BLASTX nr result

ID: Atractylodes22_contig00036428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036428
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526570.1| brca1 associated ring domain, putative [Rici...    81   1e-13
ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    78   7e-13
gb|AAD10669.1| Hypothetical protein [Arabidopsis thaliana]             77   2e-12
ref|NP_171898.2| BRCA1-associated RING domain protein 1 [Arabido...    77   2e-12
emb|CBI37160.3| unnamed protein product [Vitis vinifera]               77   2e-12

>ref|XP_002526570.1| brca1 associated ring domain, putative [Ricinus communis]
           gi|223534131|gb|EEF35848.1| brca1 associated ring
           domain, putative [Ricinus communis]
          Length = 744

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/86 (47%), Positives = 56/86 (65%)
 Frame = +3

Query: 3   GPKAGRLRILNNGPKLFNNWNFYFIGDFVQAFKMDLLNLVTTAGGRIIESKDELVSLSND 182
           GP+ GRL +L+N PKLF+  NFYF GDFV  +K DL NLV  AGG I++SK+++V  S+ 
Sbjct: 607 GPRTGRLSVLDNAPKLFSGLNFYFAGDFVSGYKEDLQNLVLAAGGTILDSKEKVVEQSH- 665

Query: 183 ADAGVKRSSLVVYNADHSDQSEFGDE 260
            +      +LVVYN D     + G+E
Sbjct: 666 -NEATPSRTLVVYNFDPPLGCKLGEE 690


>ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine
           max]
          Length = 678

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/88 (46%), Positives = 52/88 (59%)
 Frame = +3

Query: 3   GPKAGRLRILNNGPKLFNNWNFYFIGDFVQAFKMDLLNLVTTAGGRIIESKDELVSLSND 182
           GPKAGRLR L N PKLFN   FYF GD+V  +K DL  L+   GG ++ SK+EL S  ++
Sbjct: 553 GPKAGRLRALANEPKLFNGLKFYFSGDYVSTYKEDLEELIEVGGGTVLRSKEELESQRHE 612

Query: 183 ADAGVKRSSLVVYNADHSDQSEFGDEDS 266
              G     L+VYN D     + G+E S
Sbjct: 613 C-KGDSSQLLIVYNLDPPQGCKLGEEVS 639


>gb|AAD10669.1| Hypothetical protein [Arabidopsis thaliana]
          Length = 727

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/86 (46%), Positives = 51/86 (59%)
 Frame = +3

Query: 3   GPKAGRLRILNNGPKLFNNWNFYFIGDFVQAFKMDLLNLVTTAGGRIIESKDELVSLSND 182
           GPK  RLR   N PKLF    FYF GDF + +K DL NLV  AGG I+ ++DEL + S++
Sbjct: 600 GPKTARLRAETNKPKLFEGLKFYFFGDFYKGYKEDLQNLVKVAGGTILNTEDELGAESSN 659

Query: 183 ADAGVKRSSLVVYNADHSDQSEFGDE 260
                + SS+VVYN D       G+E
Sbjct: 660 NVNDQRSSSIVVYNIDPPHGCALGEE 685


>ref|NP_171898.2| BRCA1-associated RING domain protein 1 [Arabidopsis thaliana]
           gi|332189526|gb|AEE27647.1| BRCA1-associated RING domain
           protein 1 [Arabidopsis thaliana]
          Length = 714

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/86 (46%), Positives = 51/86 (59%)
 Frame = +3

Query: 3   GPKAGRLRILNNGPKLFNNWNFYFIGDFVQAFKMDLLNLVTTAGGRIIESKDELVSLSND 182
           GPK  RLR   N PKLF    FYF GDF + +K DL NLV  AGG I+ ++DEL + S++
Sbjct: 587 GPKTARLRAETNKPKLFEGLKFYFFGDFYKGYKEDLQNLVKVAGGTILNTEDELGAESSN 646

Query: 183 ADAGVKRSSLVVYNADHSDQSEFGDE 260
                + SS+VVYN D       G+E
Sbjct: 647 NVNDQRSSSIVVYNIDPPHGCALGEE 672


>emb|CBI37160.3| unnamed protein product [Vitis vinifera]
          Length = 419

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 39/87 (44%), Positives = 57/87 (65%)
 Frame = +3

Query: 3   GPKAGRLRILNNGPKLFNNWNFYFIGDFVQAFKMDLLNLVTTAGGRIIESKDELVSLSND 182
           GPK GRLR L+N PKLF +  FYFIGDFV  +K+DL++L+  AGG ++  K++LV+  +D
Sbjct: 294 GPKTGRLRSLDNAPKLFKDLIFYFIGDFVPTYKIDLVDLIRAAGGFVLACKNKLVAQVHD 353

Query: 183 ADAGVKRSSLVVYNADHSDQSEFGDED 263
                  ++LVVYN +    S   ++D
Sbjct: 354 GRI-APSTALVVYNLEPPQGSMLREDD 379


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