BLASTX nr result

ID: Atractylodes22_contig00041200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00041200
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [...   214   1e-53
ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communi...   196   5e-48
ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|2...   191   2e-46
ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-l...   189   5e-46
ref|XP_002886225.1| transducin family protein [Arabidopsis lyrat...   186   3e-45

>ref|XP_002274240.1| PREDICTED: WD repeat-containing protein 13 [Vitis vinifera]
           gi|297744762|emb|CBI38024.3| unnamed protein product
           [Vitis vinifera]
          Length = 477

 Score =  214 bits (545), Expect = 1e-53
 Identities = 109/181 (60%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
 Frame = -2

Query: 541 MADQTIVKCSSXXXXXXXXXXXXXXXXXDPETFSCMLQPCPADSDPNYIGIRRLLLFRKA 362
           MA++TI K SS                  P  FSC+LQP  ADSDP YIGIRRLLL RKA
Sbjct: 1   MAEETIEKSSSSEEENNKAVD--------PTFFSCLLQPSSADSDPQYIGIRRLLLRRKA 52

Query: 361 QSGVLRRKDWRCNGKGYVAYRNFINRPDNWLNSQIPSRASTPGTSGRWIPSPSQLSIALE 182
           +SGV RRKDWRCNGKGYVAYRN+I RP NW +   PS +STPG SGRWIPSP+ LS+  E
Sbjct: 53  ESGVHRRKDWRCNGKGYVAYRNYIRRPRNWESLHAPSHSSTPGQSGRWIPSPAPLSLLFE 112

Query: 181 VESWVGSKDLHES-QTLSRTVSFGANSSDFEHPRRKAEPAYSFVGMHCIFDECKAMVTVI 5
           V+SW  S+DL    Q  S   SF +++SD + P RK EPAYSFVGMHCIFD+CKA VTV+
Sbjct: 113 VDSWSSSRDLRSGYQASSHRTSFSSSASDNDPPVRKVEPAYSFVGMHCIFDQCKASVTVL 172

Query: 4   K 2
           K
Sbjct: 173 K 173


>ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communis]
           gi|223547972|gb|EEF49464.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 500

 Score =  196 bits (497), Expect = 5e-48
 Identities = 94/153 (61%), Positives = 113/153 (73%), Gaps = 2/153 (1%)
 Frame = -2

Query: 454 PETFSCMLQPCPADSDPNYIGIRRLLLFRKAQSGVLRRKDWRCNGKGYVAYRNFINRPDN 275
           PE FSC+LQP   DSDP YIGIRRLLL+RK+ SGV RR DWRCNGKGYV+YRN+I RP N
Sbjct: 40  PELFSCLLQPVTTDSDPEYIGIRRLLLYRKSDSGVNRRLDWRCNGKGYVSYRNYIRRPRN 99

Query: 274 WLNSQIPSRASTPGTSGRWIPSPS-QLSIALEVESWVGSKDLHESQTLSRTVSFGANSSD 98
           W N QIPS  +TPG SGRW+  PS  LS   + ESW  S++L  +   +   SF ++ SD
Sbjct: 100 WENQQIPSLQTTPGDSGRWLQCPSPPLSHMFDAESWSSSRNLSGNLASTHRTSFSSSVSD 159

Query: 97  FEHPRRK-AEPAYSFVGMHCIFDECKAMVTVIK 2
            + PRR+  EPAYSFVGMHCIFD+CK+ VTV+K
Sbjct: 160 NDRPRRRGVEPAYSFVGMHCIFDQCKSAVTVLK 192


>ref|XP_002306125.1| predicted protein [Populus trichocarpa] gi|222849089|gb|EEE86636.1|
           predicted protein [Populus trichocarpa]
          Length = 508

 Score =  191 bits (484), Expect = 2e-46
 Identities = 94/153 (61%), Positives = 113/153 (73%), Gaps = 2/153 (1%)
 Frame = -2

Query: 454 PETFSCMLQPCPADSDPNYIGIRRLLLFRKAQSGVLRRKDWRCNGKGYVAYRNFINRPDN 275
           PE FSC+LQP  +DSDP+YIGIRRLLL+RKA+SGV RR DWRCNGKGY +YRN+I RP N
Sbjct: 48  PELFSCLLQPVTSDSDPDYIGIRRLLLYRKAESGVRRRLDWRCNGKGYTSYRNYIRRPRN 107

Query: 274 WLNSQIPSRASTPGTSGRWIPSPSQLSIALEVESWVGSKDLHESQTLS-RTVSFGANSSD 98
           W    +PS  STPG SGRW+ S +  S   EV+SW  S+DL  +   S    SF + +SD
Sbjct: 108 W--DGLPSHQSTPGNSGRWLQSTTPPSHLFEVDSWTSSRDLRSTNLPSTHRTSFSSTASD 165

Query: 97  FEHPRRK-AEPAYSFVGMHCIFDECKAMVTVIK 2
            +  RR+ AEPAYSFVGMHCIFD+CKA VTV+K
Sbjct: 166 NDSLRRRGAEPAYSFVGMHCIFDQCKAAVTVLK 198


>ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-like [Cucumis sativus]
           gi|449519860|ref|XP_004166952.1| PREDICTED: WD
           repeat-containing protein 13-like [Cucumis sativus]
          Length = 490

 Score =  189 bits (480), Expect = 5e-46
 Identities = 92/152 (60%), Positives = 111/152 (73%), Gaps = 1/152 (0%)
 Frame = -2

Query: 454 PETFSCMLQPCPADSDPNYIGIRRLLLFRKAQSGVLRRKDWRCNGKGYVAYRNFINRPDN 275
           PE  SC+LQP     DP+YIGIRRLLL+RKA++ + RRKDWRCNGKGYVA+RNFI RP N
Sbjct: 39  PELLSCLLQPMSIGVDPDYIGIRRLLLYRKAEAAIFRRKDWRCNGKGYVAFRNFIRRPRN 98

Query: 274 WLNSQIPSRASTPGTSGRWIPSPSQLSIALEVESWVGSKDLHESQTLSRTVSFGANSSD- 98
           W +S++PS  STPG SGRW+P  S LS+  EVESW  SKDL       R  SF +++SD 
Sbjct: 99  WESSRLPSLQSTPGNSGRWVPPQSPLSLLHEVESWTSSKDLQS----HRRSSFSSSASDN 154

Query: 97  FEHPRRKAEPAYSFVGMHCIFDECKAMVTVIK 2
            +   R+ E AYSFVGMHCIFD+CKA V V+K
Sbjct: 155 SQLQTRRVEFAYSFVGMHCIFDQCKAAVMVVK 186


>ref|XP_002886225.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332065|gb|EFH62484.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 482

 Score =  186 bits (473), Expect = 3e-45
 Identities = 93/155 (60%), Positives = 114/155 (73%), Gaps = 4/155 (2%)
 Frame = -2

Query: 454 PETFSCMLQPCPADSDPNYIGIRRLLLFRKAQSGVL-RRKDWRCNGKGYVAYRNFINRPD 278
           PE  SCM+QP  A+SDP YIGIRR+LL RKA+SGV+ RR DWRCNGKGYVAYRNFI++P 
Sbjct: 25  PEFISCMMQPATAESDPQYIGIRRILLHRKAESGVISRRYDWRCNGKGYVAYRNFISKPR 84

Query: 277 NWLNSQIPSRASTPGTSGRWIPSPSQLSIALEVESWVGSKDLHE-SQTLSRTVSFGANSS 101
            W N + PS  S+PG SGRW+PSPS LS   E ES+  S+DL   +Q  S   SF ++ S
Sbjct: 85  KWENLRTPSLLSSPGNSGRWLPSPSPLSHQFEAESFTSSRDLRSVNQVSSHRASFSSSLS 144

Query: 100 DFEHPRRK--AEPAYSFVGMHCIFDECKAMVTVIK 2
           D ++  R+   E AYSFVGMHCIFD+CK+ VTV+K
Sbjct: 145 DGDNSYRRGGVEHAYSFVGMHCIFDQCKSSVTVLK 179


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