BLASTX nr result

ID: Atractylodes22_contig00042243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042243
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containi...   168   5e-40
ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   166   1e-39
ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containi...   166   2e-39
gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsu...   166   2e-39
ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containi...   160   1e-37

>ref|XP_003528453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score =  168 bits (425), Expect = 5e-40
 Identities = 78/118 (66%), Positives = 100/118 (84%)
 Frame = -2

Query: 354 EGQLAYASMIQDYGIVPKMEHHVSMVDMLGRAGLLNEAYQHIQDMNPVKPGAAVWTAMVG 175
           EG+L +ASM Q+YG+VP +EHHV MVDM GR GLLNEAYQ ++ ++  +   AVWTAM+G
Sbjct: 328 EGRLVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVRGLSSEELVPAVWTAMLG 387

Query: 174 ACKMHKNVDLGVVAAENLLAIEPQHPGHYVLLSNVYAMAGQMDQVEMVRDVMIRKGLK 1
           ACKMHKN DLGV  AENL++ EP++PGHYVLLSN+YA+AG+MD+VE VR+VMI++GLK
Sbjct: 388 ACKMHKNFDLGVEVAENLISAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLK 445


>ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33760-like [Vitis vinifera]
          Length = 561

 Score =  166 bits (421), Expect = 1e-39
 Identities = 77/110 (70%), Positives = 97/110 (88%)
 Frame = -2

Query: 330 MIQDYGIVPKMEHHVSMVDMLGRAGLLNEAYQHIQDMNPVKPGAAVWTAMVGACKMHKNV 151
           M QDYG+VP++EHHV MVDMLGRAG LNEA+Q+I+D+   +   A+WTAM+GACKMHKN+
Sbjct: 315 MRQDYGLVPRVEHHVCMVDMLGRAGFLNEAFQYIKDLKQGEQAPALWTAMLGACKMHKNL 374

Query: 150 DLGVVAAENLLAIEPQHPGHYVLLSNVYAMAGQMDQVEMVRDVMIRKGLK 1
           DLGV  AE+LLA EP++P HYVLLSNVYA+AG+M++VEMVR++MIRKGLK
Sbjct: 375 DLGVQVAEHLLAAEPENPSHYVLLSNVYALAGRMERVEMVRNMMIRKGLK 424


>ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/118 (66%), Positives = 98/118 (83%)
 Frame = -2

Query: 354 EGQLAYASMIQDYGIVPKMEHHVSMVDMLGRAGLLNEAYQHIQDMNPVKPGAAVWTAMVG 175
           EG+  +ASM Q+YG+VP +EHHV MVDM GR GLLNEAYQ ++ +N  +   AVWTAM+G
Sbjct: 328 EGRSVFASMKQEYGVVPGVEHHVCMVDMFGRGGLLNEAYQFVKGLNSDELVPAVWTAMLG 387

Query: 174 ACKMHKNVDLGVVAAENLLAIEPQHPGHYVLLSNVYAMAGQMDQVEMVRDVMIRKGLK 1
           ACKMHKN DLGV  AENL+  EP++PGHYVLLSN+YA+AG+MD+VE VR+VMI++GLK
Sbjct: 388 ACKMHKNFDLGVEVAENLINAEPENPGHYVLLSNMYALAGRMDRVESVRNVMIQRGLK 445


>gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227463002|gb|ACP39953.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 592

 Score =  166 bits (420), Expect = 2e-39
 Identities = 76/118 (64%), Positives = 99/118 (83%)
 Frame = -2

Query: 354 EGQLAYASMIQDYGIVPKMEHHVSMVDMLGRAGLLNEAYQHIQDMNPVKPGAAVWTAMVG 175
           EG+  + +M Q+YG+VP +EH V MVDMLGRAG LNEAYQ I++ +P +P  AVWTAM+G
Sbjct: 338 EGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAVWTAMLG 397

Query: 174 ACKMHKNVDLGVVAAENLLAIEPQHPGHYVLLSNVYAMAGQMDQVEMVRDVMIRKGLK 1
           ACKMHKN DLGV  AE+LL+IEP++PGHYV+LSN+YA+AG+MD+VE +R++MIR  LK
Sbjct: 398 ACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIRNRLK 455


>ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 663

 Score =  160 bits (404), Expect = 1e-37
 Identities = 71/118 (60%), Positives = 100/118 (84%)
 Frame = -2

Query: 354 EGQLAYASMIQDYGIVPKMEHHVSMVDMLGRAGLLNEAYQHIQDMNPVKPGAAVWTAMVG 175
           +G+  ++SM + YG+VP +EH+V MVDM GRAGLLN+AYQ I+   P +PG AVWT+M+G
Sbjct: 409 DGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVWTSMLG 468

Query: 174 ACKMHKNVDLGVVAAENLLAIEPQHPGHYVLLSNVYAMAGQMDQVEMVRDVMIRKGLK 1
           AC+MH+N DLGV  AE++L++EP++PGHYV+LSN+YA+AG+MD+VEMVR++M R+ LK
Sbjct: 469 ACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRRRLK 526


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