BLASTX nr result

ID: Atractylodes22_contig00042047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00042047
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19367.3| unnamed protein product [Vitis vinifera]              169   4e-40
ref|XP_002300284.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...   164   1e-38
ref|XP_002522113.1| protein binding protein, putative [Ricinus c...   150   2e-34
ref|XP_003545351.1| PREDICTED: pre-mRNA-processing factor 40 hom...   142   5e-32

>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  169 bits (427), Expect = 4e-40
 Identities = 92/195 (47%), Positives = 116/195 (59%), Gaps = 1/195 (0%)
 Frame = +2

Query: 8   QTFSVPDGQPSRPVLSVSPQAQQAVPRPNNYMPGPSGPRXXXXXXXXXXXXXXXQPQIHV 187
           Q   +P  Q +RP+ S SPQ  Q  P  N++MPG +GP                QPQ  +
Sbjct: 100 QPIPMPYIQQNRPLTSSSPQPNQTAPPLNSHMPGLAGPGMPFSSSYTFAPASFGQPQSTI 159

Query: 188 NAEAANQYQQTSANMPSFPLGGPAWSSDGQTSKA-VTPVLQPAEQISVVPSVPVTMDAPK 364
           NA A  Q+Q  S      P+GG  W S G  S A VTPV Q  +Q SV   +P   + P 
Sbjct: 160 NASA--QFQPIS--QMHAPVGGQPWLSSGSQSGALVTPVHQAGQQPSVTADIPAG-NVPN 214

Query: 365 VVVKAPSVWIEHTARSGKRYYYNKKTKVSCWEKPFDLMSPIERADASTDWKELTDPDGRK 544
              ++ S W EHT+  G+RYYYNKKT++S WEKP +LM+PIERADAST WKE T P+GRK
Sbjct: 215 PTHQSSSDWQEHTSADGRRYYYNKKTRLSSWEKPLELMTPIERADASTVWKEFTTPEGRK 274

Query: 545 YYYNKLTRQSTWKMP 589
           YYYNK+T+QS W +P
Sbjct: 275 YYYNKVTKQSKWTIP 289


>ref|XP_002300284.1| predicted protein [Populus trichocarpa] gi|222847542|gb|EEE85089.1|
           predicted protein [Populus trichocarpa]
          Length = 972

 Score =  167 bits (423), Expect = 1e-39
 Identities = 87/197 (44%), Positives = 117/197 (59%), Gaps = 2/197 (1%)
 Frame = +2

Query: 5   PQTFSVPDGQPSRPVLSVSPQAQQAVPRPNNYMPGPSGPRXXXXXXXXXXXXXXXQPQIH 184
           PQ   +P+ QP+R V+S SP    +V  PN+YMPG  GP                QP + 
Sbjct: 76  PQAIPLPNAQPNRHVMSGSPLPPPSVQTPNSYMPGLGGPGVPLSSSYTFAPSSYGQPPVT 135

Query: 185 VNAEAANQYQ-QTSANMPSFPLGGPAWSSDGQTSKAVTPVLQPAEQISVVPS-VPVTMDA 358
            NA    Q+Q     ++   P GG   SS    +  VTP+ +  EQ SV  + V  T   
Sbjct: 136 FNA--VTQFQPMPQMHVQPIPTGGHPASSMNHNTAPVTPIQRNGEQSSVTTTNVRATSIQ 193

Query: 359 PKVVVKAPSVWIEHTARSGKRYYYNKKTKVSCWEKPFDLMSPIERADASTDWKELTDPDG 538
           PK   +A + W EHT+ +G+R+YYNK+T+ S WEKP++L++PIERADASTDWKE   PDG
Sbjct: 194 PKPTEEALTEWKEHTSANGRRFYYNKRTRQSSWEKPYELLTPIERADASTDWKEFKSPDG 253

Query: 539 RKYYYNKLTRQSTWKMP 589
           RKYYYNK+T+QS W++P
Sbjct: 254 RKYYYNKVTKQSKWEIP 270


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
           vinifera]
          Length = 1020

 Score =  164 bits (414), Expect = 1e-38
 Identities = 92/196 (46%), Positives = 116/196 (59%), Gaps = 2/196 (1%)
 Frame = +2

Query: 8   QTFSVPDGQPSRPVLSVSPQAQQAVPRPNNYMPGPSGPRXXXXXXXXXXXXXXXQPQIHV 187
           Q   +P  Q +RP+ S SPQ  Q  P  N++MPG   P                QPQ  +
Sbjct: 114 QPIPMPYIQQNRPLTSSSPQPNQTAPPLNSHMPGLFAPASFG------------QPQSTI 161

Query: 188 NAEAANQYQQTSANMPSFPLGGPAWSSDGQTSKA-VTPVLQPAEQISVVPSVPVTM-DAP 361
           NA A  Q+Q  S      P+GG  W S G  S A VTPV Q  +Q SV   +PV+  + P
Sbjct: 162 NASA--QFQPIS--QMHAPVGGQPWLSSGSQSGALVTPVHQAGQQPSVTADIPVSAGNVP 217

Query: 362 KVVVKAPSVWIEHTARSGKRYYYNKKTKVSCWEKPFDLMSPIERADASTDWKELTDPDGR 541
               ++ S W EHT+  G+RYYYNKKT++S WEKP +LM+PIERADAST WKE T P+GR
Sbjct: 218 NPTHQSSSDWQEHTSADGRRYYYNKKTRLSSWEKPLELMTPIERADASTVWKEFTTPEGR 277

Query: 542 KYYYNKLTRQSTWKMP 589
           KYYYNK+T+QS W +P
Sbjct: 278 KYYYNKVTKQSKWTIP 293


>ref|XP_002522113.1| protein binding protein, putative [Ricinus communis]
           gi|223538712|gb|EEF40313.1| protein binding protein,
           putative [Ricinus communis]
          Length = 956

 Score =  150 bits (378), Expect = 2e-34
 Identities = 86/196 (43%), Positives = 107/196 (54%), Gaps = 2/196 (1%)
 Frame = +2

Query: 8   QTFSVPDGQPSRPVLSVSPQAQQAVPRPNNYMPGPSGPRXXXXXXXXXXXXXXXQPQIHV 187
           Q  S+P+ Q +R V S S     +VP   NY PG  GP                QP +  
Sbjct: 80  QVISLPNAQANRHVTSGSSLPPPSVPTSINYAPGLGGPGAPLSSSYTFVPSSYGQPPVAA 139

Query: 188 NAEAANQYQQTSA-NMPSFPLGGPAWSSD-GQTSKAVTPVLQPAEQISVVPSVPVTMDAP 361
           N    +QYQ  S    PS P GG A SS   Q+   VTP+    EQ SV   +  T    
Sbjct: 140 NT--VSQYQPISQMRPPSIPAGGLAGSSSVNQSITPVTPMQLNGEQSSVTNDLHPTKPNE 197

Query: 362 KVVVKAPSVWIEHTARSGKRYYYNKKTKVSCWEKPFDLMSPIERADASTDWKELTDPDGR 541
           +  +     W EH A +G+RYYYNK+T+ S WEKPF+LM+PIERADASTDWKE   P+GR
Sbjct: 198 ETTMD----WKEHLAANGRRYYYNKRTRQSSWEKPFELMTPIERADASTDWKEFASPEGR 253

Query: 542 KYYYNKLTRQSTWKMP 589
            YYYNK T+QS W++P
Sbjct: 254 TYYYNKTTKQSKWEIP 269


>ref|XP_003545351.1| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Glycine
           max]
          Length = 1002

 Score =  142 bits (357), Expect = 5e-32
 Identities = 86/198 (43%), Positives = 112/198 (56%), Gaps = 2/198 (1%)
 Frame = +2

Query: 2   APQTFSVPDG--QPSRPVLSVSPQAQQAVPRPNNYMPGPSGPRXXXXXXXXXXXXXXXQP 175
           AP + ++P    Q +RP+ S+ P +QQ VP  +N+MPG +                  Q 
Sbjct: 74  APSSQAIPMQYIQTNRPLTSIPPHSQQNVPPLSNHMPGLAVSVAAPHSSYFTLSYGQQQD 133

Query: 176 QIHVNAEAANQYQQTSANMPSFPLGGPAWSSDGQTSKAVTPVLQPAEQISVVPSVPVTMD 355
               NA A  QYQ     M + P G P  SS  Q++ AVT V     Q S   S    ++
Sbjct: 134 ----NANALAQYQHPP-QMFAPPSGQPWPSSASQSAVAVTSVQPAGVQSSGATSTDAVIN 188

Query: 356 APKVVVKAPSVWIEHTARSGKRYYYNKKTKVSCWEKPFDLMSPIERADASTDWKELTDPD 535
           A     ++ S W EHT+  G+RYYYNK+T+ S WEKP +LMSPIERADAST WKE T  +
Sbjct: 189 ATNQ--QSLSDWQEHTSADGRRYYYNKRTRQSSWEKPLELMSPIERADASTVWKEFTSSE 246

Query: 536 GRKYYYNKLTRQSTWKMP 589
           GRKYYYNK+T+QSTW +P
Sbjct: 247 GRKYYYNKVTQQSTWSIP 264


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