BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040418
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s...   259   2e-67
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s...   258   8e-67
ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polype...   236   2e-60
ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp....   217   1e-54
ref|NP_973776.1| RNA polymerase Rpb7 N-terminal domain-containin...   216   2e-54

>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
           vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  259 bits (663), Expect = 2e-67
 Identities = 124/177 (70%), Positives = 151/177 (85%), Gaps = 1/177 (0%)
 Frame = -1

Query: 528 MFNLSKLEHTLRLQPHLLSLPINEAVKGELEGLFLDKVIANLGLCISVYDIESIDGGFIF 349
           MF LS +EHTLRL PHLL LP+NEA+KGELE LFLDKV+ANLGLCISVYDI SIDGGF+F
Sbjct: 1   MFFLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVLANLGLCISVYDIRSIDGGFVF 60

Query: 348 PNEGAPTYTVKFRLIIFRPFIGEVISARLIESNADGLRLSLGFFDDIYIPALLMPDSSYA 169
           P +GA TYTV+FRL++FRPF+GE+I+A+L ES+A+GL+LSLGFFDDIYIP  LMP+  + 
Sbjct: 61  PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLQLSLGFFDDIYIPVHLMPNPCHC 120

Query: 168 EPDEENKNQVKWIWKPDDEEYLIDGYDEIRFRVQNIKFPEIPKEQ-KESKPFAPMEI 1
           EPD ENK+QV WIW   ++++ IDG DEIRF+VQ++ +P IP EQ KESKPFAPM I
Sbjct: 121 EPDPENKSQVIWIWDYQEQKFPIDGLDEIRFQVQSVSYPPIPVEQPKESKPFAPMMI 177


>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  258 bits (658), Expect = 8e-67
 Identities = 124/177 (70%), Positives = 149/177 (84%), Gaps = 1/177 (0%)
 Frame = -1

Query: 528 MFNLSKLEHTLRLQPHLLSLPINEAVKGELEGLFLDKVIANLGLCISVYDIESIDGGFIF 349
           MF LS +EHTLRL PHLL LP+NEA+KGELE LFLDKVIANLGLCISVYDI SIDGGF+F
Sbjct: 1   MFYLSLIEHTLRLPPHLLDLPLNEAIKGELESLFLDKVIANLGLCISVYDIRSIDGGFVF 60

Query: 348 PNEGAPTYTVKFRLIIFRPFIGEVISARLIESNADGLRLSLGFFDDIYIPALLMPDSSYA 169
           P +GA TYTV+FRL++FRPF+GE+I+A+L ES+A+GLRLSLGFFDDIYIP  LMP+  + 
Sbjct: 61  PGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLRLSLGFFDDIYIPVHLMPNPCHC 120

Query: 168 EPDEENKNQVKWIWKPDDEEYLIDGYDEIRFRVQNIKFPEIPKEQ-KESKPFAPMEI 1
           EP+ E K QV WIW   ++++ IDG DEIRF+VQ++ +P IP EQ KESKPFAPM I
Sbjct: 121 EPNPEKKGQVIWIWDYQEQKFPIDGIDEIRFQVQSVSYPPIPVEQPKESKPFAPMVI 177


>ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polypeptide, putative
           [Ricinus communis] gi|223539824|gb|EEF41404.1|
           DNA-directed RNA polymerase III 25 kD polypeptide,
           putative [Ricinus communis]
          Length = 194

 Score =  236 bits (602), Expect = 2e-60
 Identities = 117/180 (65%), Positives = 144/180 (80%), Gaps = 4/180 (2%)
 Frame = -1

Query: 528 MFNLSKLEHTLRLQPHLLSLPINEAVKGELEGLFLDKVIANLGLCISVYDIESIDGGFIF 349
           MF LS++EHTLRL P LLSLP+ +AVK ELE +FLDKVIANLGLCISVYD+  IDGGFIF
Sbjct: 1   MFYLSEIEHTLRLPPSLLSLPLQDAVKKELEIIFLDKVIANLGLCISVYDVTHIDGGFIF 60

Query: 348 PNEGAPTYTVKFRLIIFRPFIGEVISARLIESNADGLRLSLGFFDDIYIPALLMPDSSYA 169
           P +GA TYTV+FR+++FRPF+GE+I A+L ESN DGLRLSLGFFDDIYIP+  +P  SY+
Sbjct: 61  PGDGASTYTVRFRIVVFRPFVGEIIVAKLKESNNDGLRLSLGFFDDIYIPSHRLPKPSYS 120

Query: 168 EPDEENKNQVKWIWKPDDE----EYLIDGYDEIRFRVQNIKFPEIPKEQKESKPFAPMEI 1
           + D EN+ Q  WIW+   E    E+ IDG DEI+FRV ++K+P +P EQ+E KPFAPM I
Sbjct: 121 QQDPENRYQAIWIWEFVSEDNKMEFNIDGLDEIKFRVDSVKYPPVPLEQQE-KPFAPMVI 179


>ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335460|gb|EFH65877.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 204

 Score =  217 bits (553), Expect = 1e-54
 Identities = 99/179 (55%), Positives = 144/179 (80%), Gaps = 3/179 (1%)
 Frame = -1

Query: 528 MFNLSKLEHTLRLQPHLLSLPINEAVKGELEGLFLDKVIANLGLCISVYDIESIDGGFIF 349
           MF LS+LEH+LR+ PHLL+LP+ +A+K  L+ +FLDKV+A+LGLC+SVYDI+SI+GGF+ 
Sbjct: 1   MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSVYDIKSIEGGFVL 60

Query: 348 PNEGAPTYTVKFRLIIFRPFIGEVISARLIESNADGLRLSLGFFDDIYIPALLMPDSSYA 169
           P +GA TY V FR+++FRPF+GEVI+A+  ES+++GLRL+LGFFDDIY+PA LMP  +  
Sbjct: 61  PGDGAATYKVGFRIVVFRPFVGEVIAAKFKESDSNGLRLTLGFFDDIYVPAPLMPKPNRC 120

Query: 168 EPDEENKNQVKWIWKPDD--EEYLIDGYDEIRFRVQNIKFPEIPKEQKE-SKPFAPMEI 1
           EPD  N+ Q+ W+W+  +  E+++ID   +I+FRV++I +P +P E+ E +KPFAPM +
Sbjct: 121 EPDPYNRKQMIWVWEYGEPLEDFIIDDSCQIKFRVESISYPSVPTERAEDAKPFAPMVV 179


>ref|NP_973776.1| RNA polymerase Rpb7 N-terminal domain-containing protein
           [Arabidopsis thaliana] gi|332189916|gb|AEE28037.1| RNA
           polymerase Rpb7 N-terminal domain-containing protein
           [Arabidopsis thaliana]
          Length = 189

 Score =  216 bits (551), Expect = 2e-54
 Identities = 97/179 (54%), Positives = 143/179 (79%), Gaps = 3/179 (1%)
 Frame = -1

Query: 528 MFNLSKLEHTLRLQPHLLSLPINEAVKGELEGLFLDKVIANLGLCISVYDIESIDGGFIF 349
           MF LS+LEH+LR+ PHLL+LP+ +A+K  L+ +FLDKV+A+LGLC+S+YDI+S++GGF+ 
Sbjct: 1   MFYLSELEHSLRVPPHLLNLPLEDAIKSVLQNVFLDKVLADLGLCVSIYDIKSVEGGFVL 60

Query: 348 PNEGAPTYTVKFRLIIFRPFIGEVISARLIESNADGLRLSLGFFDDIYIPALLMPDSSYA 169
           P +GA TY V  R+++FRPF+GEVI+A+  ES+A+GLRL+LGFFDDIY+PA LMP  +  
Sbjct: 61  PGDGAATYKVGLRIVVFRPFVGEVIAAKFKESDANGLRLTLGFFDDIYVPAPLMPKPNRC 120

Query: 168 EPDEENKNQVKWIWKPDD--EEYLIDGYDEIRFRVQNIKFPEIPKEQKE-SKPFAPMEI 1
           EPD  N+ Q+ W+W+  +  E+Y++D   +I+FRV++I +P +P E+ E +KPFAPM +
Sbjct: 121 EPDPYNRKQMIWVWEYGEPKEDYIVDDACQIKFRVESISYPSVPTERAEDAKPFAPMVV 179