BLASTX nr result

ID: Atractylodes22_contig00044465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00044465
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containi...   231   6e-59
ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|2...   225   3e-57
ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containi...   221   5e-56
ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   219   2e-55
ref|XP_003619016.1| Pentatricopeptide repeat-containing protein ...   217   7e-55

>ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 989

 Score =  231 bits (588), Expect = 6e-59
 Identities = 108/137 (78%), Positives = 123/137 (89%)
 Frame = -3

Query: 415  YGLVPRAEHYACVVDILGRSGLLSRALEFIKTMPIEPDAMVWRTLLSACTVHKNKEMGEI 236
            +GLVP+ EHY CVVD+LGR+ LL  A EFI+ MPIEPDAM+WRTLLSACTVHKN E+GE 
Sbjct: 748  HGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEF 807

Query: 235  SAKHLLELEPEDSATYVLLSNMYAVSGKWDDRNWTRKLMKDRGVKKVPGRSWIEVKNTVH 56
            +A+HLLELEPEDSATYVLLSNMYAVSGKWD R+ TR++MKDRGVKK PGRSWIEVKN++H
Sbjct: 808  AARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVKNSIH 867

Query: 55   AFFVGDRLHPLTNEIYE 5
            AFFVGDRLHPL  +IYE
Sbjct: 868  AFFVGDRLHPLAEQIYE 884


>ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|222857540|gb|EEE95087.1|
            predicted protein [Populus trichocarpa]
          Length = 989

 Score =  225 bits (574), Expect = 3e-57
 Identities = 104/137 (75%), Positives = 124/137 (90%)
 Frame = -3

Query: 415  YGLVPRAEHYACVVDILGRSGLLSRALEFIKTMPIEPDAMVWRTLLSACTVHKNKEMGEI 236
            +GLVP+  HYACVVD++ R+G LSRA +FI+ MPIEPDA +WRTLLSACTVHKN E+GE 
Sbjct: 748  HGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVHKNVEVGEF 807

Query: 235  SAKHLLELEPEDSATYVLLSNMYAVSGKWDDRNWTRKLMKDRGVKKVPGRSWIEVKNTVH 56
            +A+HLLELEPEDSATYVLLSNMYAVSGKWD R+ TR++M++RGVKK PGRSWIEVKN+VH
Sbjct: 808  AAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSWIEVKNSVH 867

Query: 55   AFFVGDRLHPLTNEIYE 5
            AF+VGDRLHPL ++IYE
Sbjct: 868  AFYVGDRLHPLADKIYE 884


>ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  221 bits (563), Expect = 5e-56
 Identities = 101/137 (73%), Positives = 120/137 (87%)
 Frame = -3

Query: 415  YGLVPRAEHYACVVDILGRSGLLSRALEFIKTMPIEPDAMVWRTLLSACTVHKNKEMGEI 236
            + LVP++EHY CVVD+LGR+G L RA+E+IK MPI  DAM+WRTLLSAC +HKN E+GE 
Sbjct: 796  HDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGER 855

Query: 235  SAKHLLELEPEDSATYVLLSNMYAVSGKWDDRNWTRKLMKDRGVKKVPGRSWIEVKNTVH 56
            +A HLLELEPEDSATYVL+SN+YAVS +W  R+W+RKLMKDRGVKK PGRSWIEVKN VH
Sbjct: 856  AAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWIEVKNAVH 915

Query: 55   AFFVGDRLHPLTNEIYE 5
            AF+ GD+LHPLTN+IYE
Sbjct: 916  AFYAGDKLHPLTNQIYE 932


>ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  219 bits (557), Expect = 2e-55
 Identities = 100/137 (72%), Positives = 119/137 (86%)
 Frame = -3

Query: 415  YGLVPRAEHYACVVDILGRSGLLSRALEFIKTMPIEPDAMVWRTLLSACTVHKNKEMGEI 236
            + LVP++EHY CVVD+LGR+G L RA+E+IK MPI  DAM+WRTLLSAC +HKN E+GE 
Sbjct: 796  HDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGER 855

Query: 235  SAKHLLELEPEDSATYVLLSNMYAVSGKWDDRNWTRKLMKDRGVKKVPGRSWIEVKNTVH 56
            +A HLLELEPEDSATYVL+SN+YAVS +W  R+W+RKLMKD GVKK PGRSWIEVKN VH
Sbjct: 856  AAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWIEVKNAVH 915

Query: 55   AFFVGDRLHPLTNEIYE 5
            AF+ GD+LHPLTN+IYE
Sbjct: 916  AFYAGDKLHPLTNQIYE 932


>ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355494031|gb|AES75234.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  217 bits (553), Expect = 7e-55
 Identities = 101/137 (73%), Positives = 119/137 (86%)
 Frame = -3

Query: 415  YGLVPRAEHYACVVDILGRSGLLSRALEFIKTMPIEPDAMVWRTLLSACTVHKNKEMGEI 236
            + LVP+ EHYACVVD+LGRSGLLSRA  F++ MPI+PDAMVWRTLLSAC VHKN ++GE 
Sbjct: 758  HNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEF 817

Query: 235  SAKHLLELEPEDSATYVLLSNMYAVSGKWDDRNWTRKLMKDRGVKKVPGRSWIEVKNTVH 56
            +A HLLELEP+DSATYVL+SNMYAVSGKWD R+ TR++MKDRGVKK PGRSW+EV N+VH
Sbjct: 818  AASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVH 877

Query: 55   AFFVGDRLHPLTNEIYE 5
            AFF GD+ HP  + IYE
Sbjct: 878  AFFAGDQNHPRADMIYE 894


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