = 86/108 (79%), Positives = 94/108 (87%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3   RGYLSKYF-TDRRTMKVEFQDCKLLLVDKIITNPKEMYGILDIAVKGNYPIVIIAEGIEQ 179
           RGYLS YF TDRR M VEF +CKLLLVDK I++PKEM+ ILD AVK  YPIVI+AEGIE 
Sbjct: 244 RGYLSPYFVTDRRKMVVEFHECKLLLVDKKISDPKEMFKILDNAVKEKYPIVILAEGIEP 303

Query: 180 DALAPVIRNKLKGVLKAAAIKAPAFGEHKSHYLDDIAILTGGTVVRDD 323
           +ALAPVIRNKL+GVLKAAAIKAPAFGE KSHYLDDIA LTG TVVR+D
Sbjct: 304 EALAPVIRNKLRGVLKAAAIKAPAFGERKSHYLDDIATLTGATVVRED 351


>ref|XP_004135135.1| PREDICTED: chaperonin 60 subunit beta 4, chloroplastic-like
           [Cucumis sativus]
          Length = 597

 Score =  165 bits (417), Expect = 4e-39
 Identities = 86/108 (79%), Positives = 94/108 (87%), Gaps = 1/108 (0%)
 Frame = +3

Query: 3   RGYLSKYF-TDRRTMKVEFQDCKLLLVDKIITNPKEMYGILDIAVKGNYPIVIIAEGIEQ 179
           RGYLS YF TDRR M VEF +CKLLLVDK I++PKEM+ ILD AVK  YPIVI+AEGIE 
Sbjct: 244 RGYLSPYFVTDRRKMVVEFHECKLLLVDKKISDPKEMFKILDNAVKEKYPIVILAEGIEP 303

Query: 180 DALAPVIRNKLKGVLKAAAIKAPAFGEHKSHYLDDIAILTGGTVVRDD 323
           +ALAPVIRNKL+GVLKAAAIKAPAFGE KSHYLDDIA LTG TVVR+D
Sbjct: 304 EALAPVIRNKLRGVLKAAAIKAPAFGERKSHYLDDIATLTGATVVRED 351


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