BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034876
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE06274.1| topoisomerase II [Scutellaria baicalensis]             80   4e-27
gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...    81   3e-26
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...    77   6e-26
emb|CBI24922.3| unnamed protein product [Vitis vinifera]               77   6e-26
ref|XP_003599271.1| DNA topoisomerase [Medicago truncatula] gi|3...    78   1e-25

>dbj|BAE06274.1| topoisomerase II [Scutellaria baicalensis]
          Length = 1469

 Score = 80.5 bits (197), Expect(2) = 4e-27
 Identities = 36/44 (81%), Positives = 41/44 (93%)
 Frame = +1

Query: 295 EKHEQTLWVWEGDQMVKKQISYVPGLYKIFDEILVNAADNKQRD 426
           E+H QTLWV+E +QMV+K I+YVPGLYKIFDEILVNAADNKQRD
Sbjct: 56  ERHTQTLWVYENEQMVQKSITYVPGLYKIFDEILVNAADNKQRD 99



 Score = 65.9 bits (159), Expect(2) = 4e-27
 Identities = 34/58 (58%), Positives = 40/58 (68%)
 Frame = +3

Query: 72  MATGQRRPLQSSTTDNIPPTTKPSTGATNKTGRTIEETYQKKTQLEHILLRPDTYIGS 245
           MA G++ PL +S   NIPP      G+     +TIE+ YQKKTQLEHILLRPDTYIGS
Sbjct: 1   MAGGKKGPLTTSNNANIPPPDAAGGGSK----KTIEQAYQKKTQLEHILLRPDTYIGS 54


>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
           DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score = 80.9 bits (198), Expect(2) = 3e-26
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = +1

Query: 295 EKHEQTLWVWEGDQMVKKQISYVPGLYKIFDEILVNAADNKQRD 426
           EKH QTLWVWE D+M  + ++YVPGLYKIFDEILVNAADNKQRD
Sbjct: 48  EKHTQTLWVWENDKMTHRPVTYVPGLYKIFDEILVNAADNKQRD 91



 Score = 62.4 bits (150), Expect(2) = 3e-26
 Identities = 35/54 (64%), Positives = 40/54 (74%)
 Frame = +3

Query: 84  QRRPLQSSTTDNIPPTTKPSTGATNKTGRTIEETYQKKTQLEHILLRPDTYIGS 245
           ++ PLQSS+  NI         ATN  G+TIE+TYQKKTQLEHILLRPDTYIGS
Sbjct: 4   KKLPLQSSSNANI---------ATN--GKTIEQTYQKKTQLEHILLRPDTYIGS 46


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score = 76.6 bits (187), Expect(2) = 6e-26
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = +1

Query: 295 EKHEQTLWVWEGDQMVKKQISYVPGLYKIFDEILVNAADNKQRD 426
           EKH Q LWV+E ++MV + +SYVPGLYKIFDEILVNAADNKQRD
Sbjct: 51  EKHTQALWVFENNEMVHRSVSYVPGLYKIFDEILVNAADNKQRD 94



 Score = 65.9 bits (159), Expect(2) = 6e-26
 Identities = 36/58 (62%), Positives = 41/58 (70%)
 Frame = +3

Query: 72  MATGQRRPLQSSTTDNIPPTTKPSTGATNKTGRTIEETYQKKTQLEHILLRPDTYIGS 245
           MA   + PLQSS   N+P   KP+       G+TIEETYQKK+QLEHILLRPDTYIGS
Sbjct: 1   MAVDNKLPLQSSNNANMP--AKPA-------GKTIEETYQKKSQLEHILLRPDTYIGS 49


>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score = 76.6 bits (187), Expect(2) = 6e-26
 Identities = 34/44 (77%), Positives = 39/44 (88%)
 Frame = +1

Query: 295 EKHEQTLWVWEGDQMVKKQISYVPGLYKIFDEILVNAADNKQRD 426
           EKH Q LWV+E ++MV + +SYVPGLYKIFDEILVNAADNKQRD
Sbjct: 51  EKHTQALWVFENNEMVHRSVSYVPGLYKIFDEILVNAADNKQRD 94



 Score = 65.9 bits (159), Expect(2) = 6e-26
 Identities = 36/58 (62%), Positives = 41/58 (70%)
 Frame = +3

Query: 72  MATGQRRPLQSSTTDNIPPTTKPSTGATNKTGRTIEETYQKKTQLEHILLRPDTYIGS 245
           MA   + PLQSS   N+P   KP+       G+TIEETYQKK+QLEHILLRPDTYIGS
Sbjct: 1   MAVDNKLPLQSSNNANMP--AKPA-------GKTIEETYQKKSQLEHILLRPDTYIGS 49


>ref|XP_003599271.1| DNA topoisomerase [Medicago truncatula] gi|355488319|gb|AES69522.1|
           DNA topoisomerase [Medicago truncatula]
          Length = 1567

 Score = 78.2 bits (191), Expect(2) = 1e-25
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = +1

Query: 295 EKHEQTLWVWEGDQMVKKQISYVPGLYKIFDEILVNAADNKQRD 426
           EKH Q LWV+E ++MV + ISYVPGLYKIFDEILVNAADNKQRD
Sbjct: 44  EKHTQNLWVYENEEMVNRSISYVPGLYKIFDEILVNAADNKQRD 87



 Score = 63.5 bits (153), Expect(2) = 1e-25
 Identities = 33/54 (61%), Positives = 37/54 (68%)
 Frame = +3

Query: 84  QRRPLQSSTTDNIPPTTKPSTGATNKTGRTIEETYQKKTQLEHILLRPDTYIGS 245
           ++RPLQ STT NIP              +TIEE YQKKTQLEHILLRPDTY+GS
Sbjct: 2   EKRPLQPSTTANIP-------------SKTIEEMYQKKTQLEHILLRPDTYVGS 42