BLASTX nr result

ID: Atractylodes22_contig00042325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042325
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60534.1| hypothetical protein VITISV_013154 [Vitis vinifera]    66   3e-09
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    60   1e-07
emb|CAN76848.1| hypothetical protein VITISV_007375 [Vitis vinifera]    57   1e-06
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group...    56   4e-06
ref|XP_003560991.1| PREDICTED: ABC transporter C family member 1...    55   5e-06

>emb|CAN60534.1| hypothetical protein VITISV_013154 [Vitis vinifera]
          Length = 262

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = +1

Query: 184 SWYFNTGATDHVTPDLNKLNISYEYHGDDKLSVGNGNQLFISH 312
           SWY N+GAT HVT +L  L + YEYHG+DKL VGNGN+L I+H
Sbjct: 209 SWYANSGATSHVTTELGNLLMKYEYHGEDKLVVGNGNKLLITH 251


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/45 (60%), Positives = 34/45 (75%)
 Frame = +1

Query: 178 DPSWYFNTGATDHVTPDLNKLNISYEYHGDDKLSVGNGNQLFISH 312
           D SWY +TGAT H+TP+LNKLN    + G DK+ VGNGN+L IS+
Sbjct: 297 DESWYMDTGATHHLTPNLNKLNSHTPFAGSDKVMVGNGNRLNISN 341


>emb|CAN76848.1| hypothetical protein VITISV_007375 [Vitis vinifera]
          Length = 532

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = +1

Query: 178 DPSWYFNTGATDHVTPDLNKLNISYEYHGDDKLSVGNGNQLFISH 312
           D SWY N+GAT+HVT +L  L++   YHG DKL V N N+L I+H
Sbjct: 477 DQSWYANSGATNHVTVELENLSMKSNYHGKDKLVVDNSNKLSITH 521


>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108708884|gb|ABF96679.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 1437

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/46 (50%), Positives = 34/46 (73%)
 Frame = +1

Query: 175 VDPSWYFNTGATDHVTPDLNKLNISYEYHGDDKLSVGNGNQLFISH 312
           VD +WY +TGATDHVT +L+KL +  +YHG+D++   +G  + ISH
Sbjct: 315 VDTNWYLDTGATDHVTGELDKLTVRDKYHGNDQVHTASGAGMEISH 360


>ref|XP_003560991.1| PREDICTED: ABC transporter C family member 13-like [Brachypodium
           distachyon]
          Length = 2064

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 23/40 (57%), Positives = 28/40 (70%)
 Frame = +1

Query: 175 VDPSWYFNTGATDHVTPDLNKLNISYEYHGDDKLSVGNGN 294
           VDP WY +T ATDH + DLNKLNI  +YHG D +   NG+
Sbjct: 305 VDPYWYADTAATDHFSNDLNKLNIKEQYHGKDTVQTANGS 344


Top