BLASTX nr result

ID: Atractylodes22_contig00041245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041245
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320709.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22
ref|XP_002301262.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_002876566.1| CYCP3_2 [Arabidopsis lyrata subsp. lyrata] g...   104   8e-21
ref|XP_002511648.1| Nuc-1 negative regulatory protein preg, puta...   104   8e-21
ref|XP_002275585.1| PREDICTED: cyclin-U2-1 [Vitis vinifera] gi|2...   102   3e-20

>ref|XP_002320709.1| predicted protein [Populus trichocarpa] gi|222861482|gb|EEE99024.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/68 (75%), Positives = 59/68 (86%)
 Frame = +3

Query: 39  NTPLVISVLASLIDRTLARNDRIGRKCAGMSKTGSKTRVFDCHETPDMTIQSYLERIFRY 218
           NTPLVI+VLASLI+RT+ARN+RI + C       ++TRVFDCHETPD+TIQSYLERIFRY
Sbjct: 27  NTPLVIAVLASLIERTMARNERIVKNCTWALSKDTRTRVFDCHETPDLTIQSYLERIFRY 86

Query: 219 TRAGPSVY 242
           TRAGPSVY
Sbjct: 87  TRAGPSVY 94


>ref|XP_002301262.1| predicted protein [Populus trichocarpa] gi|222842988|gb|EEE80535.1|
           predicted protein [Populus trichocarpa]
          Length = 223

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/68 (75%), Positives = 58/68 (85%)
 Frame = +3

Query: 39  NTPLVISVLASLIDRTLARNDRIGRKCAGMSKTGSKTRVFDCHETPDMTIQSYLERIFRY 218
           NTPLVISVLASLI+RT+ARN+RI + C        +TRVFDCHETPD+TIQSYLER+FRY
Sbjct: 27  NTPLVISVLASLIERTMARNERIVKNCTWALSKDIRTRVFDCHETPDLTIQSYLERVFRY 86

Query: 219 TRAGPSVY 242
           TRAGPSVY
Sbjct: 87  TRAGPSVY 94


>ref|XP_002876566.1| CYCP3_2 [Arabidopsis lyrata subsp. lyrata]
           gi|297322404|gb|EFH52825.1| CYCP3_2 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 227

 Score =  104 bits (259), Expect = 8e-21
 Identities = 50/67 (74%), Positives = 56/67 (83%)
 Frame = +3

Query: 42  TPLVISVLASLIDRTLARNDRIGRKCAGMSKTGSKTRVFDCHETPDMTIQSYLERIFRYT 221
           TPLVISVL+SLIDRTL RN+RI R+    S  G KT++FDC E PDMTIQSYLERIFRYT
Sbjct: 29  TPLVISVLSSLIDRTLTRNERISRRALPSSGAGGKTQIFDCREIPDMTIQSYLERIFRYT 88

Query: 222 RAGPSVY 242
           +AGPSVY
Sbjct: 89  KAGPSVY 95


>ref|XP_002511648.1| Nuc-1 negative regulatory protein preg, putative [Ricinus communis]
           gi|223548828|gb|EEF50317.1| Nuc-1 negative regulatory
           protein preg, putative [Ricinus communis]
          Length = 224

 Score =  104 bits (259), Expect = 8e-21
 Identities = 50/66 (75%), Positives = 56/66 (84%)
 Frame = +3

Query: 45  PLVISVLASLIDRTLARNDRIGRKCAGMSKTGSKTRVFDCHETPDMTIQSYLERIFRYTR 224
           PLVISVLASLI+RT+ARN+RI + C+       KTRVFDC+ETPDMTIQSYLERIFRYTR
Sbjct: 29  PLVISVLASLIERTMARNERIAKNCSWALSKDIKTRVFDCYETPDMTIQSYLERIFRYTR 88

Query: 225 AGPSVY 242
            GPSVY
Sbjct: 89  TGPSVY 94


>ref|XP_002275585.1| PREDICTED: cyclin-U2-1 [Vitis vinifera]
           gi|297734540|emb|CBI16591.3| unnamed protein product
           [Vitis vinifera]
          Length = 229

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/68 (75%), Positives = 56/68 (82%)
 Frame = +3

Query: 39  NTPLVISVLASLIDRTLARNDRIGRKCAGMSKTGSKTRVFDCHETPDMTIQSYLERIFRY 218
           NTPLVISVLASLI+RT+ARN+RI +          +T VFDCHETPDMTIQSYLERIFRY
Sbjct: 33  NTPLVISVLASLIERTMARNERIAKNSPRGLSRYLRTGVFDCHETPDMTIQSYLERIFRY 92

Query: 219 TRAGPSVY 242
           TRAGPSVY
Sbjct: 93  TRAGPSVY 100


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