BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00044278
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ric...   263   2e-68
ref|XP_002321910.1| predicted protein [Populus trichocarpa] gi|2...   248   5e-64
ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   244   9e-63
ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   244   1e-62
ref|NP_568435.2| transducin/WD40 domain-containing protein [Arab...   243   2e-62

>ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
           gi|223531761|gb|EEF33581.1| ubiquitin ligase protein
           cop1, putative [Ricinus communis]
          Length = 426

 Score =  263 bits (671), Expect = 2e-68
 Identities = 114/184 (61%), Positives = 148/184 (80%), Gaps = 5/184 (2%)
 Frame = +1

Query: 1   GKCVATVQLG-----SPVCCVEFSPFGGALVAVGCADRKAYAYDVRKIDNPVAVFDGHER 165
           G CVATV+         VC VEF+PFGG+++AVGCADR+ Y YDVR I NPV V DGH++
Sbjct: 238 GGCVATVKPSVTSSCRAVCSVEFNPFGGSIIAVGCADRRVYGYDVRMITNPVFVLDGHKK 297

Query: 166 TVSYTRFLDDDRVMTSGTDGCLKMWDIKDQTLIRTYRGHTNRRRFVGLSVWRNQGLIGCG 345
           TV+Y RF+D+  + ++G DGCLK+W+++D  L+RTY+GH N R FVGLSVWRN GL+GCG
Sbjct: 298 TVTYVRFMDNGTLASAGIDGCLKLWNLQDSQLLRTYKGHLNSRNFVGLSVWRNGGLLGCG 357

Query: 346 SESNQVFIYDKRWSEPIWVHGFEPRSEYGFVSSICWSQEGEDECTLVSGGPDGVVKIFSG 525
           SE+NQVF+YDKRWSEPIW +G  P +++GFV+S+CWSQ GED CTLV+GG +GV+++F G
Sbjct: 358 SENNQVFVYDKRWSEPIWAYGSGPAADHGFVNSVCWSQVGEDRCTLVTGGSNGVLQVFEG 417

Query: 526 KRKP 537
           KRKP
Sbjct: 418 KRKP 421


>ref|XP_002321910.1| predicted protein [Populus trichocarpa] gi|222868906|gb|EEF06037.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score =  248 bits (634), Expect = 5e-64
 Identities = 112/190 (58%), Positives = 144/190 (75%), Gaps = 9/190 (4%)
 Frame = +1

Query: 1   GKCVATVQLG---SPVCCVEFSPFGGALVAVGCADRKAYAYDVRKIDNPVAVFDGHERTV 171
           G+CVATVQ     S VCCVEF+PFGG +VA+GCADRK Y YD+R + +PV V DGH +TV
Sbjct: 54  GECVATVQPSVRRSAVCCVEFNPFGGPIVAIGCADRKVYGYDLRMMADPVFVLDGHRKTV 113

Query: 172 SYTRFLDDDRVMTSGTDGCLKMWDIKDQTLIRTYRGHTNRRRFVGLSVWRNQGLIGCGSE 351
           +Y +FLD+  ++++  DGCLK+W+  +  +IRTY GH N R FVGLSVWRN GL+GCGSE
Sbjct: 114 TYIKFLDNATLVSASIDGCLKLWNSDNSNVIRTYHGHVNNRNFVGLSVWRNGGLLGCGSE 173

Query: 352 SNQVFIYDKRWSEPIWVHGF------EPRSEYGFVSSICWSQEGEDECTLVSGGPDGVVK 513
           +N+VF+YDKRWSEP+WVH        + R   GFVSS+CW Q GED+CTLV+GG DG+++
Sbjct: 174 NNKVFVYDKRWSEPVWVHESSSPIMGKDRCGSGFVSSVCWRQVGEDQCTLVTGGSDGILQ 233

Query: 514 IFSGKRKPLT 543
           +F GKRK  T
Sbjct: 234 VFRGKRKTRT 243


>ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 382

 Score =  244 bits (623), Expect = 9e-63
 Identities = 109/173 (63%), Positives = 134/173 (77%), Gaps = 4/173 (2%)
 Frame = +1

Query: 28  GSPVCCVEFSPFGGALVAVGCADRKAYAYDVRKIDNPVAVFDGHERTVSYTRFLDDDRVM 207
           G  VCCVEF+PFGG LVAVGCADR+AY YDVRK+ +PV +FDGH++ V+Y RFLD+  ++
Sbjct: 208 GGAVCCVEFNPFGGPLVAVGCADRRAYGYDVRKMVDPVLIFDGHQKPVTYVRFLDEHMMV 267

Query: 208 TSGTDGCLKMWDIKDQTLIRTYRGHTNRRRFVGLSVWRNQGLIGCGSESNQVFIYDKRWS 387
           TSGTDGCL++W + D  +IR Y GH N R FVGLSVWR  GL+GCGSE+N VF+YDKRWS
Sbjct: 268 TSGTDGCLRLWSMHDARMIRVYMGHMNTRNFVGLSVWRTGGLLGCGSENNHVFVYDKRWS 327

Query: 388 EPIWVHGFEPRSEYG----FVSSICWSQEGEDECTLVSGGPDGVVKIFSGKRK 534
           EPIWVH F   S  G    FVSS+CW Q G+D CTLV+GG DG +++  GKR+
Sbjct: 328 EPIWVHEFGGGSRDGCDPKFVSSVCWRQVGKDVCTLVAGGSDGSLQVILGKRR 380


>ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 383

 Score =  244 bits (622), Expect = 1e-62
 Identities = 110/174 (63%), Positives = 135/174 (77%), Gaps = 5/174 (2%)
 Frame = +1

Query: 28  GSPVCCVEFSPFGGALVAVGCADRKAYAYDVRKIDNPVAVFDGHERTVSYTRFLDDDRVM 207
           GS VCCVEF+PFGG L+AVGCADR+AY YDVRK+ +PV +FDGH++TV+Y RFLD   ++
Sbjct: 208 GSAVCCVEFNPFGGPLIAVGCADRRAYGYDVRKMVDPVLIFDGHQKTVTYVRFLDQHTMV 267

Query: 208 TSGTDGCLKMWDIKDQTLIRTYRGHTNRRRFVGLSVWRNQGLIGCGSESNQVFIYDKRWS 387
           TSGTDGCL++W + D  +IR Y GH N R FVGLSVWR  GL+GCGSE+N VF+YDKRW 
Sbjct: 268 TSGTDGCLRLWSMHDARMIRVYMGHMNTRSFVGLSVWRTGGLLGCGSENNHVFVYDKRWG 327

Query: 388 EPIWVHGFEPRSEYG----FVSSICWSQ-EGEDECTLVSGGPDGVVKIFSGKRK 534
           EPIWVH F   S  G    FVSS+CW Q  GED CTLV+GG DG++++  GK+K
Sbjct: 328 EPIWVHEFGVGSRDGRDPNFVSSVCWRQVGGEDGCTLVAGGSDGILEVIVGKKK 381


>ref|NP_568435.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|10176840|dbj|BAB10046.1| unnamed protein product
           [Arabidopsis thaliana] gi|332005822|gb|AED93205.1|
           transducin/WD40 domain-containing protein [Arabidopsis
           thaliana]
          Length = 368

 Score =  243 bits (621), Expect = 2e-62
 Identities = 107/174 (61%), Positives = 131/174 (75%), Gaps = 5/174 (2%)
 Frame = +1

Query: 31  SPVCCVEFSPFGGALVAVGCADRKAYAYDVRKIDNPVAVFDGHERTVSYTRFLDDDRVMT 210
           S VCCVEF P GG  VAVGCADRK Y YD+RK+ +P     GH +TVSY RFLD   V+T
Sbjct: 195 SAVCCVEFDPSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSYVRFLDGGTVVT 254

Query: 211 SGTDGCLKMWDIKDQTLIRTYRGHTNRRRFVGLSVWRNQGLIGCGSESNQVFIYDKRWSE 390
           +GTDGCLK+W ++D  +IRTY GH N R FVGLSVWRN  L GCGSE+N+VF+YD+RW +
Sbjct: 255 AGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRRWGK 314

Query: 391 PIWVHGFEP-----RSEYGFVSSICWSQEGEDECTLVSGGPDGVVKIFSGKRKP 537
           P+WV GFEP      S+  FVSS+CW Q G D+CTLV+GG DGV++++ GKRKP
Sbjct: 315 PVWVDGFEPVGMNSGSDKRFVSSVCWRQSGVDQCTLVAGGSDGVLQVYVGKRKP 368