BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00045170
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB82754.1| retrofit [Oryza longistaminata]                        201   2e-49
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...   201   3e-49
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                  199   1e-48
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]                  198   1e-48
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p...   198   1e-48

>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score =  201 bits (511), Expect = 2e-49
 Identities = 109/292 (37%), Positives = 153/292 (52%), Gaps = 6/292 (2%)
 Frame = +3

Query: 54   QRPVCQVCSKPGHTALTCWHRFNQAFQASPPASLTPEANYSVAPIGTSTADGQYSSNNLW 233
            +RP CQVC K GHTA  CW+RF++ + A                   + A   Y  +  W
Sbjct: 276  RRPTCQVCFKRGHTAADCWYRFDEDYVADEKL--------------VAAATNSYGIDTNW 321

Query: 234  YPDTGANQHMTGDLHLFDTSSSYNXXXXXXXXXXXXLPIKHTGSSTISTASGKFHLSQLL 413
            Y DTGA  H+TG+L    T   YN            + I H G + + T S   HL+ +L
Sbjct: 322  YIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIHLNNVL 381

Query: 414  HVPSITKNLLSVSRFCRDHNIYFQFHSNHFLVKDQNSQVTLLRGDSNNGLYVLPSF---- 581
            +VP   KNL+S S+   D++ + + HS  F +KDQ ++  LL G   +GLY +P F    
Sbjct: 382  YVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQVTRDVLLEGKCRHGLYPIPKFFGRS 441

Query: 582  PQPEAYIGERTSLSNWHSRLGHPSLRLVQHIISKYSLPI-YGSRPQHQCSSCRSAKXXXX 758
               +A    + SLS WHSRLGHPSL +V+ +IS+ +LP    S  Q  C++C+ AK    
Sbjct: 442  TNKQALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNACQEAKSHQL 501

Query: 759  XXXXXXXXXXXXFYLVFSDVWGPSPVLSSLGYN-YYVVFVDDFTKYSWLFPL 911
                          LVFSDVWGP+P   S+G N YYV F+DDF+K++W++ L
Sbjct: 502  PYIRSTSVSQFPLELVFSDVWGPAP--ESVGRNKYYVSFIDDFSKFTWIYLL 551


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
            gi|531389|gb|AAA57005.1| copia-like retrotransposon
            Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score =  201 bits (510), Expect = 3e-49
 Identities = 107/290 (36%), Positives = 152/290 (52%), Gaps = 5/290 (1%)
 Frame = +3

Query: 57   RPVCQVCSKPGHTALTCWHRFNQAFQASPPASLTPEANYSVAPIGTSTADGQYSSNNLWY 236
            RP CQVCS+ GHTAL CW+RF++              NY       ++A  Q  SN  WY
Sbjct: 279  RPRCQVCSRVGHTALNCWYRFDE--------------NYVPDQRSANSAAHQNGSNVPWY 324

Query: 237  PDTGANQHMTGDLHLFDTSSSYNXXXXXXXXXXXXLPIKHTGSSTISTASGKFHLSQLLH 416
             DTGA  H+TGDL        Y             + I + G++ + T+S   HL  +LH
Sbjct: 325  TDTGATDHITGDLDRLTMHDKYTGTDQIIAANGTGMTISNIGNAIVPTSSRSLHLRSVLH 384

Query: 417  VPSITKNLLSVSRFCRDHNIYFQFHSNHFLVKDQNSQVTLLRGDSNNGLYVLPSFPQ--- 587
            VPS  KNL+SV R   D++++ +FHS+HFL+KD+ ++  LL G   +GLY LP  P    
Sbjct: 385  VPSTHKNLISVHRLTNDNDVFIEFHSSHFLIKDRQTKAVLLHGKCRDGLYPLPPHPDLRL 444

Query: 588  PEAYIGERTSLSNWHSRLGHPSLRLVQHIISKYSLP-IYGSRPQHQCSSCRSAKXXXXXX 764
               +   R  L +WH RLGHPS  +V  +IS  +LP +  +     C +C  AK      
Sbjct: 445  KHNFSSTRVPLEHWHKRLGHPSRDIVHRVISNNNLPCLSNNSTTSVCDACLQAKAHQLPY 504

Query: 765  XXXXXXXXXXFYLVFSDVWGPSPVLSSLG-YNYYVVFVDDFTKYSWLFPL 911
                        L+FSDV+GP+  + S G Y YYV F+DD++K++W++ L
Sbjct: 505  TISMSQSSAPLMLIFSDVFGPA--IDSFGRYKYYVSFIDDYSKFTWIYLL 552


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score =  199 bits (505), Expect = 1e-48
 Identities = 111/292 (38%), Positives = 156/292 (53%), Gaps = 6/292 (2%)
 Frame = +3

Query: 54   QRPVCQVCSKPGHTALTCWHRFNQAFQASPPASLTPEANYSVAPIGTSTADGQYSSNNLW 233
            +RP CQVC K GHTA  CW+RF++ + A    +              + A   Y  +  W
Sbjct: 277  RRPTCQVCFKRGHTAADCWYRFDEDYVADEKLA--------------AAATNSYGIDTNW 322

Query: 234  YPDTGANQHMTGDLHLFDTSSSYNXXXXXXXXXXXXLPIKHTGSSTISTASGKFHLSQLL 413
            Y DTGA  H+TG+L    T   YN            + I H G +T+ T S   HL+ +L
Sbjct: 323  YIDTGATDHITGELEKLTTKEKYNGNEQIHTASGAGMDISHIGHTTVHTPSRNIHLNNVL 382

Query: 414  HVPSITKNLLSVSRFCRDHNIYFQFHSNHFLVKDQNSQVTLLRGDSNNGLYVLP-SF--- 581
            +VP   K+L+S S+   D++ + + HS  F +KDQ ++  LL G   +GLY +P SF   
Sbjct: 383  YVPQAKKSLISASQLATDNSAFLELHSKFFSIKDQVTKDILLEGRCRHGLYPIPKSFGRT 442

Query: 582  PQPEAYIGERTSLSNWHSRLGHPSLRLVQHIISKYSLPI-YGSRPQHQCSSCRSAKXXXX 758
               +A    + SLS WHSRLGHPSL +V+ +ISK +LP    S  Q  C++C+ AK    
Sbjct: 443  TSKQALGTTKLSLSRWHSRLGHPSLPIVKQVISKNNLPCSVESVNQSVCNACQEAKSRQL 502

Query: 759  XXXXXXXXXXXXFYLVFSDVWGPSPVLSSLGYN-YYVVFVDDFTKYSWLFPL 911
                          LVFSDVWGP+P   S+G N YYV F+DDF+K++W++ L
Sbjct: 503  PYVRSTSVSQFPLELVFSDVWGPAP--ESVGRNKYYVSFIDDFSKFTWIYLL 552


>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
          Length = 1448

 Score =  198 bits (504), Expect = 1e-48
 Identities = 110/292 (37%), Positives = 154/292 (52%), Gaps = 6/292 (2%)
 Frame = +3

Query: 54   QRPVCQVCSKPGHTALTCWHRFNQAFQASPPASLTPEANYSVAPIGTSTADGQYSSNNLW 233
            +RP CQVC K GHTA  CW+RF++ + A                   + A   Y  +  W
Sbjct: 280  RRPTCQVCFKRGHTAADCWYRFDEDYVADEKL--------------VAAATNSYGIDTNW 325

Query: 234  YPDTGANQHMTGDLHLFDTSSSYNXXXXXXXXXXXXLPIKHTGSSTISTASGKFHLSQLL 413
            Y DTGA  H+TG+L    T   YN            + I H G + + T S   HL+ +L
Sbjct: 326  YIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIHLNNVL 385

Query: 414  HVPSITKNLLSVSRFCRDHNIYFQFHSNHFLVKDQNSQVTLLRGDSNNGLYVLP-SF--- 581
            +VP   KNL+S S+   D++ + + HS  F +KDQ ++  LL G   +GLY +P SF   
Sbjct: 386  YVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQVTRDVLLEGKCRHGLYPIPKSFGRS 445

Query: 582  PQPEAYIGERTSLSNWHSRLGHPSLRLVQHIISKYSLPI-YGSRPQHQCSSCRSAKXXXX 758
               +A    + SLS WHSRLGHPSL +V+ +IS+ +LP    S  Q  C++C+ AK    
Sbjct: 446  TNKQALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNACQEAKSHQL 505

Query: 759  XXXXXXXXXXXXFYLVFSDVWGPSPVLSSLGYN-YYVVFVDDFTKYSWLFPL 911
                          LVFSDVWGP+P   S+G N YYV F+DDF+K++W++ L
Sbjct: 506  PYIRSTSVSQFPLELVFSDVWGPAP--ESVGRNKYYVSFIDDFSKFTWIYLL 555


>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
            sativa Japonica Group]
          Length = 1448

 Score =  198 bits (504), Expect = 1e-48
 Identities = 110/292 (37%), Positives = 154/292 (52%), Gaps = 6/292 (2%)
 Frame = +3

Query: 54   QRPVCQVCSKPGHTALTCWHRFNQAFQASPPASLTPEANYSVAPIGTSTADGQYSSNNLW 233
            +RP CQVC K GHTA  CW+RF++ + A                   + A   Y  +  W
Sbjct: 280  RRPTCQVCFKRGHTAADCWYRFDEDYVADEKL--------------VAAATNSYGIDTNW 325

Query: 234  YPDTGANQHMTGDLHLFDTSSSYNXXXXXXXXXXXXLPIKHTGSSTISTASGKFHLSQLL 413
            Y DTGA  H+TG+L    T   YN            + I H G + + T S   HL+ +L
Sbjct: 326  YIDTGATDHITGELEKLTTKEKYNGGEQIHTASGAGMDISHIGHTIVHTPSRNIHLNNVL 385

Query: 414  HVPSITKNLLSVSRFCRDHNIYFQFHSNHFLVKDQNSQVTLLRGDSNNGLYVLP-SF--- 581
            +VP   KNL+S S+   D++ + + HS  F +KDQ ++  LL G   +GLY +P SF   
Sbjct: 386  YVPQAKKNLISASQLAADNSAFLELHSKFFSIKDQVTRDVLLEGKCRHGLYPIPKSFGRS 445

Query: 582  PQPEAYIGERTSLSNWHSRLGHPSLRLVQHIISKYSLPI-YGSRPQHQCSSCRSAKXXXX 758
               +A    + SLS WHSRLGHPSL +V+ +IS+ +LP    S  Q  C++C+ AK    
Sbjct: 446  TNKQALGAAKLSLSRWHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNACQEAKSHQL 505

Query: 759  XXXXXXXXXXXXFYLVFSDVWGPSPVLSSLGYN-YYVVFVDDFTKYSWLFPL 911
                          LVFSDVWGP+P   S+G N YYV F+DDF+K++W++ L
Sbjct: 506  PYIRSTSVSQFPLELVFSDVWGPAP--ESVGRNKYYVSFIDDFSKFTWIYLL 555