BLASTX nr result

ID: Atractylodes22_contig00044141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00044141
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_398372.1| Ycf2 [Lactuca sativa] gi|81176311|ref|YP_398388...   303   1e-80
ref|YP_588161.1| Ycf2 [Helianthus annuus] gi|94502554|ref|YP_588...   301   7e-80
ref|YP_004465231.1| hypothetical chloroplast RF21 [Jacobaea vulg...   300   1e-79
ref|YP_001837404.1| Ycf2 [Guizotia abyssinica] gi|183217801|ref|...   300   2e-79
ref|YP_004564434.1| hypothetical chloroplast RF21 (chloroplast) ...   298   6e-79

>ref|YP_398372.1| Ycf2 [Lactuca sativa] gi|81176311|ref|YP_398388.1| Ycf2 [Lactuca
            sativa] gi|109896301|sp|Q332R7.1|YCF2_LACSA RecName:
            Full=Protein ycf2 gi|78675213|dbj|BAE47639.1| ycf2
            protein [Lactuca sativa] gi|78675229|dbj|BAE47655.1| ycf2
            [Lactuca sativa] gi|88657026|gb|ABD47276.1| hypothetical
            chloroplast RF2 [Lactuca sativa]
            gi|88657046|gb|ABD47296.1| hypothetical chloroplast RF2
            [Lactuca sativa]
          Length = 2264

 Score =  303 bits (777), Expect = 1e-80
 Identities = 141/149 (94%), Positives = 144/149 (96%), Gaps = 1/149 (0%)
 Frame = -1

Query: 559  VGFGNIPIHRSEIYIYELKGPNDPQFLESIGLQIVHLKKLKPFLLDDHETCQKSKFLLNG 380
            V FGNIPIHRSEIYIYELKGPNDPQFLESIGLQIVHLKKLKPFLLDDHETCQKSKFL+NG
Sbjct: 885  VSFGNIPIHRSEIYIYELKGPNDPQFLESIGLQIVHLKKLKPFLLDDHETCQKSKFLING 944

Query: 379  GTISPFLFNMIPKWMIDSFHTRNNRKKSIDNTDSYFSMIFHDQYNWLNPVKSFHRSSLR- 203
            GTISPFLFN IPKWMIDSFHTRNNR+KS DNTDSYFSMIFHDQYNWLNPVKSFHRSSLR 
Sbjct: 945  GTISPFLFNKIPKWMIDSFHTRNNRRKSFDNTDSYFSMIFHDQYNWLNPVKSFHRSSLRS 1004

Query: 202  SFYKANQLRFLNNPHHFCFYCNKRFPFKI 116
            SFYKANQLRFLNNPHHFCFYCNKRFPF +
Sbjct: 1005 SFYKANQLRFLNNPHHFCFYCNKRFPFYV 1033


>ref|YP_588161.1| Ycf2 [Helianthus annuus] gi|94502554|ref|YP_588180.1| Ycf2
            [Helianthus annuus] gi|109896300|sp|Q1KXP6.1|YCF2_HELAN
            RecName: Full=Protein ycf2 gi|88656938|gb|ABD47189.1|
            hypothetical chloroplast RF2 [Helianthus annuus]
            gi|88656958|gb|ABD47209.1| hypothetical chloroplast RF2
            [Helianthus annuus]
          Length = 2131

 Score =  301 bits (770), Expect = 7e-80
 Identities = 139/149 (93%), Positives = 143/149 (95%), Gaps = 1/149 (0%)
 Frame = -1

Query: 559  VGFGNIPIHRSEIYIYELKGPNDPQFLESIGLQIVHLKKLKPFLLDDHETCQKSKFLLNG 380
            V FGNIPIHRSEIYIY+LKGPNDPQFLESIGLQIVHLKKLKPFLLDDHETCQKSKFL+NG
Sbjct: 733  VSFGNIPIHRSEIYIYQLKGPNDPQFLESIGLQIVHLKKLKPFLLDDHETCQKSKFLING 792

Query: 379  GTISPFLFNMIPKWMIDSFHTRNNRKKSIDNTDSYFSMIFHDQYNWLNPVKSFHRSSLR- 203
            GTISPFLFN IPKWMIDSFHTRNNR+KS DNTDSYFSMIFHDQYNWLNPVKSFHRSSLR 
Sbjct: 793  GTISPFLFNKIPKWMIDSFHTRNNRRKSFDNTDSYFSMIFHDQYNWLNPVKSFHRSSLRS 852

Query: 202  SFYKANQLRFLNNPHHFCFYCNKRFPFKI 116
            SFYK NQLRFLNNPHHFCFYCNKRFPF +
Sbjct: 853  SFYKGNQLRFLNNPHHFCFYCNKRFPFYV 881


>ref|YP_004465231.1| hypothetical chloroplast RF21 [Jacobaea vulgaris]
            gi|334702389|ref|YP_004465251.1| hypothetical chloroplast
            RF21 [Jacobaea vulgaris] gi|308156127|gb|ADO15455.1|
            hypothetical chloroplast RF21 [Jacobaea vulgaris]
            gi|308156147|gb|ADO15475.1| hypothetical chloroplast RF21
            [Jacobaea vulgaris]
          Length = 2216

 Score =  300 bits (769), Expect = 1e-79
 Identities = 140/149 (93%), Positives = 143/149 (95%), Gaps = 1/149 (0%)
 Frame = -1

Query: 559  VGFGNIPIHRSEIYIYELKGPNDPQFLESIGLQIVHLKKLKPFLLDDHETCQKSKFLLNG 380
            V FGNIPI RSEIYIYELKGPNDPQFLESIGLQIVHLKKLKPFLLDDHETCQKSKFL+NG
Sbjct: 828  VSFGNIPIQRSEIYIYELKGPNDPQFLESIGLQIVHLKKLKPFLLDDHETCQKSKFLING 887

Query: 379  GTISPFLFNMIPKWMIDSFHTRNNRKKSIDNTDSYFSMIFHDQYNWLNPVKSFHRSSLR- 203
            GTISPFLFN IPKWMIDSFHTRNNR+KS DNTDSYFSMIFHDQYNWLNPVKSFHRSSLR 
Sbjct: 888  GTISPFLFNKIPKWMIDSFHTRNNRRKSFDNTDSYFSMIFHDQYNWLNPVKSFHRSSLRS 947

Query: 202  SFYKANQLRFLNNPHHFCFYCNKRFPFKI 116
            SFYKANQLRFLNNPHHFCFYCNKRFPF +
Sbjct: 948  SFYKANQLRFLNNPHHFCFYCNKRFPFYV 976


>ref|YP_001837404.1| Ycf2 [Guizotia abyssinica] gi|183217801|ref|YP_001837421.1| Ycf2
            [Guizotia abyssinica] gi|205412917|sp|B2LMN7.1|YCF2_GUIAB
            RecName: Full=Protein ycf2 gi|179366299|gb|ACB86570.1|
            hypothetical chloroplast RF21 [Guizotia abyssinica]
            gi|179366316|gb|ACB86587.1| hypothetical chloroplast RF21
            [Guizotia abyssinica]
          Length = 2276

 Score =  300 bits (767), Expect = 2e-79
 Identities = 139/149 (93%), Positives = 142/149 (95%), Gaps = 1/149 (0%)
 Frame = -1

Query: 559  VGFGNIPIHRSEIYIYELKGPNDPQFLESIGLQIVHLKKLKPFLLDDHETCQKSKFLLNG 380
            V FGNIPIHRSEIYIYELKGPNDPQFLESIGLQIVHLKKLKPFLLDDHETCQKSKFL+NG
Sbjct: 888  VSFGNIPIHRSEIYIYELKGPNDPQFLESIGLQIVHLKKLKPFLLDDHETCQKSKFLING 947

Query: 379  GTISPFLFNMIPKWMIDSFHTRNNRKKSIDNTDSYFSMIFHDQYNWLNPVKSFHRSSLR- 203
            GTISPFLFN IPKWMIDSFHTR NR+KS DNTDSYFSMIFHDQYNWLNPVKSFHRSSLR 
Sbjct: 948  GTISPFLFNKIPKWMIDSFHTRKNRRKSFDNTDSYFSMIFHDQYNWLNPVKSFHRSSLRS 1007

Query: 202  SFYKANQLRFLNNPHHFCFYCNKRFPFKI 116
            SFYK NQLRFLNNPHHFCFYCNKRFPF +
Sbjct: 1008 SFYKGNQLRFLNNPHHFCFYCNKRFPFYV 1036


>ref|YP_004564434.1| hypothetical chloroplast RF21 (chloroplast) [Ageratina adenophora]
            gi|334089736|gb|AEG64619.1| hypothetical chloroplast RF21
            (chloroplast) [Ageratina adenophora]
          Length = 2248

 Score =  298 bits (762), Expect = 6e-79
 Identities = 138/149 (92%), Positives = 142/149 (95%), Gaps = 1/149 (0%)
 Frame = -1

Query: 559  VGFGNIPIHRSEIYIYELKGPNDPQFLESIGLQIVHLKKLKPFLLDDHETCQKSKFLLNG 380
            V FGNIPIHRSEIYIYELKGPNDPQFLESI LQIVHLKKLKPFLLDDHETCQKSKFL+NG
Sbjct: 885  VSFGNIPIHRSEIYIYELKGPNDPQFLESIDLQIVHLKKLKPFLLDDHETCQKSKFLING 944

Query: 379  GTISPFLFNMIPKWMIDSFHTRNNRKKSIDNTDSYFSMIFHDQYNWLNPVKSFHRSSLR- 203
            GTISPFLFN IPKWMIDSFHTRNNR+KS +NTDSYFSMIFHDQYNWLNPVKSFHRSSLR 
Sbjct: 945  GTISPFLFNKIPKWMIDSFHTRNNRRKSFENTDSYFSMIFHDQYNWLNPVKSFHRSSLRS 1004

Query: 202  SFYKANQLRFLNNPHHFCFYCNKRFPFKI 116
            SFYK NQLRFLNNPHHFCFYCNKRFPF +
Sbjct: 1005 SFYKGNQLRFLNNPHHFCFYCNKRFPFYV 1033


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