BLASTX nr result

ID: Atractylodes22_contig00041831 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041831
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulg...    82   2e-24
ref|XP_002868452.1| predicted protein [Arabidopsis lyrata subsp....    60   8e-09

>ref|NP_064004.1| orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|323435151|ref|YP_004222369.1| hypothetical
           protein BevumaM_p136 [Beta vulgaris subsp. maritima]
           gi|346683242|ref|YP_004842174.1| hypothetical protein
           BemaM_p130 [Beta macrocarpa] gi|9049306|dbj|BAA99316.1|
           orf107b [Beta vulgaris subsp. vulgaris]
           gi|317905601|emb|CBJ14008.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439884|emb|CBJ17584.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148038|emb|CBJ20702.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500160|emb|CBX24979.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977914|emb|CBL54138.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 107

 Score = 82.0 bits (201), Expect(2) = 2e-24
 Identities = 41/45 (91%), Positives = 41/45 (91%)
 Frame = -1

Query: 433 PRYRTCDSHRIRLAQRLLNSSRAFSSTSPLQSSIKLAFPRRYEMG 299
           PRYRTCDSHRIRLAQRLLN SRAFSST PLQSSIKLAF RR EMG
Sbjct: 30  PRYRTCDSHRIRLAQRLLNPSRAFSSTFPLQSSIKLAFSRRSEMG 74



 Score = 55.1 bits (131), Expect(2) = 2e-24
 Identities = 28/35 (80%), Positives = 30/35 (85%)
 Frame = -2

Query: 300 GVFPSPIVCIGLASYRTKEAFWRARACRKADDYIS 196
           GVFPSPIVCIGLAS R+K  + RARACRKAD YIS
Sbjct: 74  GVFPSPIVCIGLASSRSK-LYLRARACRKADHYIS 107


>ref|XP_002868452.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297314288|gb|EFH44711.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 96

 Score = 60.1 bits (144), Expect(2) = 8e-09
 Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 5/52 (9%)
 Frame = +1

Query: 190 LLAYIVVGLPTRTRPPECLLGSV*SQA----DTYDRRRKDPP-FHSAWGTQV 330
           LLAY++VGLPTRTRPPECLL  V  +A      YDRRRKDP  F+SAW + +
Sbjct: 14  LLAYVMVGLPTRTRPPECLLFVVLDEAKPIHTIYDRRRKDPHLFNSAWASLI 65



 Score = 24.6 bits (52), Expect(2) = 8e-09
 Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 3/20 (15%)
 Frame = +3

Query: 324 ASLIEDWRG---EVEEKARD 374
           ASLIEDWRG    VE   RD
Sbjct: 62  ASLIEDWRGYMPAVESLGRD 81


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