BLASTX nr result

ID: Atractylodes22_contig00045448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045448
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]        62   3e-09
ref|XP_003545301.1| PREDICTED: uncharacterized protein LOC100820...    56   4e-09
ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...    63   3e-08
ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789...    52   1e-07
gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]       55   2e-07

>gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]
          Length = 635

 Score = 62.0 bits (149), Expect(2) = 3e-09
 Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
 Frame = +3

Query: 237 TSVRKSTRVHRSP-YLKDYHCNLVQEKY---NKGNVLYPLSKNLGYELLTGRQKESALAL 404
           +++R S+R  +SP YL+DY CN         NK  +LYPLS  + ++ L+  Q   AL+L
Sbjct: 35  STLRVSSRTKKSPSYLQDYICNPSTNSVSSANKSCILYPLSNFISHKHLSNSQHTFALSL 94

Query: 405 TVNVEPKSYK*AIESGEWVQAMNDELAVME 494
             ++EPKSY  AI+S  W QAM  EL  ++
Sbjct: 95  VSHIEPKSYAEAIKSDCWKQAMQLELNALD 124



 Score = 24.3 bits (51), Expect(2) = 3e-09
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 505 TWSVVDLPEGKKHVRCR 555
           TW+VVD+P   K + C+
Sbjct: 128 TWTVVDIPSQVKPIGCK 144


>ref|XP_003545301.1| PREDICTED: uncharacterized protein LOC100820591 [Glycine max]
          Length = 1057

 Score = 55.8 bits (133), Expect(2) = 4e-09
 Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = +3

Query: 243 VRKSTRVHRSP-YLKDYHCNLVQEKYNKGNVLYPLSKNLGYELLTGRQKESALALTVNVE 419
           +R+ST+V  +P YL D+HC  V  + NK  V YP+  +L Y  L+   K     ++ N E
Sbjct: 437 LRRSTKVSNTPKYLIDFHCYNVT-RTNK--VTYPIQHHLDYSKLSNSHKHYICQISENHE 493

Query: 420 PKSYK*AIESGEWVQAMNDELAVMEANQ 503
           P++Y  AI+   W +A++ EL  ME N+
Sbjct: 494 PQTYSQAIKHKPWQEAISTELMAMELNK 521



 Score = 30.0 bits (66), Expect(2) = 4e-09
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +1

Query: 493 KLIKTWSVVDLPEGKKHVRCR 555
           +L KTW++V  P+GKK + C+
Sbjct: 518 ELNKTWTIVPFPQGKKPISCK 538


>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
 Frame = +3

Query: 147  NLDSRTDLEDCG-EPTYEEPVMKEGVVDANVTSVRKSTRVHRSP-YLKDYHCNLVQEKYN 320
            NLD +  +E+C  +PT   P   E   +  +  +R+STR   +P YL+DYH +L     N
Sbjct: 1183 NLDPQ--IENCSSQPTISVPSSNEPSNEQPLPHLRRSTRAKNTPTYLQDYHRDLASSTPN 1240

Query: 321  KGNVL-YPLSKNLGYELLTGRQKESALALTVNVEPKSYK*AIESGEWVQAMNDELAVMEA 497
               ++ YPLS  L Y  L+   +   +++++  EP SY  A     W++AM  EL  +++
Sbjct: 1241 TSAIVRYPLSSVLSYSRLSPAHRNFVMSISLTAEPTSYTEASRHDCWIKAMKVELQALQS 1300

Query: 498  N 500
            N
Sbjct: 1301 N 1301


>ref|XP_003549005.1| PREDICTED: uncharacterized protein LOC100789964 [Glycine max]
          Length = 2412

 Score = 51.6 bits (122), Expect(2) = 1e-07
 Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
 Frame = +3

Query: 246  RKSTRVHRSP-YLKDYHCNLVQE---KYNKGNVLYPLSKNLGYELLTGRQKESALALTVN 413
            RKS R+ + P YL +YHCNL+       N G   YPLS  L Y+  +   K   L+ +  
Sbjct: 1114 RKSHRLTKPPAYLFEYHCNLLSSILSASNPGKSPYPLSSVLSYDKCSPCHKRFCLSFSSL 1173

Query: 414  VEPKSYK*AIESGEWVQAMNDEL 482
             EPK+YK A +   W  AM  EL
Sbjct: 1174 TEPKTYKQACKFDCWNLAMKSEL 1196



 Score = 28.9 bits (63), Expect(2) = 1e-07
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 505  TWSVVDLPEGKKHVRCR 555
            TWSVVDL EGK+ + C+
Sbjct: 1204 TWSVVDLHEGKQPIGCK 1220


>gb|ABD32757.1| Integrase, catalytic region [Medicago truncatula]
          Length = 1157

 Score = 55.1 bits (131), Expect(2) = 2e-07
 Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
 Frame = +3

Query: 246  RKSTRV-HRSPYLKDYHCNLVQEKYNKGN---VLYPLSKNLGYELLTGRQKESALALTVN 413
            R S+R+ H  P+ KDY C       +  N   V YP+S  L Y  L+      AL+LT +
Sbjct: 794  RISSRIKHSPPHFKDYICQSSSSSSSNNNTHVVSYPISHYLSYNKLSNDHLHFALSLTTH 853

Query: 414  VEPKSYK*AIESGEWVQAMNDELAVME 494
             EPKSY  A +   W +AM  ELA +E
Sbjct: 854  TEPKSYTEASKFDCWNKAMETELAALE 880



 Score = 25.4 bits (54), Expect(2) = 2e-07
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 499 IKTWSVVDLPEGKKHVRCR 555
           I TW +VDLP   K + CR
Sbjct: 882 IGTWKLVDLPPNIKPIGCR 900