BLASTX nr result

ID: Atractylodes22_contig00037050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00037050
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548180.1| PREDICTED: cleavage and polyadenylation spec...    60   3e-07
ref|XP_003548179.1| PREDICTED: cleavage and polyadenylation spec...    60   3e-07
ref|XP_002517902.1| cleavage and polyadenylation specificity fac...    60   3e-07
ref|XP_003590295.1| Cleavage and polyadenylation specificity fac...    60   4e-07
ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation spec...    59   9e-07

>ref|XP_003548180.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2-like isoform 2 [Glycine max]
          Length = 743

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -2

Query: 110 LSYRVSINGFNLLRDCGWNDHFVLSLLQPLSRVVST 3
           LSY VSI+GFN L DCGWNDHF  SLLQPL+RV ST
Sbjct: 19  LSYLVSIDGFNFLVDCGWNDHFDPSLLQPLARVAST 54


>ref|XP_003548179.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2-like isoform 1 [Glycine max]
          Length = 738

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -2

Query: 110 LSYRVSINGFNLLRDCGWNDHFVLSLLQPLSRVVST 3
           LSY VSI+GFN L DCGWNDHF  SLLQPL+RV ST
Sbjct: 19  LSYLVSIDGFNFLVDCGWNDHFDPSLLQPLARVAST 54


>ref|XP_002517902.1| cleavage and polyadenylation specificity factor, putative [Ricinus
           communis] gi|223542884|gb|EEF44420.1| cleavage and
           polyadenylation specificity factor, putative [Ricinus
           communis]
          Length = 740

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -2

Query: 110 LSYRVSINGFNLLRDCGWNDHFVLSLLQPLSRVVST 3
           LSY +SI+ FNLL DCGWNDHF  SLLQPLSRV ST
Sbjct: 19  LSYLISIDNFNLLIDCGWNDHFDPSLLQPLSRVAST 54


>ref|XP_003590295.1| Cleavage and polyadenylation specificity factor subunit [Medicago
           truncatula] gi|355479343|gb|AES60546.1| Cleavage and
           polyadenylation specificity factor subunit [Medicago
           truncatula]
          Length = 630

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -2

Query: 110 LSYRVSINGFNLLRDCGWNDHFVLSLLQPLSRVVST 3
           LSY VSI+ FN+L DCGWNDHF  SLLQPLSRV ST
Sbjct: 19  LSYLVSIDSFNILIDCGWNDHFDPSLLQPLSRVAST 54


>ref|XP_002268591.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           2 [Vitis vinifera] gi|302143847|emb|CBI22708.3| unnamed
           protein product [Vitis vinifera]
          Length = 740

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = -2

Query: 110 LSYRVSINGFNLLRDCGWNDHFVLSLLQPLSRVVST 3
           LSY VSI+GFN L DCGWNDHF  S LQPL+RV ST
Sbjct: 19  LSYLVSIDGFNFLVDCGWNDHFDPSFLQPLARVAST 54


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