BLASTX nr result
ID: Atractylodes22_contig00039093
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes22_contig00039093
(571 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containi... 298 3e-79
ref|XP_002512769.1| pentatricopeptide repeat-containing protein,... 265 3e-69
ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containi... 262 3e-68
ref|XP_003623854.1| Pentatricopeptide repeat-containing protein ... 253 1e-65
gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula] 253 1e-65
>ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera] gi|297736133|emb|CBI24171.3| unnamed
protein product [Vitis vinifera]
Length = 687
Score = 298 bits (764), Expect = 3e-79
Identities = 141/190 (74%), Positives = 162/190 (85%)
Frame = -2
Query: 570 NYATWNAVLCGCLQTGRTQQVFGLLSEMQDAGFNPNQITLTAVLTACTNLECLRGGKEIH 391
NYA+WNAV+ GC+Q GRT++ +LS MQ++GF PNQIT+T+VL ACTNLE LRGGK+IH
Sbjct: 279 NYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIH 338
Query: 390 GYIFRHCFVDDTTALTALIFMYAKCGKLEFSRKAFEMMPRRDTVAWNTMIIANSMHGNGE 211
GYIFRH F D T TAL+FMYAKCG LE SR+ F MM +RDTV+WNTMIIA SMHGNGE
Sbjct: 339 GYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKRDTVSWNTMIIATSMHGNGE 398
Query: 210 EALLLFSEMLKSGAKPNAVTFTGVLSGCSHSRLVDEGLSIFYSMSRVHLIEPDAEHHSCI 31
EALLLF EM+ SG +PN+VTFTGVLSGCSHSRLVDEGL IF SMSR H +EPDA+HHSC+
Sbjct: 399 EALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCM 458
Query: 30 VDVLSRAGRL 1
VDVLSRAGRL
Sbjct: 459 VDVLSRAGRL 468
Score = 100 bits (250), Expect = 1e-19
Identities = 47/161 (29%), Positives = 88/161 (54%)
Frame = -2
Query: 561 TWNAVLCGCLQTGRTQQVFGLLSEMQDAGFNPNQITLTAVLTACTNLECLRGGKEIHGYI 382
+W ++ + G ++ G +M G PN +T++++L ACT+L+ L+ G+E+HG++
Sbjct: 146 SWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREVHGFV 205
Query: 381 FRHCFVDDTTALTALIFMYAKCGKLEFSRKAFEMMPRRDTVAWNTMIIANSMHGNGEEAL 202
R+ + +AL+ MYA C + ++ F+ M RRDTV+WN +I A ++ E+ L
Sbjct: 206 VRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGL 265
Query: 201 LLFSEMLKSGAKPNAVTFTGVLSGCSHSRLVDEGLSIFYSM 79
+F M+ G N ++ V+ GC + ++ L + M
Sbjct: 266 SVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRM 306
Score = 77.8 bits (190), Expect = 1e-12
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 1/158 (0%)
Frame = -2
Query: 561 TWNAVLCGCLQTGRTQQVFGLLSEMQDAG-FNPNQITLTAVLTACTNLECLRGGKEIHGY 385
TW ++ + GR+ + ++ + P+++ L +V AC +L + K +H
Sbjct: 44 TWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHED 103
Query: 384 IFRHCFVDDTTALTALIFMYAKCGKLEFSRKAFEMMPRRDTVAWNTMIIANSMHGNGEEA 205
R F D ALI MY KC E +R FE MP RD ++W +M G EA
Sbjct: 104 AIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEGMPFRDVISWTSMASCYVNCGLLREA 163
Query: 204 LLLFSEMLKSGAKPNAVTFTGVLSGCSHSRLVDEGLSI 91
L F +M +G +PN+VT + +L C+ + + G +
Sbjct: 164 LGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGREV 201
>ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547780|gb|EEF49272.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 684
Score = 265 bits (678), Expect = 3e-69
Identities = 121/190 (63%), Positives = 150/190 (78%)
Frame = -2
Query: 570 NYATWNAVLCGCLQTGRTQQVFGLLSEMQDAGFNPNQITLTAVLTACTNLECLRGGKEIH 391
N A+WNA + GC+Q G+ + G+L +MQD+G PN+IT+ + L CTNLE LRGGKEIH
Sbjct: 276 NQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIH 335
Query: 390 GYIFRHCFVDDTTALTALIFMYAKCGKLEFSRKAFEMMPRRDTVAWNTMIIANSMHGNGE 211
GY+FRH F++D T TAL+ +YAKCG LE SR F MPR+D VAWNTMI+ANSMHG G
Sbjct: 336 GYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGG 395
Query: 210 EALLLFSEMLKSGAKPNAVTFTGVLSGCSHSRLVDEGLSIFYSMSRVHLIEPDAEHHSCI 31
E+L+LF++ML SG +PN+VTF GVLSGCSHS+L DEGL +F SMS H I PDA+H+SC+
Sbjct: 396 ESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCM 455
Query: 30 VDVLSRAGRL 1
VDVLSRAGRL
Sbjct: 456 VDVLSRAGRL 465
Score = 83.6 bits (205), Expect = 2e-14
Identities = 49/161 (30%), Positives = 82/161 (50%)
Frame = -2
Query: 561 TWNAVLCGCLQTGRTQQVFGLLSEMQDAGFNPNQITLTAVLTACTNLECLRGGKEIHGYI 382
+W ++ + G +Q L EM G N +T++++L AC + ++ G+E+HG+I
Sbjct: 145 SWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADY--IKLGREVHGFI 202
Query: 381 FRHCFVDDTTALTALIFMYAKCGKLEFSRKAFEMMPRRDTVAWNTMIIANSMHGNGEEAL 202
R+ + +AL+ MYA L+ +R F+ M RD V+WN M+ A ++ E L
Sbjct: 203 LRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGL 262
Query: 201 LLFSEMLKSGAKPNAVTFTGVLSGCSHSRLVDEGLSIFYSM 79
LF +M K G K N ++ +SGC + + L I M
Sbjct: 263 GLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKM 303
Score = 68.2 bits (165), Expect = 9e-10
Identities = 41/146 (28%), Positives = 68/146 (46%)
Frame = -2
Query: 561 TWNAVLCGCLQTGRTQQVFGLLSEMQDAGFNPNQITLTAVLTACTNLECLRGGKEIHGYI 382
TW ++ G Q G ++ + S + P++ L +V AC L K+IH
Sbjct: 44 TWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDA 103
Query: 381 FRHCFVDDTTALTALIFMYAKCGKLEFSRKAFEMMPRRDTVAWNTMIIANSMHGNGEEAL 202
+ F D ALI M+ KC + +R F+ M +D V+W +M G + +
Sbjct: 104 IQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGI 163
Query: 201 LLFSEMLKSGAKPNAVTFTGVLSGCS 124
LLF EM +G + N++T + +L C+
Sbjct: 164 LLFREMGLNGIRANSLTVSSILPACA 189
>ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 741
Score = 262 bits (670), Expect = 3e-68
Identities = 121/188 (64%), Positives = 151/188 (80%)
Frame = -2
Query: 564 ATWNAVLCGCLQTGRTQQVFGLLSEMQDAGFNPNQITLTAVLTACTNLECLRGGKEIHGY 385
ATWNAV+ GC++ G+T++ +L +MQ+ GF PNQIT+++ L AC+ LE LR GKE+H Y
Sbjct: 335 ATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKEVHCY 394
Query: 384 IFRHCFVDDTTALTALIFMYAKCGKLEFSRKAFEMMPRRDTVAWNTMIIANSMHGNGEEA 205
+FRH + D T +TAL++MYAKCG L SR F+M+ R+D VAWNTMIIAN+MHGNG E
Sbjct: 395 VFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVVAWNTMIIANAMHGNGREV 454
Query: 204 LLLFSEMLKSGAKPNAVTFTGVLSGCSHSRLVDEGLSIFYSMSRVHLIEPDAEHHSCIVD 25
LLLF ML+SG KPN+VTFTGVLSGCSHSRLV+EGL IF SM R HL+EPDA H++C+VD
Sbjct: 455 LLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSMGRDHLVEPDANHYACMVD 514
Query: 24 VLSRAGRL 1
V SRAGRL
Sbjct: 515 VFSRAGRL 522
Score = 101 bits (252), Expect = 8e-20
Identities = 46/164 (28%), Positives = 90/164 (54%)
Frame = -2
Query: 561 TWNAVLCGCLQTGRTQQVFGLLSEMQDAGFNPNQITLTAVLTACTNLECLRGGKEIHGYI 382
+W ++ + G + + EM G PN +TL+++L AC+ L+ L+ G+ IHG+
Sbjct: 200 SWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFA 259
Query: 381 FRHCFVDDTTALTALIFMYAKCGKLEFSRKAFEMMPRRDTVAWNTMIIANSMHGNGEEAL 202
RH +++ +AL+ +YA+C ++ +R F++MP RD V+WN ++ A + ++ L
Sbjct: 260 VRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGL 319
Query: 201 LLFSEMLKSGAKPNAVTFTGVLSGCSHSRLVDEGLSIFYSMSRV 70
LFS+M G + + T+ V+ GC + ++ + + M +
Sbjct: 320 ALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNL 363
Score = 65.9 bits (159), Expect = 5e-09
Identities = 45/168 (26%), Positives = 72/168 (42%)
Frame = -2
Query: 561 TWNAVLCGCLQTGRTQQVFGLLSEMQDAGFNPNQITLTAVLTACTNLECLRGGKEIHGYI 382
T + ++ G + L + ++ G P+ V AC KE+H
Sbjct: 99 TCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKEVHDDA 158
Query: 381 FRHCFVDDTTALTALIFMYAKCGKLEFSRKAFEMMPRRDTVAWNTMIIANSMHGNGEEAL 202
R + D ALI Y KC +E +R+ F+ + +D V+W +M G L
Sbjct: 159 IRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVKDVVSWTSMSSCYVNCGLPRLGL 218
Query: 201 LLFSEMLKSGAKPNAVTFTGVLSGCSHSRLVDEGLSIFYSMSRVHLIE 58
+F EM +G KPN+VT + +L CS + + G +I R +IE
Sbjct: 219 AVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIE 266
>ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498869|gb|AES80072.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 865
Score = 253 bits (647), Expect = 1e-65
Identities = 118/188 (62%), Positives = 149/188 (79%)
Frame = -2
Query: 564 ATWNAVLCGCLQTGRTQQVFGLLSEMQDAGFNPNQITLTAVLTACTNLECLRGGKEIHGY 385
ATWNAV+ GC++ GR+++ + +MQ GF PN+IT++++L AC+ E LR GKEIH Y
Sbjct: 367 ATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCY 426
Query: 384 IFRHCFVDDTTALTALIFMYAKCGKLEFSRKAFEMMPRRDTVAWNTMIIANSMHGNGEEA 205
+FRH V D T+ TAL++MYAKCG L SR F+MM R+D VAWNTMIIAN+MHGNG+EA
Sbjct: 427 VFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEA 486
Query: 204 LLLFSEMLKSGAKPNAVTFTGVLSGCSHSRLVDEGLSIFYSMSRVHLIEPDAEHHSCIVD 25
L LF +ML S +PN+VTFTGVLSGCSHSRLV+EG+ IF SM R HL+EPDA H+SC+VD
Sbjct: 487 LFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVD 546
Query: 24 VLSRAGRL 1
+ SRAGRL
Sbjct: 547 IYSRAGRL 554
Score = 105 bits (261), Expect = 7e-21
Identities = 50/164 (30%), Positives = 92/164 (56%)
Frame = -2
Query: 561 TWNAVLCGCLQTGRTQQVFGLLSEMQDAGFNPNQITLTAVLTACTNLECLRGGKEIHGYI 382
+W ++ ++ G ++ + EM +G PN +T++++L AC L+ L+ GKEIHG+
Sbjct: 232 SWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFA 291
Query: 381 FRHCFVDDTTALTALIFMYAKCGKLEFSRKAFEMMPRRDTVAWNTMIIANSMHGNGEEAL 202
RH V + +AL+ +YAKC + +R F++MP RD V+WN ++ A + E+
Sbjct: 292 VRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGF 351
Query: 201 LLFSEMLKSGAKPNAVTFTGVLSGCSHSRLVDEGLSIFYSMSRV 70
LF +M + G + + T+ V+ GC + +E + +F M ++
Sbjct: 352 SLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKM 395
Score = 65.5 bits (158), Expect = 6e-09
Identities = 41/157 (26%), Positives = 69/157 (43%)
Frame = -2
Query: 561 TWNAVLCGCLQTGRTQQVFGLLSEMQDAGFNPNQITLTAVLTACTNLECLRGGKEIHGYI 382
T + ++ G + + + S +Q+ G P+ A AC KE+H
Sbjct: 131 TCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDA 190
Query: 381 FRHCFVDDTTALTALIFMYAKCGKLEFSRKAFEMMPRRDTVAWNTMIIANSMHGNGEEAL 202
R + D ALI Y KC +E +R+ F+ + RD V+W ++ G + +
Sbjct: 191 TRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGM 250
Query: 201 LLFSEMLKSGAKPNAVTFTGVLSGCSHSRLVDEGLSI 91
+F EM SG KPN +T + +L C+ + + G I
Sbjct: 251 DVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEI 287
>gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 687
Score = 253 bits (647), Expect = 1e-65
Identities = 118/188 (62%), Positives = 149/188 (79%)
Frame = -2
Query: 564 ATWNAVLCGCLQTGRTQQVFGLLSEMQDAGFNPNQITLTAVLTACTNLECLRGGKEIHGY 385
ATWNAV+ GC++ GR+++ + +MQ GF PN+IT++++L AC+ E LR GKEIH Y
Sbjct: 281 ATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCY 340
Query: 384 IFRHCFVDDTTALTALIFMYAKCGKLEFSRKAFEMMPRRDTVAWNTMIIANSMHGNGEEA 205
+FRH V D T+ TAL++MYAKCG L SR F+MM R+D VAWNTMIIAN+MHGNG+EA
Sbjct: 341 VFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNGKEA 400
Query: 204 LLLFSEMLKSGAKPNAVTFTGVLSGCSHSRLVDEGLSIFYSMSRVHLIEPDAEHHSCIVD 25
L LF +ML S +PN+VTFTGVLSGCSHSRLV+EG+ IF SM R HL+EPDA H+SC+VD
Sbjct: 401 LFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVD 460
Query: 24 VLSRAGRL 1
+ SRAGRL
Sbjct: 461 IYSRAGRL 468
Score = 105 bits (261), Expect = 7e-21
Identities = 50/164 (30%), Positives = 92/164 (56%)
Frame = -2
Query: 561 TWNAVLCGCLQTGRTQQVFGLLSEMQDAGFNPNQITLTAVLTACTNLECLRGGKEIHGYI 382
+W ++ ++ G ++ + EM +G PN +T++++L AC L+ L+ GKEIHG+
Sbjct: 146 SWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFA 205
Query: 381 FRHCFVDDTTALTALIFMYAKCGKLEFSRKAFEMMPRRDTVAWNTMIIANSMHGNGEEAL 202
RH V + +AL+ +YAKC + +R F++MP RD V+WN ++ A + E+
Sbjct: 206 VRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGF 265
Query: 201 LLFSEMLKSGAKPNAVTFTGVLSGCSHSRLVDEGLSIFYSMSRV 70
LF +M + G + + T+ V+ GC + +E + +F M ++
Sbjct: 266 SLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKM 309
Score = 65.5 bits (158), Expect = 6e-09
Identities = 41/157 (26%), Positives = 69/157 (43%)
Frame = -2
Query: 561 TWNAVLCGCLQTGRTQQVFGLLSEMQDAGFNPNQITLTAVLTACTNLECLRGGKEIHGYI 382
T + ++ G + + + S +Q+ G P+ A AC KE+H
Sbjct: 45 TCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHDDA 104
Query: 381 FRHCFVDDTTALTALIFMYAKCGKLEFSRKAFEMMPRRDTVAWNTMIIANSMHGNGEEAL 202
R + D ALI Y KC +E +R+ F+ + RD V+W ++ G + +
Sbjct: 105 TRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVRDVVSWTSLSSCYVKCGFPRKGM 164
Query: 201 LLFSEMLKSGAKPNAVTFTGVLSGCSHSRLVDEGLSI 91
+F EM SG KPN +T + +L C+ + + G I
Sbjct: 165 DVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEI 201