BLASTX nr result
ID: Atractylodes22_contig00040249
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00040249
(503 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ... 172 2e-54
gb|AEV42261.1| hypothetical protein [Beta vulgaris] 172 1e-53
gb|AAO23078.1| polyprotein [Glycine max] 148 2e-47
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera] 146 1e-46
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [... 154 1e-46
>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
Length = 1631
Score = 172 bits (435), Expect(2) = 2e-54
Identities = 84/122 (68%), Positives = 98/122 (80%), Gaps = 1/122 (0%)
Frame = +1
Query: 7 EVFRPYLRKFVLVFFDDILVYSRDEQQHLEHLTVVLERLAEQQLYANASKCVFGKNEVGY 186
EVFRP+LR+FVLVF DDIL+YSR +++H+ HL +VL LA+ L+ N KC FGK EV Y
Sbjct: 830 EVFRPFLRRFVLVFLDDILIYSRSDEEHVGHLEMVLGMLAQHALFVNKKKCEFGKREVAY 889
Query: 187 LGHIIRAGRVAMDQEKVRAVVEWPVPTNLRELRGFLGLTGYYRKFVAGYATIAAPLTD-L 363
LGH+I G VAMD EKV+AV+EW VP NLRELRGFLGLTGYYRKFVA YA IA PLT+ L
Sbjct: 890 LGHVISEGGVAMDTEKVKAVLEWEVPKNLRELRGFLGLTGYYRKFVANYAHIARPLTEQL 949
Query: 364 KK 369
KK
Sbjct: 950 KK 951
Score = 65.9 bits (159), Expect(2) = 2e-54
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = +3
Query: 360 LKKDQFGWNQMADQAFQQLKKAMTRAPVLSMPDFNRLFIVETNASGYG 503
LKKD F W+ A +AF+QLK AM APVL+MP+F F+VET+ASGYG
Sbjct: 949 LKKDNFKWSATATEAFKQLKSAMVSAPVLAMPNFQLTFVVETDASGYG 996
>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
Length = 1396
Score = 172 bits (436), Expect(2) = 1e-53
Identities = 87/122 (71%), Positives = 96/122 (78%), Gaps = 1/122 (0%)
Frame = +1
Query: 7 EVFRPYLRKFVLVFFDDILVYSRDEQQHLEHLTVVLERLAEQQLYANASKCVFGKNEVGY 186
+VFRPYLRKFVLVFFDDILVYS QH+EHL VLE LA+ +L+AN KC FGK EV Y
Sbjct: 598 DVFRPYLRKFVLVFFDDILVYSMGMTQHVEHLKKVLEVLAQNELFANKKKCEFGKQEVAY 657
Query: 187 LGHIIRAGRVAMDQEKVRAVVEWPVPTNLRELRGFLGLTGYYRKFVAGYATIAAPLT-DL 363
LGHII A VAMD K A++EWP P LRELRGFLGLTGYYR+FV GYATIA+PLT L
Sbjct: 658 LGHIISARGVAMDNSKASAMLEWPQPQTLRELRGFLGLTGYYRRFVKGYATIASPLTQQL 717
Query: 364 KK 369
KK
Sbjct: 718 KK 719
Score = 62.4 bits (150), Expect(2) = 1e-53
Identities = 28/48 (58%), Positives = 37/48 (77%)
Frame = +3
Query: 360 LKKDQFGWNQMADQAFQQLKKAMTRAPVLSMPDFNRLFIVETNASGYG 503
LKKD F W++ A AFQ LK+A+T APVL++P+F F++E NASGYG
Sbjct: 717 LKKDAFQWSKEATTAFQLLKEALTTAPVLALPNFELPFVIEANASGYG 764
>gb|AAO23078.1| polyprotein [Glycine max]
Length = 1552
Score = 148 bits (374), Expect(2) = 2e-47
Identities = 70/124 (56%), Positives = 91/124 (73%)
Frame = +1
Query: 7 EVFRPYLRKFVLVFFDDILVYSRDEQQHLEHLTVVLERLAEQQLYANASKCVFGKNEVGY 186
++F+ LRKFVLVFFDDIL+YS + HL+HL VL+ L + QL+A SKC FG EV Y
Sbjct: 736 KIFQFALRKFVLVFFDDILIYSASWKDHLKHLESVLQTLKQHQLFARLSKCSFGDTEVDY 795
Query: 187 LGHIIRAGRVAMDQEKVRAVVEWPVPTNLRELRGFLGLTGYYRKFVAGYATIAAPLTDLK 366
LGH + V+M+ KV+AV++WP P N+++LRGFLGLTGYYR+F+ YA IA PLTDL
Sbjct: 796 LGHKVSGLGVSMENTKVQAVLDWPTPNNVKQLRGFLGLTGYYRRFIKSYANIAGPLTDLL 855
Query: 367 KTSS 378
+ S
Sbjct: 856 QKDS 859
Score = 65.9 bits (159), Expect(2) = 2e-47
Identities = 31/48 (64%), Positives = 39/48 (81%)
Frame = +3
Query: 360 LKKDQFGWNQMADQAFQQLKKAMTRAPVLSMPDFNRLFIVETNASGYG 503
L+KD F WN A+ AF +LKKAMT APVLS+PDF++ FI+ET+ASG G
Sbjct: 855 LQKDSFLWNNEAEAAFVKLKKAMTEAPVLSLPDFSQPFILETDASGIG 902
>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
Length = 2232
Score = 146 bits (368), Expect(2) = 1e-46
Identities = 71/121 (58%), Positives = 90/121 (74%), Gaps = 1/121 (0%)
Frame = +1
Query: 10 VFRPYLRKFVLVFFDDILVYSRDEQQHLEHLTVVLERLAEQQLYANASKCVFGKNEVGYL 189
+F P+L KFVLVFF DILVYS+D ++H +HL VL LA QL+ N KC+F K ++ YL
Sbjct: 1379 IFWPHLWKFVLVFFYDILVYSKDLKEHCDHLQTVLSILANHQLHVNGKKCLFAKLQLEYL 1438
Query: 190 GHIIRAGRVAMDQEKVRAVVEWPVPTNLRELRGFLGLTGYYRKFVAGYATIAAPLT-DLK 366
GH++ A VA D K+ A+VEWP P +L+ELRGFLGLTGYYR+FV GY I+ PLT +LK
Sbjct: 1439 GHLVSAKGVAADPNKISAMVEWPTPKSLKELRGFLGLTGYYRRFVEGYGAISWPLTQELK 1498
Query: 367 K 369
K
Sbjct: 1499 K 1499
Score = 65.5 bits (158), Expect(2) = 1e-46
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = +3
Query: 360 LKKDQFGWNQMADQAFQQLKKAMTRAPVLSMPDFNRLFIVETNASGYG 503
LKKD F WN A+ AFQ+LK MT PVL++P+F++LFIVE +ASGYG
Sbjct: 1497 LKKDAFNWNLEAEVAFQKLKTTMTTIPVLALPNFSQLFIVEMDASGYG 1544
>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1661
Score = 154 bits (388), Expect(2) = 1e-46
Identities = 76/124 (61%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
Frame = +1
Query: 7 EVFRPYLRKFVLVFFDDILVYSRDEQQHLEHLTVVLERLAEQQLYANASKCVFGKNEVGY 186
++FRPYLRKFVLVFFDDILVYS D + HL+HL VL+ L Q YAN KC FG + Y
Sbjct: 854 DLFRPYLRKFVLVFFDDILVYSPDMKTHLKHLETVLQLLHLHQFYANFKKCTFGSTRISY 913
Query: 187 LGHIIRAGRVAMDQEKVRAVVEWPVPTNLRELRGFLGLTGYYRKFVAGYATIAAPLTD-L 363
LGHII VA D EKV A+++WP+P ++ ELRGFLG TGYYR+FV Y IA PL D L
Sbjct: 914 LGHIISEQGVATDPEKVEAMLQWPLPKSVTELRGFLGFTGYYRRFVKNYGQIARPLRDQL 973
Query: 364 KKTS 375
KK S
Sbjct: 974 KKNS 977
Score = 57.8 bits (138), Expect(2) = 1e-46
Identities = 27/48 (56%), Positives = 34/48 (70%)
Frame = +3
Query: 360 LKKDQFGWNQMADQAFQQLKKAMTRAPVLSMPDFNRLFIVETNASGYG 503
LKK+ F WN+ A AFQ LK A++ PVL +PDF + F VET+ASG G
Sbjct: 973 LKKNSFDWNEAATSAFQALKAAVSALPVLVLPDFQQEFTVETDASGMG 1020