BLASTX nr result

ID: Atractylodes22_contig00042995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042995
         (449 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein A...    74   1e-11
ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
            predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
 Frame = +1

Query: 1    RVLL*PHLRHTIGDGRGTFAWL----PSGPICSLIDVDTIEDLGFRSRAKVRDIWEDGSW 168
            R L  P +++ IGDG  T  W     P  P+        I D G    AKV  + ++  W
Sbjct: 1097 RSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEW 1156

Query: 169  RWP----LAWHGRVVPLSIDSIPTPSNR---DRDQVKWVNYEGKEVNFTVKEVWNCIRSR 327
            + P    + WH    P+ I++IP+ SN     +D++ W+  +     F VK  W  +R  
Sbjct: 1157 KTPTTQAIGWH----PI-IEAIPSNSNPKMGQKDEIVWL--DSPNHRFLVKVAWEHLRRH 1209

Query: 328  GPTVWWWKLV*HSQKIPKHAFTLWMAFRDRLLTQARM 438
               V W  +V     +P+H+F LWMA + +L TQ ++
Sbjct: 1210 RQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKL 1246


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
 Frame = +1

Query: 1   RVLL*PHLRHTIGDGRGTFAWL----PSGPICSLIDVDTIEDLGFRSRAKVRDIWEDGSW 168
           R L  P +++ IGDG  T  W     P  P+        I D G    AKV  + ++  W
Sbjct: 224 RSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEW 283

Query: 169 RWP----LAWHGRVVPLSIDSIPTPSNR---DRDQVKWVNYEGKEVNFTVKEVWNCIRSR 327
           + P    + WH    P+ I++IP+ SN     +D++ W+  +     F+VK  W  +R  
Sbjct: 284 KTPTTQAIGWH----PI-IEAIPSNSNPKMGQKDELVWL--DSPNHRFSVKVAWEQLRRH 336

Query: 328 GPTVWWWKLV*HSQKIPKHAFTLWMAFRDRLLTQARM 438
              V W  +V     +P+H+F LWMA + +L TQ ++
Sbjct: 337 RQMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKL 373


>ref|XP_004173856.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
           sativus]
          Length = 342

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 50/151 (33%), Positives = 66/151 (43%), Gaps = 13/151 (8%)
 Frame = +1

Query: 34  IGDGRGTFAWL----PSGPICSLIDVDTIEDLGFRSRAKVRDIW-EDGSWRWPLAWHGRV 198
           +G+GR    WL      GPI        I D G R   ++ D    +G WRW L      
Sbjct: 93  VGNGRKCRVWLVPWIQGGPIIQQFGERVIYDAGSRWDVRLVDFMGRNGDWRWSL------ 146

Query: 199 VPLSIDSI--------PTPSNRDRDQVKWVNYEGKEVNFTVKEVWNCIRSRGPTVWWWKL 354
           V L +  I        P+PS  DR    WV   G   +F++   W  IR     V W  L
Sbjct: 147 VSLDLMDIWDRVQGVRPSPSVEDR----WVWVPGSRDSFSITSAWETIRPHSSRVGWSGL 202

Query: 355 V*HSQKIPKHAFTLWMAFRDRLLTQARMAEW 447
           +     IPKH+F  W+A RDRL T+ R++ W
Sbjct: 203 LWGGGNIPKHSFCAWLAIRDRLSTRDRLSRW 233


>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
            predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
 Frame = +1

Query: 1    RVLL*PHLRHTIGDGRGTFAWL----PSGPICSLIDVDTIEDLGFRSRAKVRDIWEDGSW 168
            R L  P +++ IGDG  T  W     P  P+        I D G    AKV  + ++  W
Sbjct: 757  RSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEW 816

Query: 169  RWP----LAWHGRVVPLSIDSIPTPSNR---DRDQVKWVNYEGKEVNFTVKEVWNCIRSR 327
            + P    + WH    P+ I++IP+ SN     +D++ W+  +     F+VK  W  +R  
Sbjct: 817  KTPTTQAIGWH----PI-IEAIPSNSNPKMGQKDEIIWL--DSPNHRFSVKVAWEQLRRH 869

Query: 328  GPTVWWWKLV*HSQKIPKHAFTLWMAFRDRLLTQARM 438
               V W  +V     +P+H+F LWM  + +L TQ ++
Sbjct: 870  RQLVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKL 906


>ref|XP_002313562.1| predicted protein [Populus trichocarpa] gi|222849970|gb|EEE87517.1|
           predicted protein [Populus trichocarpa]
          Length = 331

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 11/157 (7%)
 Frame = +1

Query: 1   RVLL*PHLRHTIGDGRGTFAWL----PSGPICSLIDVDTIEDLGFRSRAKVRDIWEDGSW 168
           R L  P +++ IGDG  T  W     P  P+        I D G    AKV  + ++  W
Sbjct: 42  RSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVLIQNSEW 101

Query: 169 RWP----LAWHGRVVPLSIDSIPTPSNR---DRDQVKWVNYEGKEVNFTVKEVWNCIRSR 327
           + P    + WH    P+ I++IP+ SN     +D++ W+  +     F+VK  W  +R  
Sbjct: 102 KTPTTQAIGWH----PI-IEAIPSNSNPKMGQKDEIVWL--DSPNHRFSVKVAWEQLRRH 154

Query: 328 GPTVWWWKLV*HSQKIPKHAFTLWMAFRDRLLTQARM 438
              V W  +V     +P+H+F LWM  + +L TQ ++
Sbjct: 155 RHMVEWHDIVWFKNAVPRHSFLLWMVVQQKLTTQDKL 191