BLASTX nr result

ID: Atractylodes22_contig00034576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00034576
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...   144   6e-33
emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]   144   6e-33
ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...   142   4e-32
ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   135   5e-30

>ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
           vinifera]
          Length = 416

 Score =  144 bits (364), Expect = 6e-33
 Identities = 81/151 (53%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
 Frame = +1

Query: 1   LLLHNGLIHKFRLS---FHGFRDIDRWILFLSRGSVKEIVLEILEICPSDPYFKLGSSLY 171
           LLLH G IHKFRLS   F G  DIDRWIL+LSR  ++E +LEI +               
Sbjct: 77  LLLHTGPIHKFRLSHRDFLGGSDIDRWILYLSRTPIREFILEIWK--------------- 121

Query: 172 SCDKPYYKLPSSLYLCDKLSHLQLSNCLLKPPSTFNGFKMLTNLDLSKISMEQDRLENLI 351
                +YKLPS LY C  L HL+L N LLKPP TF GF  L +LDL  I M QD  ENLI
Sbjct: 122 ---GQHYKLPSCLYNCQSLIHLELFNSLLKPPPTFKGFMSLKSLDLQHIIMAQDAFENLI 178

Query: 352 FKCPLLERLTLMDIYGLGHLKIHAPKLTFFD 444
             CPLLE+ TLM+  G  HL IHAP L FFD
Sbjct: 179 SSCPLLEKFTLMNFDGFTHLNIHAPNLQFFD 209


>emb|CAN79162.1| hypothetical protein VITISV_019244 [Vitis vinifera]
          Length = 416

 Score =  144 bits (364), Expect = 6e-33
 Identities = 81/151 (53%), Positives = 91/151 (60%), Gaps = 3/151 (1%)
 Frame = +1

Query: 1   LLLHNGLIHKFRLS---FHGFRDIDRWILFLSRGSVKEIVLEILEICPSDPYFKLGSSLY 171
           LLLH G IHKFRLS   F G  DIDRWIL+LSR  ++E +LEI +               
Sbjct: 77  LLLHTGPIHKFRLSHRDFLGGSDIDRWILYLSRTPIREFILEIWK--------------- 121

Query: 172 SCDKPYYKLPSSLYLCDKLSHLQLSNCLLKPPSTFNGFKMLTNLDLSKISMEQDRLENLI 351
                +YKLPS LY C  L HL+L N LLKPP TF GF  L +LDL  I M QD  ENLI
Sbjct: 122 ---GQHYKLPSCLYNCQSLIHLELFNSLLKPPPTFKGFXSLKSLDLQHIIMAQDAFENLI 178

Query: 352 FKCPLLERLTLMDIYGLGHLKIHAPKLTFFD 444
             CPLLE+ TLM+  G  HL IHAP L FFD
Sbjct: 179 SSCPLLEKFTLMNFDGFTHLNIHAPNLQFFD 209


>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score =  142 bits (357), Expect = 4e-32
 Identities = 79/151 (52%), Positives = 95/151 (62%), Gaps = 3/151 (1%)
 Frame = +1

Query: 1   LLLHNGLIHKFRLSFH---GFRDIDRWILFLSRGSVKEIVLEILEICPSDPYFKLGSSLY 171
           LLLHNG I KF+LS     G  DIDRWIL LSR S+KE +LEI +               
Sbjct: 87  LLLHNGPIQKFKLSHRDLLGVSDIDRWILHLSRSSIKEFILEIWK--------------- 131

Query: 172 SCDKPYYKLPSSLYLCDKLSHLQLSNCLLKPPSTFNGFKMLTNLDLSKISMEQDRLENLI 351
                 YK+PSSL+  + L HL+L NCLL+PP TF GF+ L +LDL  I++ Q+  ENLI
Sbjct: 132 ---GQRYKVPSSLFSFEHLIHLELFNCLLQPPLTFKGFRSLKSLDLQHITLTQNVFENLI 188

Query: 352 FKCPLLERLTLMDIYGLGHLKIHAPKLTFFD 444
           F CPLLERLTLM+  G  HL I+AP L FFD
Sbjct: 189 FSCPLLERLTLMNFDGFTHLNINAPNLQFFD 219


>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  140 bits (353), Expect = 1e-31
 Identities = 79/151 (52%), Positives = 94/151 (62%), Gaps = 3/151 (1%)
 Frame = +1

Query: 1   LLLHNGLIHKFRLSFH---GFRDIDRWILFLSRGSVKEIVLEILEICPSDPYFKLGSSLY 171
           LLLHNG I+KF+LS     G  DIDRWIL LSRGS KE VLEI +               
Sbjct: 77  LLLHNGPIYKFKLSHRDLLGVSDIDRWILHLSRGSTKEFVLEIWK--------------- 121

Query: 172 SCDKPYYKLPSSLYLCDKLSHLQLSNCLLKPPSTFNGFKMLTNLDLSKISMEQDRLENLI 351
                 YKLPS L+  + L+HL+L NCLLKPP  F GF+ L +LDL  +++ Q+  ENLI
Sbjct: 122 ---GQRYKLPSCLFSFENLTHLELFNCLLKPPPAFKGFRNLKSLDLQHVTLAQEVFENLI 178

Query: 352 FKCPLLERLTLMDIYGLGHLKIHAPKLTFFD 444
             C LLERLTLM+  G  HLKI+AP L FFD
Sbjct: 179 SSCALLERLTLMNFDGFTHLKINAPNLQFFD 209


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score =  135 bits (339), Expect = 5e-30
 Identities = 76/151 (50%), Positives = 90/151 (59%), Gaps = 3/151 (1%)
 Frame = +1

Query: 1   LLLHNGLIHKFRLSFH---GFRDIDRWILFLSRGSVKEIVLEILEICPSDPYFKLGSSLY 171
           LLLH+G I KF+LS     G  DIDRW L L+R  VKE VLEI +               
Sbjct: 88  LLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWK--------------- 132

Query: 172 SCDKPYYKLPSSLYLCDKLSHLQLSNCLLKPPSTFNGFKMLTNLDLSKISMEQDRLENLI 351
                 YK+PS L+ C  L HL+L NC L PPSTF GF+ L +LDL  +++ QD  ENLI
Sbjct: 133 ---GQRYKIPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTLSQDAFENLI 189

Query: 352 FKCPLLERLTLMDIYGLGHLKIHAPKLTFFD 444
             CPLLERLTLM+  G  +L IHAP L FFD
Sbjct: 190 STCPLLERLTLMNFDGFNYLNIHAPNLQFFD 220


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