BLASTX nr result

ID: Atractylodes22_contig00042187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042187
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004940542.1| rps11 gene product (chloroplast) [Boea hygro...    87   1e-15
ref|YP_006665813.1| ribosomal protein S11 (chloroplast) [Elodea ...    86   2e-15
gb|AEX94775.1| ribosomal protein S11 (chloroplast) [Doryanthes p...    86   2e-15
gb|ABU85443.1| ribosomal protein S11 [Musa acuminata]                  86   2e-15
ref|YP_007507144.1| ribosomal protein S11 (chloroplast) [Salvia ...    86   3e-15

>ref|YP_004940542.1| rps11 gene product (chloroplast) [Boea hygrometrica]
           gi|340549440|gb|AEK53262.1| ribosomal protein S11
           (chloroplast) [Boea hygrometrica]
          Length = 138

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 42/53 (79%), Positives = 47/53 (88%)
 Frame = -3

Query: 237 SILATVYHDIHQQAKVMIKGPGLGRDAALRAIRRSGILLTFVRDVTPMPHNGC 79
           +++ TV     Q+A+VMIKGPGLGRDAALRAIRRSGILLTFVRDVTPMPHNGC
Sbjct: 78  NVIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVRDVTPMPHNGC 130


>ref|YP_006665813.1| ribosomal protein S11 (chloroplast) [Elodea canadensis]
           gi|374094630|gb|AEY84686.1| ribosomal protein S11
           (chloroplast) [Elodea canadensis]
          Length = 138

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 42/59 (71%), Positives = 50/59 (84%)
 Frame = -3

Query: 255 SNSSNISILATVYHDIHQQAKVMIKGPGLGRDAALRAIRRSGILLTFVRDVTPMPHNGC 79
           + ++ I+ + TV     Q+A+VMIKGPGLGRDAALRAIRRSGILL+FVRDVTPMPHNGC
Sbjct: 72  AQAAAINAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGC 130


>gb|AEX94775.1| ribosomal protein S11 (chloroplast) [Doryanthes palmeri]
          Length = 138

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 42/59 (71%), Positives = 50/59 (84%)
 Frame = -3

Query: 255 SNSSNISILATVYHDIHQQAKVMIKGPGLGRDAALRAIRRSGILLTFVRDVTPMPHNGC 79
           + ++ I+ + TV     Q+A+VMIKGPGLGRDAALRAIRRSGILL+FVRDVTPMPHNGC
Sbjct: 72  AQAAAINAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGC 130


>gb|ABU85443.1| ribosomal protein S11 [Musa acuminata]
          Length = 138

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/59 (69%), Positives = 51/59 (86%)
 Frame = -3

Query: 255 SNSSNISILATVYHDIHQQAKVMIKGPGLGRDAALRAIRRSGILLTFVRDVTPMPHNGC 79
           + ++ ++ + TV +   Q+A+VMIKGPGLGRDAALRAIRRSGILL+FVRDVTPMPHNGC
Sbjct: 72  AQAAALNAIRTVVNQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGC 130


>ref|YP_007507144.1| ribosomal protein S11 (chloroplast) [Salvia miltiorrhiza]
           gi|401879774|gb|AFQ30961.1| ribosomal protein S11
           (chloroplast) [Salvia miltiorrhiza]
          Length = 138

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/51 (82%), Positives = 45/51 (88%)
 Frame = -3

Query: 231 LATVYHDIHQQAKVMIKGPGLGRDAALRAIRRSGILLTFVRDVTPMPHNGC 79
           + TV     Q+A+VMIKGPGLGRDAALRAIRRSGILLTFVRDVTPMPHNGC
Sbjct: 80  IRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVRDVTPMPHNGC 130


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