BLASTX nr result

ID: Atractylodes22_contig00034804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034804
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282314.2| PREDICTED: zinc finger CCCH domain-containin...   186   3e-45
emb|CBI16305.3| unnamed protein product [Vitis vinifera]              186   3e-45
ref|XP_003540739.1| PREDICTED: zinc finger CCCH domain-containin...   179   3e-43
ref|XP_003539207.1| PREDICTED: zinc finger CCCH domain-containin...   170   2e-40
ref|XP_002530289.1| RNA m5u methyltransferase, putative [Ricinus...   169   4e-40

>ref|XP_002282314.2| PREDICTED: zinc finger CCCH domain-containing protein 24-like
           [Vitis vinifera]
          Length = 843

 Score =  186 bits (472), Expect = 3e-45
 Identities = 98/183 (53%), Positives = 123/183 (67%), Gaps = 1/183 (0%)
 Frame = +2

Query: 44  ATETLNTPTNGSTSDVTGELNQPDDCLNVS-HSSPDAIPLGDGEQGEKRKRTESETDQKT 220
           A +TLN   NG+ +    + +  D+ L  S   S D I     E GEKRKR++       
Sbjct: 11  AKQTLNPSINGNDAPCPPQEHVGDEELKPSVPQSTDVI-----ESGEKRKRSDPADSDNC 65

Query: 221 ISVHPLWKTSLCSYFRRTGGECSHGETCRYAHGEEELRPRPDNTWDPTSERAKKLKVENE 400
              HPLWKTSLCSYFR   G CSHG+ CRYAHGEEELR RPDNTWDPTSERAKKL +++E
Sbjct: 66  R--HPLWKTSLCSYFRSHSGSCSHGDACRYAHGEEELRQRPDNTWDPTSERAKKL-LKSE 122

Query: 401 DGEKHSDGRDEEVMMTETISEEGCSESALDKCLVNLPMKWSSDNLRSFLNEQGIQYKSAK 580
            GEK  D ++++VMMTE + ++ C++  L KCL++LP KW SD LR FL +QG+ YKSAK
Sbjct: 123 SGEK-CDSKEDDVMMTEAVVDDDCADPGLSKCLLHLPPKWHSDQLRDFLGQQGVIYKSAK 181

Query: 581 TKK 589
            KK
Sbjct: 182 KKK 184


>emb|CBI16305.3| unnamed protein product [Vitis vinifera]
          Length = 788

 Score =  186 bits (472), Expect = 3e-45
 Identities = 98/183 (53%), Positives = 123/183 (67%), Gaps = 1/183 (0%)
 Frame = +2

Query: 44  ATETLNTPTNGSTSDVTGELNQPDDCLNVS-HSSPDAIPLGDGEQGEKRKRTESETDQKT 220
           A +TLN   NG+ +    + +  D+ L  S   S D I     E GEKRKR++       
Sbjct: 11  AKQTLNPSINGNDAPCPPQEHVGDEELKPSVPQSTDVI-----ESGEKRKRSDPADSDNC 65

Query: 221 ISVHPLWKTSLCSYFRRTGGECSHGETCRYAHGEEELRPRPDNTWDPTSERAKKLKVENE 400
              HPLWKTSLCSYFR   G CSHG+ CRYAHGEEELR RPDNTWDPTSERAKKL +++E
Sbjct: 66  R--HPLWKTSLCSYFRSHSGSCSHGDACRYAHGEEELRQRPDNTWDPTSERAKKL-LKSE 122

Query: 401 DGEKHSDGRDEEVMMTETISEEGCSESALDKCLVNLPMKWSSDNLRSFLNEQGIQYKSAK 580
            GEK  D ++++VMMTE + ++ C++  L KCL++LP KW SD LR FL +QG+ YKSAK
Sbjct: 123 SGEK-CDSKEDDVMMTEAVVDDDCADPGLSKCLLHLPPKWHSDQLRDFLGQQGVIYKSAK 181

Query: 581 TKK 589
            KK
Sbjct: 182 KKK 184


>ref|XP_003540739.1| PREDICTED: zinc finger CCCH domain-containing protein 24-like
           [Glycine max]
          Length = 888

 Score =  179 bits (454), Expect = 3e-43
 Identities = 101/195 (51%), Positives = 126/195 (64%), Gaps = 5/195 (2%)
 Frame = +2

Query: 20  KPLTVTMMATETLNTPTNGSTSDVTGELNQPDDCLNVSHSSPDAIPLGDGEQGEKRKRTE 199
           +PL+ T +++     PTNG  S        P+D  +  +   D +P        KRKR +
Sbjct: 3   EPLSNTELSSSKTLDPTNGHDSTSEPHQTAPED--SQLNREDDVVPTA------KRKRDD 54

Query: 200 SETDQKTISVHPLWKTSLCSYFRRTGGECSHGETCRYAHGEEELRPRPDNTWDPTSERAK 379
              D+   S+HPLWKTSLCSYFR   G CSHG  CRYAHGEEELRPRPDNTWDPTSERAK
Sbjct: 55  DVEDR---SLHPLWKTSLCSYFRSHNGSCSHGGACRYAHGEEELRPRPDNTWDPTSERAK 111

Query: 380 K-LKVENEDGEKHSDGRDEEVMMTETI---SEEGC-SESALDKCLVNLPMKWSSDNLRSF 544
           K LK E+++    S    EEVMMTE +    ++GC +  AL+ CLV+LP KWSS+NLR+F
Sbjct: 112 KALKTESDEKRAVS----EEVMMTEAVVDDGDDGCGANHALNICLVHLPRKWSSENLRTF 167

Query: 545 LNEQGIQYKSAKTKK 589
           L+EQGI +K AK KK
Sbjct: 168 LSEQGIPFKHAKKKK 182


>ref|XP_003539207.1| PREDICTED: zinc finger CCCH domain-containing protein 24-like
           [Glycine max]
          Length = 833

 Score =  170 bits (430), Expect = 2e-40
 Identities = 98/193 (50%), Positives = 120/193 (62%), Gaps = 12/193 (6%)
 Frame = +2

Query: 47  TETLNTPTNGSTSDVTGELNQPDDCLNVSHSSPDAIPLG---DGEQGEKRKRTESETDQK 217
           TE L+  T  S+S      N+ D       ++P+ + L    D     KRKR +   + +
Sbjct: 2   TEPLSN-TELSSSKTLDPTNRHDSTSEPHQTAPEEVELNREDDVVPTAKRKRNDGVVEDR 60

Query: 218 TISVHPLWKTSLCSYFRRTGGECSHGETCRYAHGEEELRPRPDNTWDPTSERAKK-LKVE 394
            +  HPLWKTSLCSYFR   G CSHG  CRYAHGEEELR RPDNTWDPTSERAKK LK E
Sbjct: 61  LL--HPLWKTSLCSYFRSHNGSCSHGGACRYAHGEEELRLRPDNTWDPTSERAKKALKTE 118

Query: 395 NEDGEKHSDGRDEEVMMTETI-------SEEGC-SESALDKCLVNLPMKWSSDNLRSFLN 550
           ++D    S    EEVMMTE +        ++GC +  AL KCLV+LP KWSS+N R+FL+
Sbjct: 119 SDDKRAVS----EEVMMTEAVVDDGDADGDDGCGANHALSKCLVHLPRKWSSENFRTFLS 174

Query: 551 EQGIQYKSAKTKK 589
           EQGI +K AK KK
Sbjct: 175 EQGIAFKHAKKKK 187


>ref|XP_002530289.1| RNA m5u methyltransferase, putative [Ricinus communis]
           gi|223530187|gb|EEF32096.1| RNA m5u methyltransferase,
           putative [Ricinus communis]
          Length = 863

 Score =  169 bits (427), Expect = 4e-40
 Identities = 95/200 (47%), Positives = 125/200 (62%), Gaps = 19/200 (9%)
 Frame = +2

Query: 47  TETLNTPTNGSTSDVTGELNQPDDCLNVSHSSPDAIPLGD--GEQGEKRKRTE-----SE 205
           TETLN     S ++++  ++       ++ ++ D    G+    QGEKRKR E     SE
Sbjct: 13  TETLNP---SSITEISKPMSPQSPETTIAATADDNNNNGNESNNQGEKRKREETEEQQSE 69

Query: 206 TDQKT-ISVHPLWKTSLCSYFRRTGGECSHGETCRYAHGEEELRPRPDNTWDPTSERAKK 382
           T++K+ +S +P +KTSLCSYFRR    CSHG  C+YAHGEEELR RPDNTWDPTSERAKK
Sbjct: 70  TEEKSELSHNPYYKTSLCSYFRRHSASCSHGSECKYAHGEEELRQRPDNTWDPTSERAKK 129

Query: 383 -LKVENEDGEKHSDGRDEEVMMTETISEE----------GCSESALDKCLVNLPMKWSSD 529
            +K+E            EE+MMTE I ++          GC +  L KCLV+LP KW+SD
Sbjct: 130 AIKLEKNSDNCDVKEEKEEIMMTEMIGDDDGDGAGGEGGGCLDPELSKCLVHLPRKWNSD 189

Query: 530 NLRSFLNEQGIQYKSAKTKK 589
           N ++FLNEQG+ +K AK KK
Sbjct: 190 NFKNFLNEQGVLFKWAKKKK 209


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