BLASTX nr result

ID: Atractylodes22_contig00036057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036057
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ33519.1| CACTA transposable element [Dahlia pinnata]           101   8e-20

>dbj|BAJ33519.1| CACTA transposable element [Dahlia pinnata]
          Length = 606

 Score =  101 bits (251), Expect = 8e-20
 Identities = 60/150 (40%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
 Frame = -2

Query: 520 IMSIDKTWTTIEHRNSEEFLKGLDSFVERSKAHVDIRGLIRCPCRKCVNSGFTTIPXXXX 341
           IMS+DK+W +I +R S E+ +GL SF+E  K HVD RG +RC C KC N+    IP    
Sbjct: 27  IMSVDKSWLSIRNRRSPEYEQGLTSFIEMCKEHVDSRGYVRCACAKCQNT--LLIP---- 80

Query: 340 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHRFGFCKRYITWVYHGESRTPPVVV 161
                                             +H +G  + Y  W YHGES  P VVV
Sbjct: 81  ---------------------------FIKMKYHMHAYGILRTYDIWTYHGESLIPAVVV 113

Query: 160 --DVAPRDEMAGVIDDVMGEFRENDTNHDE 77
             DVAP ++MAGVI+DVM E  E D N DE
Sbjct: 114 VDDVAPTNDMAGVIEDVMYERMEEDINLDE 143


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