BLASTX nr result
ID: Atractylodes22_contig00037888
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00037888 (731 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera] 377 e-102 ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containi... 375 e-102 ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containi... 355 4e-96 ref|XP_002510663.1| pentatricopeptide repeat-containing protein,... 354 1e-95 ref|XP_002865541.1| pentatricopeptide repeat-containing protein ... 353 2e-95 >emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera] Length = 724 Score = 377 bits (968), Expect = e-102 Identities = 189/244 (77%), Positives = 219/244 (89%), Gaps = 1/244 (0%) Frame = +3 Query: 3 LGRSEKLYEAFLLSQRQTLTPITYNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYS 182 LGRSEKLYEAFLLSQRQTLTP+TYNALIGACARN DLEKA+NLM+RMRR+GY SDFVNYS Sbjct: 235 LGRSEKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYS 294 Query: 183 LIIQSLIRSNKIDSVLLEKLYDEMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQ 362 IIQSL R+NK DS +L+K+Y E+ SD IELD QLLNDI++GFA+SGDV+RAM FL ++Q Sbjct: 295 FIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQ 354 Query: 363 GKGMSPRTSTVVSLIMQLGNLGRADEAEAVFEEIK-GDLKPRTRAYNAVLKGYVKNGSLR 539 G G+SP+T+T+V++I LGN GR +EAEA+FEE+K G L PRTRAYNA+LKGYVK GSL+ Sbjct: 355 GNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLK 414 Query: 540 DAECIVSEMERNGVSPDEHTYSLLIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRIL 719 DAE IVSEMER+G SPDEHTYSLLIDAY NAGRWESARIVLKEMEA+ V+PNS+VFSRIL Sbjct: 415 DAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRIL 474 Query: 720 ASYR 731 ASYR Sbjct: 475 ASYR 478 Score = 87.4 bits (215), Expect = 3e-15 Identities = 57/240 (23%), Positives = 117/240 (48%), Gaps = 3/240 (1%) Frame = +3 Query: 6 GRSEKLYEAFLLSQRQTLTPIT--YNALIGACARNGDLEKAINLMNRMRREGYQSDFVNY 179 GR+E+ F + L P T YNAL+ + G L+ A ++++ M R G+ D Y Sbjct: 376 GRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTY 435 Query: 180 SLIIQSLIRSNKIDSVLLEKLYDEMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVI 359 SL+I + + + +S + + EM + + + + + I+ + G ++ L + Sbjct: 436 SLLIDAYANAGRWESARI--VLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREM 493 Query: 360 QGKGMSPRTSTVVSLIMQLGNLGRADEAEAVFEEIKGD-LKPRTRAYNAVLKGYVKNGSL 536 + G+SP +I G D A A F+ ++ + ++P +N ++ + K+G Sbjct: 494 RNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHH 553 Query: 537 RDAECIVSEMERNGVSPDEHTYSLLIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRI 716 AE + M+ +G SP TY+++I+++G RWE + +L +M++ + N ++ + Sbjct: 554 NKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTL 613 Score = 83.2 bits (204), Expect = 5e-14 Identities = 52/236 (22%), Positives = 113/236 (47%), Gaps = 1/236 (0%) Frame = +3 Query: 15 EKLYEAFLLSQRQTLTPITYNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLIIQ 194 +K+Y A + S + L N +I A++GD+ +A++ + ++ G +I Sbjct: 312 QKIY-AEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVIT 370 Query: 195 SLIRSNKIDSVLLEKLYDEMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGM 374 +L + + + E +++E+ + + N ++ G+ ++G + A + ++ G Sbjct: 371 ALGNAGRTEEA--EAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGF 428 Query: 375 SPRTSTVVSLIMQLGNLGRADEAEAVFEEIKGD-LKPRTRAYNAVLKGYVKNGSLRDAEC 551 SP T LI N GR + A V +E++ ++P + ++ +L Y G + + Sbjct: 429 SPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQ 488 Query: 552 IVSEMERNGVSPDEHTYSLLIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRIL 719 ++ EM +GVSPD H Y+++ID +G + A M V+P++ ++ ++ Sbjct: 489 VLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLI 544 Score = 62.0 bits (149), Expect = 1e-07 Identities = 49/216 (22%), Positives = 96/216 (44%) Frame = +3 Query: 72 YNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLIIQSLIRSNKIDSVLLEKLYDE 251 ++ ++ + G +K+ ++ MR G D Y+++I + + N +D L +D Sbjct: 470 FSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALAT--FDR 527 Query: 252 MISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGMSPRTSTVVSLIMQLGNLGR 431 M + ++ D N ++ +SG ++A +Q G SP T+T +I G R Sbjct: 528 MRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQER 587 Query: 432 ADEAEAVFEEIKGDLKPRTRAYNAVLKGYVKNGSLRDAECIVSEMERNGVSPDEHTYSLL 611 ++ + + G ++ + N V Y G A M +G+ P + L Sbjct: 588 WEDVKTLL----GKMQSQGLLANVVT--YTTLGLSEQAINAFRVMRADGLKPSVLVLNSL 641 Query: 612 IDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRIL 719 I+A+G R A VL+ M+ ND+KP+ ++ ++ Sbjct: 642 INAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLM 677 Score = 60.5 bits (145), Expect = 4e-07 Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 1/209 (0%) Frame = +3 Query: 72 YNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLIIQSLIRSNKIDSVLLEKLYDE 251 YN +I + L+ A+ +RMR EG Q D V ++ +I +S + E+L++ Sbjct: 505 YNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKA--EELFEA 562 Query: 252 MISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGMSPRTSTVVSLIMQLGNLGR 431 M N ++ F + LG +Q +G+ T +L G Sbjct: 563 MQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTL-------GL 615 Query: 432 ADEAEAVFEEIKGD-LKPRTRAYNAVLKGYVKNGSLRDAECIVSEMERNGVSPDEHTYSL 608 +++A F ++ D LKP N+++ + ++ +A ++ M+ N + PD TY+ Sbjct: 616 SEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTT 675 Query: 609 LIDAYGNAGRWESARIVLKEMEANDVKPN 695 L+ A +++ V +EM + P+ Sbjct: 676 LMKALIRVEKFDKVPAVYEEMTLSGCTPD 704 >ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Vitis vinifera] gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera] Length = 695 Score = 375 bits (964), Expect = e-102 Identities = 188/244 (77%), Positives = 219/244 (89%), Gaps = 1/244 (0%) Frame = +3 Query: 3 LGRSEKLYEAFLLSQRQTLTPITYNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYS 182 LGRSEKLYEAFLLSQRQTLTP+TYNALIGACARN DLEKA+NLM+RMRR+G+ SDFVNYS Sbjct: 164 LGRSEKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYS 223 Query: 183 LIIQSLIRSNKIDSVLLEKLYDEMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQ 362 IIQSL R+NK DS +L+K+Y E+ SD IELD QLLNDI++GFA+SGDV+RAM FL ++Q Sbjct: 224 FIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQ 283 Query: 363 GKGMSPRTSTVVSLIMQLGNLGRADEAEAVFEEIK-GDLKPRTRAYNAVLKGYVKNGSLR 539 G G+SP+T+T+V++I LGN GR +EAEA+FEE+K G L PRTRAYNA+LKGYVK GSL+ Sbjct: 284 GNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLK 343 Query: 540 DAECIVSEMERNGVSPDEHTYSLLIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRIL 719 DAE IVSEMER+G SPDEHTYSLLIDAY NAGRWESARIVLKEMEA+ V+PNS+VFSRIL Sbjct: 344 DAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRIL 403 Query: 720 ASYR 731 ASYR Sbjct: 404 ASYR 407 Score = 81.3 bits (199), Expect = 2e-13 Identities = 65/277 (23%), Positives = 127/277 (45%), Gaps = 36/277 (12%) Frame = +3 Query: 6 GRSEKLYEAFLLSQRQTLTPIT--YNALIGACARNGDLEKAINLMNRMRREGYQSDFVNY 179 GR+E+ F + L P T YNAL+ + G L+ A ++++ M R G+ D Y Sbjct: 305 GRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTY 364 Query: 180 SLIIQSLIRSNKIDS---VLLE------------------------------KLYDEMIS 260 SL+I + + + +S VL E ++ EM + Sbjct: 365 SLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRN 424 Query: 261 DAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGMSPRTSTVVSLIMQLGNLGRADE 440 + D N ++ F + +D A+ ++ +G+ P T +LI G ++ Sbjct: 425 SGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNK 484 Query: 441 AEAVFEEIK-GDLKPRTRAYNAVLKGYVKNGSLRDAECIVSEMERNGVSPDEHTYSLLID 617 AE +FE ++ P T YN ++ + + D + ++ +M+ G+ + TY+ L+D Sbjct: 485 AEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVD 544 Query: 618 AYGNAGRWESARIVLKEMEANDVKPNSFVFSRILASY 728 YG +GR++ A L+ M++ +KP+S +++ ++ +Y Sbjct: 545 IYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAY 581 Score = 79.3 bits (194), Expect = 7e-13 Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 1/217 (0%) Frame = +3 Query: 72 YNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLIIQSLIRSNKIDSVLLEKLYDE 251 YN +I + L+ A+ +RMR EG Q D V ++ +I +S + E+L++ Sbjct: 434 YNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKA--EELFEA 491 Query: 252 MISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGMSPRTSTVVSLIMQLGNLGR 431 M N ++ F + LG +Q +G+ T +L+ G GR Sbjct: 492 MQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGR 551 Query: 432 ADEAEAVFEEIKG-DLKPRTRAYNAVLKGYVKNGSLRDAECIVSEMERNGVSPDEHTYSL 608 +A E +K LKP + YNA++ Y + G A M +G+ P + Sbjct: 552 FKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNS 611 Query: 609 LIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRIL 719 LI+A+G R A VL+ M+ ND+KP+ ++ ++ Sbjct: 612 LINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLM 648 Score = 72.8 bits (177), Expect = 7e-11 Identities = 49/220 (22%), Positives = 102/220 (46%), Gaps = 1/220 (0%) Frame = +3 Query: 72 YNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLIIQSLIRSNKIDSVLLEKLYDE 251 ++ ++ + G +K+ ++ MR G D Y+++I + + N +D L +D Sbjct: 399 FSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALAT--FDR 456 Query: 252 MISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGMSPRTSTVVSLIMQLGNLGR 431 M + ++ D N ++ +SG ++A +Q G SP T+T +I G R Sbjct: 457 MRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQER 516 Query: 432 ADEAEAVFEEIKGD-LKPRTRAYNAVLKGYVKNGSLRDAECIVSEMERNGVSPDEHTYSL 608 ++ + + +++ L Y ++ Y ++G +DA + M+ G+ P Y+ Sbjct: 517 WEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNA 576 Query: 609 LIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRILASY 728 LI+AY G E A + M A+ +KP+ V + ++ ++ Sbjct: 577 LINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAF 616 Score = 63.9 bits (154), Expect = 3e-08 Identities = 48/211 (22%), Positives = 96/211 (45%), Gaps = 1/211 (0%) Frame = +3 Query: 66 ITYNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLIIQSLIRSNKIDSVLLEKLY 245 +T+N LI ++G KA L M+ G Y+++I S + + V + L Sbjct: 467 VTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDV--KTLL 524 Query: 246 DEMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGMSPRTSTVVSLIMQLGNL 425 +M S + + +V + +SG A+ L V++ G+ P ++ +LI Sbjct: 525 GKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQR 584 Query: 426 GRADEAEAVFEEIKGD-LKPRTRAYNAVLKGYVKNGSLRDAECIVSEMERNGVSPDEHTY 602 G +++A F ++ D LKP N+++ + ++ +A ++ M+ N + PD TY Sbjct: 585 GLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTY 644 Query: 603 SLLIDAYGNAGRWESARIVLKEMEANDVKPN 695 + L+ A +++ V +EM + P+ Sbjct: 645 TTLMKALIRVEKFDKVPAVYEEMTLSGCTPD 675 Score = 63.9 bits (154), Expect = 3e-08 Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 1/205 (0%) Frame = +3 Query: 9 RSEKLYEAFLLSQRQTLTPITYNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLI 188 ++E+L+EA S T TYN +I + E L+ +M+ +G ++ V Y+ + Sbjct: 484 KAEELFEAMQESGCSPCTT-TYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTL 542 Query: 189 IQSLIRSNKIDSVLLEKLYDEMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGK 368 + +S + + + + M S ++ + N ++ +A+ G ++A+ V++ Sbjct: 543 VDIYGQSGRFKDAI--ECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRAD 600 Query: 369 GMSPRTSTVVSLIMQLGNLGRADEAEAVFEEIK-GDLKPRTRAYNAVLKGYVKNGSLRDA 545 G+ P + SLI G R EA +V + +K DLKP Y ++K ++ Sbjct: 601 GLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKV 660 Query: 546 ECIVSEMERNGVSPDEHTYSLLIDA 620 + EM +G +PD ++L A Sbjct: 661 PAVYEEMTLSGCTPDRKARAMLRSA 685 >ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like [Cucumis sativus] gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial-like [Cucumis sativus] Length = 720 Score = 355 bits (912), Expect = 4e-96 Identities = 171/244 (70%), Positives = 216/244 (88%), Gaps = 1/244 (0%) Frame = +3 Query: 3 LGRSEKLYEAFLLSQRQTLTPITYNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYS 182 LGRSEKLYEAF+LSQ+QTLTP+TYNALIGACARN DLEKA+NLM+RMR++G+QSDF+NYS Sbjct: 189 LGRSEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFINYS 248 Query: 183 LIIQSLIRSNKIDSVLLEKLYDEMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQ 362 LIIQSL R+NKID LL+KLY+E+ SD IELD LLNDI+LGFA++GD +RA+YFL ++Q Sbjct: 249 LIIQSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQ 308 Query: 363 GKGMSPRTSTVVSLIMQLGNLGRADEAEAVFEEIK-GDLKPRTRAYNAVLKGYVKNGSLR 539 G++P+TST V++I LGN GR +EAEA+FEE+K G LKPR +A+NA+LKGY + GSL+ Sbjct: 309 ASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLK 368 Query: 540 DAECIVSEMERNGVSPDEHTYSLLIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRIL 719 +AE I+SEME++G+SPDEHTY LL+DAY N GRWESAR +LK+MEA +V+PN+F+FSRIL Sbjct: 369 EAESIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRIL 428 Query: 720 ASYR 731 ASYR Sbjct: 429 ASYR 432 Score = 83.6 bits (205), Expect = 4e-14 Identities = 52/240 (21%), Positives = 116/240 (48%), Gaps = 1/240 (0%) Frame = +3 Query: 15 EKLYEAFLLSQRQTLTPITYNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLIIQ 194 +KLYE + S + L + N +I A+ GD +A+ ++ ++ G + +I Sbjct: 266 QKLYEE-IESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVIS 324 Query: 195 SLIRSNKIDSVLLEKLYDEMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGM 374 +L + + E +++EM ++ + N ++ G+AR G + A + ++ G+ Sbjct: 325 ALGNHGRTEEA--EAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGL 382 Query: 375 SPRTSTVVSLIMQLGNLGRADEAEAVFEEIKG-DLKPRTRAYNAVLKGYVKNGSLRDAEC 551 SP T L+ N+GR + A + ++++ +++P T ++ +L Y G + Sbjct: 383 SPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFE 442 Query: 552 IVSEMERNGVSPDEHTYSLLIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRILASYR 731 ++ EM+ + V PD H Y+++ID +G + A M + ++P+ ++ ++ +R Sbjct: 443 VLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHR 502 Score = 73.9 bits (180), Expect = 3e-11 Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 3/241 (1%) Frame = +3 Query: 6 GRSEKLYEAFLLSQRQTLTPIT--YNALIGACARNGDLEKAINLMNRMRREGYQSDFVNY 179 G +K +E + + P YN +I + L+ A+ +RM EG + D V + Sbjct: 435 GEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTW 494 Query: 180 SLIIQSLIRSNKIDSVLLEKLYDEMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVI 359 + +I + D +L++EM N ++ D LG + Sbjct: 495 NTLIDCHRKHGYHDRAA--ELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKM 552 Query: 360 QGKGMSPRTSTVVSLIMQLGNLGRADEAEAVFEEIKG-DLKPRTRAYNAVLKGYVKNGSL 536 Q +G+ P T +L+ G+ GR ++A E +K LKP YNA++ + + G Sbjct: 553 QSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLS 612 Query: 537 RDAECIVSEMERNGVSPDEHTYSLLIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRI 716 A M +G+ P + LI+A+G R A +L+ M+ NDVKP+ ++ + Sbjct: 613 EQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTL 672 Query: 717 L 719 + Sbjct: 673 M 673 Score = 70.9 bits (172), Expect = 3e-10 Identities = 54/222 (24%), Positives = 107/222 (48%), Gaps = 2/222 (0%) Frame = +3 Query: 69 TYNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLIIQSLIRSNKIDSVLLEKLYD 248 TY L+ A A G E A +L+ +M Q + +S I+ S + ++ Sbjct: 388 TYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTF--EVLR 445 Query: 249 EMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGMSPRTSTVVSLIMQLGNLG 428 EM + ++ D N ++ F + +D AM + +G+ P T +LI G Sbjct: 446 EMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHG 505 Query: 429 RADEAEAVFEEI--KGDLKPRTRAYNAVLKGYVKNGSLRDAECIVSEMERNGVSPDEHTY 602 D A +FEE+ +G L P YN ++ + + + ++ +M+ G+ P+ TY Sbjct: 506 YHDRAAELFEEMQERGYL-PCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTY 564 Query: 603 SLLIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRILASY 728 + L+D YG++GR+ A L+ M++ +KP++ +++ ++ ++ Sbjct: 565 TTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAF 606 Score = 65.5 bits (158), Expect = 1e-08 Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 1/211 (0%) Frame = +3 Query: 66 ITYNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLIIQSLIRSNKIDSVLLEKLY 245 +T+N LI ++G ++A L M+ GY Y+++I SL K D V + L Sbjct: 492 VTWNTLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKI--LL 549 Query: 246 DEMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGMSPRTSTVVSLIMQLGNL 425 +M S + + +V + SG + A+ L ++ G+ P + +LI Sbjct: 550 GKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQR 609 Query: 426 GRADEAEAVFEEIKGD-LKPRTRAYNAVLKGYVKNGSLRDAECIVSEMERNGVSPDEHTY 602 G +++A + + D L+P A N+++ + ++ +A I+ M+ N V PD TY Sbjct: 610 GLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTY 669 Query: 603 SLLIDAYGNAGRWESARIVLKEMEANDVKPN 695 + L+ A +++ V +EM + P+ Sbjct: 670 TTLMKALIRVDKFDKVPAVYEEMILSGCTPD 700 Score = 57.0 bits (136), Expect = 4e-06 Identities = 41/187 (21%), Positives = 83/187 (44%), Gaps = 1/187 (0%) Frame = +3 Query: 63 PITYNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLIIQSLIRSNKIDSVLLEKL 242 P TYN +I + ++ L+ +M+ +G + V Y+ ++ S + + + Sbjct: 526 PTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAI--DC 583 Query: 243 YDEMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGMSPRTSTVVSLIMQLGN 422 + M S ++ + N ++ FA+ G ++A+ V+ G+ P + SLI G Sbjct: 584 LEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGE 643 Query: 423 LGRADEAEAVFEEIK-GDLKPRTRAYNAVLKGYVKNGSLRDAECIVSEMERNGVSPDEHT 599 R EA ++ + +K D+KP Y ++K ++ + EM +G +PD Sbjct: 644 DRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKA 703 Query: 600 YSLLIDA 620 ++L A Sbjct: 704 RAMLRSA 710 >ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 695 Score = 354 bits (908), Expect = 1e-95 Identities = 177/244 (72%), Positives = 215/244 (88%), Gaps = 1/244 (0%) Frame = +3 Query: 3 LGRSEKLYEAFLLSQRQTLTPITYNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYS 182 LGRSEKLYEAFLLSQ+Q L+P+TYNALI ACARN DLEKAINL++RMR++GY SDFVNYS Sbjct: 164 LGRSEKLYEAFLLSQQQALSPLTYNALINACARNNDLEKAINLISRMRQDGYPSDFVNYS 223 Query: 183 LIIQSLIRSNKIDSVLLEKLYDEMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQ 362 LIIQSL+RSN+IDS +L+KLY E+ D +ELD QL NDI++GFA++GD ++AM FLG++Q Sbjct: 224 LIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQ 283 Query: 363 GKGMSPRTSTVVSLIMQLGNLGRADEAEAVFEEIKGD-LKPRTRAYNAVLKGYVKNGSLR 539 G+SPRT+T++++I LG+ GR EAEA+FEE+K + LKP+TRAYN +LKGYVK G L+ Sbjct: 284 ASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLK 343 Query: 540 DAECIVSEMERNGVSPDEHTYSLLIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRIL 719 DAE IVSEMER+GVSPDE TYSLLIDAY NAGRWESARIVLKEMEAN++ PNS+VFSRIL Sbjct: 344 DAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRIL 403 Query: 720 ASYR 731 ASYR Sbjct: 404 ASYR 407 Score = 80.5 bits (197), Expect = 3e-13 Identities = 56/217 (25%), Positives = 99/217 (45%), Gaps = 1/217 (0%) Frame = +3 Query: 72 YNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLIIQSLIRSNKIDSVLLEKLYDE 251 YN +I + L+ A++ ++M EG Q D V ++ +I ++ + E+L++E Sbjct: 434 YNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERA--EELFEE 491 Query: 252 MISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGMSPRTSTVVSLIMQLGNLGR 431 M+ N ++ F D +G ++ G+ P T +LI G GR Sbjct: 492 MMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGR 551 Query: 432 ADEAEAVFEEIKG-DLKPRTRAYNAVLKGYVKNGSLRDAECIVSEMERNGVSPDEHTYSL 608 +A E++K LKP + YNA++ Y + G A M + + P + Sbjct: 552 FSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNS 611 Query: 609 LIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRIL 719 LI+A+G R A VLK M+ ND+KP+ ++ ++ Sbjct: 612 LINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLM 648 Score = 74.3 bits (181), Expect = 2e-11 Identities = 48/220 (21%), Positives = 104/220 (47%), Gaps = 1/220 (0%) Frame = +3 Query: 72 YNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLIIQSLIRSNKIDSVLLEKLYDE 251 ++ ++ + G+ +K+ ++ M+ G + D Y+++I + + + +D + +D+ Sbjct: 399 FSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAM--DTFDK 456 Query: 252 MISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGMSPRTSTVVSLIMQLGNLGR 431 M+S+ I+ D N ++ ++ +RA + KG SP +T +I G R Sbjct: 457 MLSEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQER 516 Query: 432 ADEAEAVFEEIKG-DLKPRTRAYNAVLKGYVKNGSLRDAECIVSEMERNGVSPDEHTYSL 608 D+ + + ++ L P Y ++ Y K+G DA + +M+ G+ P Y+ Sbjct: 517 WDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNA 576 Query: 609 LIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRILASY 728 LI+AY G E A + M A+ +KP+ + ++ ++ Sbjct: 577 LINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAF 616 Score = 73.9 bits (180), Expect = 3e-11 Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 40/282 (14%) Frame = +3 Query: 3 LGRSEKLYEAFLLSQRQT---LTPIT--YNALIGACARNGDLEKAINLMNRMRREGYQSD 167 LG S ++ EA + + L P T YN L+ + G L+ A +++ M R G D Sbjct: 301 LGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPD 360 Query: 168 FVNYSLIIQSLIRSNKIDS---VLLE------------------------------KLYD 248 YSL+I + + + +S VL E ++ Sbjct: 361 ECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLK 420 Query: 249 EMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGMSPRTSTVVSLIMQLGNLG 428 EM + + D N ++ F + +D AM + +G+ P T T +LI Sbjct: 421 EMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAE 480 Query: 429 RADEAEAVFEEI--KGDLKPRTRAYNAVLKGYVKNGSLRDAECIVSEMERNGVSPDEHTY 602 + AE +FEE+ KG P +N ++ + + D + ++ M G+ P+ TY Sbjct: 481 LHERAEELFEEMMEKG-FSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTY 539 Query: 603 SLLIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRILASY 728 + LID YG +GR+ A L++M++ +KP+S +++ ++ +Y Sbjct: 540 TTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAY 581 Score = 57.0 bits (136), Expect = 4e-06 Identities = 45/205 (21%), Positives = 91/205 (44%), Gaps = 1/205 (0%) Frame = +3 Query: 9 RSEKLYEAFLLSQRQTLTPITYNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLI 188 R+E+L+E ++ + + T+N +I + + LM MR G + V Y+ + Sbjct: 484 RAEELFEE-MMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTL 542 Query: 189 IQSLIRSNKIDSVLLEKLYDEMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGK 368 I +S + + + ++M S ++ + N ++ +A+ G ++A+ +++ Sbjct: 543 IDIYGKSGRFSDAI--ECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRAD 600 Query: 369 GMSPRTSTVVSLIMQLGNLGRADEAEAVFEEIK-GDLKPRTRAYNAVLKGYVKNGSLRDA 545 + P + SLI G R EA +V + +K DLKP Y ++K ++ Sbjct: 601 SLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKV 660 Query: 546 ECIVSEMERNGVSPDEHTYSLLIDA 620 + EM G +PD ++L A Sbjct: 661 PSVYEEMILAGCTPDRKARAMLRSA 685 >ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297311376|gb|EFH41800.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 711 Score = 353 bits (906), Expect = 2e-95 Identities = 175/244 (71%), Positives = 211/244 (86%), Gaps = 1/244 (0%) Frame = +3 Query: 3 LGRSEKLYEAFLLSQRQTLTPITYNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYS 182 LGRSEKLYEAFLLSQ+QTLTP+TYNALIGACARN D+EKA+NL++RMR++GYQSDFVNYS Sbjct: 179 LGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYS 238 Query: 183 LIIQSLIRSNKIDSVLLEKLYDEMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQ 362 L+IQSL R NKIDSV+L++LY E+ D +ELD QL+NDI++GFA+SGD RA+ LG+ Q Sbjct: 239 LVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQ 298 Query: 363 GKGMSPRTSTVVSLIMQLGNLGRADEAEAVFEEIK-GDLKPRTRAYNAVLKGYVKNGSLR 539 G+S +T+T+VS+I L N GR EAEA+FEE++ +KPRT+AYNA+LKGYVK G L+ Sbjct: 299 ATGLSAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLK 358 Query: 540 DAECIVSEMERNGVSPDEHTYSLLIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRIL 719 DAE +VSEME+ GVSPDEHTYSLLIDAY NAGRWESARIVLKEME DV+PNSFVFSR+L Sbjct: 359 DAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLL 418 Query: 720 ASYR 731 A YR Sbjct: 419 AGYR 422 Score = 79.3 bits (194), Expect = 7e-13 Identities = 70/274 (25%), Positives = 125/274 (45%), Gaps = 35/274 (12%) Frame = +3 Query: 12 SEKLYEAFLLSQRQTLTPITYNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLII 191 +E L+E S + T YNAL+ + G L+ A +++ M + G D YSL+I Sbjct: 325 AEALFEELRQSGIKPRTK-AYNALLKGYVKTGPLKDAELMVSEMEKRGVSPDEHTYSLLI 383 Query: 192 QSLIRSNKIDS---VLLE------------------------------KLYDEMISDAIE 272 + + + + +S VL E ++ EM S ++ Sbjct: 384 DAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTFQVLKEMKSIGVK 443 Query: 273 LDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGMSPRTSTVVSLIMQLGNLGRADEAEAV 452 D Q N ++ F + +D AM + +G+ P T +LI GR AE + Sbjct: 444 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 503 Query: 453 FE--EIKGDLKPRTRAYNAVLKGYVKNGSLRDAECIVSEMERNGVSPDEHTYSLLIDAYG 626 FE E +G L P YN ++ Y D + ++ +M+ G+ P+ T++ L+D YG Sbjct: 504 FEAMERRGCL-PCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYG 562 Query: 627 NAGRWESARIVLKEMEANDVKPNSFVFSRILASY 728 +GR+ A L+EM++ +KP+S +++ ++ +Y Sbjct: 563 KSGRFNDAIECLEEMKSVGLKPSSTMYNALINAY 596 Score = 74.3 bits (181), Expect = 2e-11 Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 1/217 (0%) Frame = +3 Query: 72 YNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLIIQSLIRSNKIDSVLLEKLYDE 251 YN +I + L+ A+ +RM EG + D V ++ +I + + ++ E++++ Sbjct: 449 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR--HIVAEEMFEA 506 Query: 252 MISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGMSPRTSTVVSLIMQLGNLGR 431 M N ++ + D LG ++ +G+ P T +L+ G GR Sbjct: 507 MERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 566 Query: 432 ADEAEAVFEEIKG-DLKPRTRAYNAVLKGYVKNGSLRDAECIVSEMERNGVSPDEHTYSL 608 ++A EE+K LKP + YNA++ Y + G A M +G+ P + Sbjct: 567 FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 626 Query: 609 LIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRIL 719 LI+A+G R A VL+ M+ N VKP+ ++ ++ Sbjct: 627 LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 663 Score = 70.1 bits (170), Expect = 4e-10 Identities = 48/220 (21%), Positives = 101/220 (45%), Gaps = 1/220 (0%) Frame = +3 Query: 72 YNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLIIQSLIRSNKIDSVLLEKLYDE 251 ++ L+ G+ +K ++ M+ G + D Y+++I + + N +D + +D Sbjct: 414 FSRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTT--FDR 471 Query: 252 MISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGMSPRTSTVVSLIMQLGNLGR 431 M+S+ IE D N ++ + G A ++ +G P +T +I G+ R Sbjct: 472 MLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQER 531 Query: 432 ADEAEAVFEEIKGD-LKPRTRAYNAVLKGYVKNGSLRDAECIVSEMERNGVSPDEHTYSL 608 D+ + + ++K + P + ++ Y K+G DA + EM+ G+ P Y+ Sbjct: 532 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 591 Query: 609 LIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRILASY 728 LI+AY G E A + M ++ +KP+ + ++ ++ Sbjct: 592 LINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAF 631 Score = 65.1 bits (157), Expect = 1e-08 Identities = 53/223 (23%), Positives = 103/223 (46%), Gaps = 1/223 (0%) Frame = +3 Query: 66 ITYNALIGACARNGDLEKAINLMNRMRREGYQSDFVNYSLIIQSLIRSNKIDSVLLEKLY 245 +T+N LI ++G A + M R G Y+++I S + D +++L Sbjct: 482 VTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD--MKRLL 539 Query: 246 DEMISDAIELDWQLLNDIVLGFARSGDVDRAMYFLGVIQGKGMSPRTSTVVSLIMQLGNL 425 +M S I + +V + +SG + A+ L ++ G+ P ++ +LI Sbjct: 540 GKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQR 599 Query: 426 GRADEAEAVFEEIKGD-LKPRTRAYNAVLKGYVKNGSLRDAECIVSEMERNGVSPDEHTY 602 G +++A F + D LKP A N+++ + ++ +A ++ M+ NGV PD TY Sbjct: 600 GLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTY 659 Query: 603 SLLIDAYGNAGRWESARIVLKEMEANDVKPNSFVFSRILASYR 731 + L+ A +++ V +EM + KP+ S + ++ R Sbjct: 660 TTLMKALIRVDKFQKVPGVYEEMIMSGCKPDRKARSMLRSALR 702