BLASTX nr result

ID: Atractylodes22_contig00040298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040298
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300803.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002520982.1| F-box/leucine rich repeat protein, putative ...    61   1e-07
ref|XP_002307626.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_004172007.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    59   5e-07
ref|XP_004146955.1| PREDICTED: F-box/LRR-repeat protein 17-like ...    59   5e-07

>ref|XP_002300803.1| predicted protein [Populus trichocarpa] gi|222842529|gb|EEE80076.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 32/47 (68%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
 Frame = -2

Query: 223 TPGGAT-SLSDAFLAKRGKR-RGNYNCGRCGLPKKGHVCHLPPPSIT 89
           TPGG+T S +   +  R K+ RGNYNCGRCGLPKKGHVCHLPP S T
Sbjct: 13  TPGGSTASFTSLDIPHRVKKNRGNYNCGRCGLPKKGHVCHLPPTSTT 59


>ref|XP_002520982.1| F-box/leucine rich repeat protein, putative [Ricinus communis]
           gi|223539819|gb|EEF41399.1| F-box/leucine rich repeat
           protein, putative [Ricinus communis]
          Length = 586

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/52 (61%), Positives = 35/52 (67%), Gaps = 5/52 (9%)
 Frame = -2

Query: 223 TPGGAT----SLSDAFLAKRGKR-RGNYNCGRCGLPKKGHVCHLPPPSITDS 83
           TPGG+T    S S  F  K  K+ RG+YNCGRCGLPKKGH CHLPP   T S
Sbjct: 13  TPGGSTASISSSSFDFNNKPPKKQRGSYNCGRCGLPKKGHTCHLPPHPATAS 64


>ref|XP_002307626.1| predicted protein [Populus trichocarpa] gi|222857075|gb|EEE94622.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/49 (59%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
 Frame = -2

Query: 223 TPGGA----TSLSDAFLAKRGKRRGNYNCGRCGLPKKGHVCHLPPPSIT 89
           TP G+    TS+     AK  K RG+YNCGRCG+PKKGHVCHLPP + T
Sbjct: 13  TPSGSIASFTSMDTPHRAK--KHRGSYNCGRCGVPKKGHVCHLPPSTTT 59


>ref|XP_004172007.1| PREDICTED: F-box/LRR-repeat protein 17-like [Cucumis sativus]
          Length = 587

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -2

Query: 181 KRGKRRGNYNCGRCGLPKKGHVCHLPPPSIT 89
           KRGK+RG+YNCGRCGLPKKGHVC+L   S T
Sbjct: 20  KRGKKRGSYNCGRCGLPKKGHVCNLNSSSTT 50


>ref|XP_004146955.1| PREDICTED: F-box/LRR-repeat protein 17-like [Cucumis sativus]
          Length = 587

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -2

Query: 181 KRGKRRGNYNCGRCGLPKKGHVCHLPPPSIT 89
           KRGK+RG+YNCGRCGLPKKGHVC+L   S T
Sbjct: 20  KRGKKRGSYNCGRCGLPKKGHVCNLNSSSTT 50


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