BLASTX nr result

ID: Atractylodes22_contig00036004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00036004
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]   151   5e-35
ref|XP_002511804.1| pentatricopeptide repeat-containing protein,...   139   3e-31
ref|XP_003623821.1| Pentatricopeptide repeat-containing protein ...   135   5e-30
ref|XP_002302563.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|NP_001172681.1| Os01g0884800 [Oryza sativa Japonica Group] g...   116   2e-24

>emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
          Length = 440

 Score =  151 bits (382), Expect = 5e-35
 Identities = 71/94 (75%), Positives = 83/94 (88%)
 Frame = -3

Query: 282 SSLSVDNSLVTMYTNCGCIEDASKVFASMDSKNVITWTALIMGYAKNGKSKESLVFYNEM 103
           SSLSVDNSLV+MY  CGCIEDA+KVF SM+ ++VITWTALI+GYA+NG+ +ESL FYN+M
Sbjct: 101 SSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBM 160

Query: 102 IESGIKPDFITFIGLLFACSHAGLVDQARQYFDS 1
           I SG+KPDFITFIGLLFACSHAGLV+  R YF S
Sbjct: 161 IASGVKPDFITFIGLLFACSHAGLVEHGRSYFQS 194



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/86 (38%), Positives = 49/86 (56%)
 Frame = -3

Query: 270 VDNSLVTMYTNCGCIEDASKVFASMDSKNVITWTALIMGYAKNGKSKESLVFYNEMIESG 91
           V+N+LV MY   G  + A  VF  M  K+VI+WT+L+ G   NG  +E+L  + EM   G
Sbjct: 4   VNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMG 63

Query: 90  IKPDFITFIGLLFACSHAGLVDQARQ 13
           I PD I    +L AC+   +++  +Q
Sbjct: 64  IHPDQIVIAAVLSACAELTVLEFGKQ 89


>ref|XP_002511804.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548984|gb|EEF50473.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 607

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/94 (69%), Positives = 80/94 (85%)
 Frame = -3

Query: 282 SSLSVDNSLVTMYTNCGCIEDASKVFASMDSKNVITWTALIMGYAKNGKSKESLVFYNEM 103
           SSLS+DNSLVTMY  CG IEDA+ VF SM  ++VI+WTALI+GYA+NG+ K+SL FY++M
Sbjct: 456 SSLSIDNSLVTMYAKCGGIEDANYVFDSMQIRDVISWTALIVGYAQNGRGKDSLHFYDQM 515

Query: 102 IESGIKPDFITFIGLLFACSHAGLVDQARQYFDS 1
           I +G KPDFITFIGLLFACSH GLV+  R+YF+S
Sbjct: 516 IATGTKPDFITFIGLLFACSHTGLVEDGRRYFES 549



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/86 (33%), Positives = 52/86 (60%)
 Frame = -3

Query: 270 VDNSLVTMYTNCGCIEDASKVFASMDSKNVITWTALIMGYAKNGKSKESLVFYNEMIESG 91
           V+N+LV MY   G ++ A  VF  M  K+V++WT+L+ GY+ NG  ++++  + +M  +G
Sbjct: 359 VNNALVDMYAKQGNLDYAFTVFNQMPDKDVVSWTSLVTGYSYNGSYEDAIKLFCDMRIAG 418

Query: 90  IKPDFITFIGLLFACSHAGLVDQARQ 13
           + PD I    +L AC+   + +  +Q
Sbjct: 419 VCPDQIVLASVLSACAELTVTEFGQQ 444



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/80 (36%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
 Frame = -3

Query: 282 SSLSVDNSLVTMYTNCGCIEDASKVFASM-DSKNVITWTALIMGYAKNGKSKESLVFYNE 106
           +++ V  SLV +Y  C CI +A  +F  + DSKN  TWTA++ GY+ NG    ++  + +
Sbjct: 152 ANVFVVTSLVDLYAKCECISEAEYIFEMVADSKNHATWTAMLTGYSHNGDGFRAIKCFRD 211

Query: 105 MIESGIKPDFITFIGLLFAC 46
           M   G++ +  TF  +L AC
Sbjct: 212 MRAEGVESNQFTFPSILTAC 231


>ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498836|gb|AES80039.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  135 bits (339), Expect = 5e-30
 Identities = 61/91 (67%), Positives = 74/91 (81%)
 Frame = -3

Query: 279 SLSVDNSLVTMYTNCGCIEDASKVFASMDSKNVITWTALIMGYAKNGKSKESLVFYNEMI 100
           S SV NSLV MY  CGC++DA  +F SM  K+VITWTA+I+GYA+NGK + SL FY+ M+
Sbjct: 499 SQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMV 558

Query: 99  ESGIKPDFITFIGLLFACSHAGLVDQARQYF 7
            SG +PDFITFIGLLFACSHAGLVD+ R+YF
Sbjct: 559 SSGTRPDFITFIGLLFACSHAGLVDEGRKYF 589



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 33/86 (38%), Positives = 51/86 (59%)
 Frame = -3

Query: 270 VDNSLVTMYTNCGCIEDASKVFASMDSKNVITWTALIMGYAKNGKSKESLVFYNEMIESG 91
           V N+LV MY   G ++ A  VF  M  K+VI+WT+L+ GYA+N   +ESL  + +M  +G
Sbjct: 401 VSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTG 460

Query: 90  IKPDFITFIGLLFACSHAGLVDQARQ 13
           + PD      +L AC+   L++  +Q
Sbjct: 461 VNPDQFIVASILSACAELTLLEFGKQ 486



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = -3

Query: 270 VDNSLVTMYTNCGCIEDASKVFASM--DSKNVITWTALIMGYAKNGKSKESLVFYNEMIE 97
           V   LV MY  C C+ +A  +F  +  D KN + WTA++ GYA+NG   +++ F+  M  
Sbjct: 199 VVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHA 258

Query: 96  SGIKPDFITFIGLLFACS 43
            G++ +  TF  +L ACS
Sbjct: 259 QGVECNQYTFPTILTACS 276



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 24/79 (30%), Positives = 48/79 (60%)
 Frame = -3

Query: 282 SSLSVDNSLVTMYTNCGCIEDASKVFASMDSKNVITWTALIMGYAKNGKSKESLVFYNEM 103
           S++ V ++LV MY  CG +++A  +  +M+  +V++W +L++G+ ++G  +E+L  +  M
Sbjct: 298 SNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNM 357

Query: 102 IESGIKPDFITFIGLLFAC 46
               +K D  TF  +L  C
Sbjct: 358 HGRNMKIDDYTFPSVLNCC 376


>ref|XP_002302563.1| predicted protein [Populus trichocarpa] gi|222844289|gb|EEE81836.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/94 (63%), Positives = 77/94 (81%)
 Frame = -3

Query: 282 SSLSVDNSLVTMYTNCGCIEDASKVFASMDSKNVITWTALIMGYAKNGKSKESLVFYNEM 103
           SSLSVDNSLVTMY  CG I DA++ F +M +++VI+WTALI+GYA+NG+ K SL FY++M
Sbjct: 175 SSLSVDNSLVTMYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQM 234

Query: 102 IESGIKPDFITFIGLLFACSHAGLVDQARQYFDS 1
           I +G KPD+ITFIGLLFACSH GL+   R YF++
Sbjct: 235 IATGTKPDYITFIGLLFACSHNGLLGSGRAYFEA 268



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/86 (36%), Positives = 54/86 (62%)
 Frame = -3

Query: 270 VDNSLVTMYTNCGCIEDASKVFASMDSKNVITWTALIMGYAKNGKSKESLVFYNEMIESG 91
           V+N+L+ MY   G ++ A  VF+ M  K+V++WT+L+ GY+ NG  +E++  + +M  SG
Sbjct: 78  VNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEEAIKLFCKMRISG 137

Query: 90  IKPDFITFIGLLFACSHAGLVDQARQ 13
           + PD I    +L AC+   ++D  +Q
Sbjct: 138 VYPDQIAVASVLSACAELTVMDFGQQ 163


>ref|NP_001172681.1| Os01g0884800 [Oryza sativa Japonica Group]
           gi|20161229|dbj|BAB90156.1| selenium-binding
           protein-like [Oryza sativa Japonica Group]
           gi|255673935|dbj|BAH91411.1| Os01g0884800 [Oryza sativa
           Japonica Group]
          Length = 517

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/92 (58%), Positives = 69/92 (75%)
 Frame = -3

Query: 276 LSVDNSLVTMYTNCGCIEDASKVFASMDSKNVITWTALIMGYAKNGKSKESLVFYNEMIE 97
           LSV NSLV+MY   G + DA  VF +M S+  ITWTALI+GYA+NG+ +ESL  Y +M  
Sbjct: 179 LSVGNSLVSMYAKTGSLRDARTVFDAMRSRCAITWTALIVGYAQNGRGRESLAVYADMAR 238

Query: 96  SGIKPDFITFIGLLFACSHAGLVDQARQYFDS 1
           SG +PD++TF+GLLFACSHAGL+D  R +F S
Sbjct: 239 SGCRPDYVTFVGLLFACSHAGLLDAGRAHFQS 270


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