BLASTX nr result

ID: Atractylodes22_contig00040259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00040259
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...    73   2e-11
ref|XP_002322000.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine...    68   7e-10
ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine...    66   3e-09

>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 51/135 (37%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
 Frame = +3

Query: 12  MSDHIPYEIQVQIIKRLPVKSLIRFRSVSKAWKALIDSSDFIGDYSLRHAHQPQRHLVRY 191
           MSDH+P E+  +I+ RLPV+SL+RFRS SK+WK+LIDS            H    HL R 
Sbjct: 1   MSDHLPREVLTEILSRLPVRSLLRFRSTSKSWKSLIDSQ-----------HLNWLHLTRS 49

Query: 192 LDQAHVAKYVSFVD----DKNFPQQNYAPTVPL---LVRQLKFLKIVGSSRGLLCLYGWY 350
           L        +  VD      NFP  +  P V L   L+     + ++GS  GLLC+    
Sbjct: 50  LTLTSNTSLILRVDSDLYQTNFPTLD--PPVSLNHPLMCYSNSITLLGSCNGLLCISNVA 107

Query: 351 YDIEMTVLWNPSIQR 395
            DI     WNPS+++
Sbjct: 108 DDI---AFWNPSLRQ 119


>ref|XP_002322000.1| predicted protein [Populus trichocarpa] gi|222868996|gb|EEF06127.1|
           predicted protein [Populus trichocarpa]
          Length = 392

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 49/122 (40%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
 Frame = +3

Query: 24  IPYEIQVQIIKRLPVKSLIRFRSVSKAWKALIDSSDFIGDYSLRHAHQPQRHLVRYLDQA 203
           +P E    I+ RLP+KSL RF SVSK + ALI+S DFI      H H+  RH   ++   
Sbjct: 14  LPQETLTDILSRLPIKSLTRFESVSKPFSALINSPDFIS----AHLHRSSRHFTFFIRHF 69

Query: 204 HVAKYVSFVDDKNFPQQNYAP---TVPLLVRQLKFLKIVGSSRGLLCLYGWYYDIEMTVL 374
           H     +F    +F   N  P    +PLL   ++F KIVGSS GL+CL          VL
Sbjct: 70  HNPSGSNF----SFSLTNNQPIDVEIPLLGSLIRFPKIVGSSNGLVCLDISSCYARGFVL 125

Query: 375 WN 380
           WN
Sbjct: 126 WN 127


>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 392

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 50/135 (37%), Positives = 69/135 (51%), Gaps = 7/135 (5%)
 Frame = +3

Query: 12  MSDHIPYEIQVQIIKRLPVKSLIRFRSVSKAWKALIDSSDFIGDYSLRHAHQPQRHLVRY 191
           MSDH+P E+   I+ RLP KSL+RFRS SK+WK+LIDS            H    HL R 
Sbjct: 1   MSDHLPREVVTDILSRLPAKSLLRFRSTSKSWKSLIDSQ-----------HFNSVHLSRS 49

Query: 192 LDQAHVAKYVSFVDDKNFPQQNYAPTV--PL-----LVRQLKFLKIVGSSRGLLCLYGWY 350
           L        +  +D   + Q N+ PT+  PL     L+     + ++GS  GLLC+    
Sbjct: 50  LSLTSNTTLILRLDSDLY-QTNF-PTLDPPLFLNHPLMCYSNNITLLGSCNGLLCISNVA 107

Query: 351 YDIEMTVLWNPSIQR 395
            DI     WNPS+++
Sbjct: 108 DDI---AFWNPSLRQ 119


>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
 Frame = +3

Query: 24  IPYEIQVQIIKRLPVKSLIRFRSVSKAWKALIDSSDFIGDYSLRHAHQPQRHLVRYLDQA 203
           +P EI  +I+ RLPVK L+RF+ VSK W++LI   +F+           + HL R  +  
Sbjct: 8   LPSEIISEILSRLPVKCLVRFKCVSKTWRSLISHPEFV-----------KNHLKRTKEDT 56

Query: 204 HVAKYVSFVDDKNF----PQQNYAPTVPLLVRQLKF---------LKIVGSSRGLLCLYG 344
           +   Y  F+         P+  +     LL  QLKF         ++I+GS  GL+C  G
Sbjct: 57  NANHYKIFLSTDPHLSIDPEAYFDADDNLLTTQLKFPVSYPEYSYIEILGSCNGLVC--G 114

Query: 345 WYYDIEMTVLWNPSIQRSVGIVVP 416
             +D  +  +WNPS + S  + +P
Sbjct: 115 LIHDNPLIYIWNPSTRESRELAIP 138


>ref|XP_003529663.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 385

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/128 (33%), Positives = 69/128 (53%)
 Frame = +3

Query: 12  MSDHIPYEIQVQIIKRLPVKSLIRFRSVSKAWKALIDSSDFIGDYSLRHAHQPQRHLVRY 191
           M  ++P E+  +I+ RLPVKS+IR RS  K W+++IDS  F+    L H ++    L+  
Sbjct: 1   MMANLPVEVVTEILSRLPVKSVIRLRSTCKWWRSIIDSRHFV----LFHLNKSHSSLI-L 55

Query: 192 LDQAHVAKYVSFVDDKNFPQQNYAPTVPLLVRQLKFLKIVGSSRGLLCLYGWYYDIEMTV 371
             ++H+     +  D   P+QN       L+     +K++GSS GLLC+     DI    
Sbjct: 56  RHRSHL-----YSLDLKSPEQNPVELSHPLMCYSNSIKVLGSSNGLLCISNVADDI---A 107

Query: 372 LWNPSIQR 395
           LWNP +++
Sbjct: 108 LWNPFLRK 115


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