BLASTX nr result

ID: Atractylodes22_contig00033370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00033370
         (204 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]    75   3e-16
ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-...    75   3e-16
emb|CBI15109.3| unnamed protein product [Vitis vinifera]               75   3e-16
ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arab...    74   2e-15
ref|NP_200908.1| Replication factor-A protein 1-like protein [Ar...    74   2e-15

>emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera]
          Length = 634

 Score = 75.5 bits (184), Expect(2) = 3e-16
 Identities = 34/43 (79%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   LSSLNPYQGNWTIKVFLVNKGVMRTYKNATGEGCLFNTELANE 129
           L SLNPYQGNWTIKV L NKG MRTYKNA GEGC+FN EL +E
Sbjct: 181 LVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFNVELTDE 223



 Score = 34.3 bits (77), Expect(2) = 3e-16
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +3

Query: 156 GTQIQATMFNEAAKKF 203
           GTQIQATMFNEAA+KF
Sbjct: 225 GTQIQATMFNEAARKF 240


>ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform
           1 [Vitis vinifera]
          Length = 625

 Score = 75.5 bits (184), Expect(2) = 3e-16
 Identities = 34/43 (79%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   LSSLNPYQGNWTIKVFLVNKGVMRTYKNATGEGCLFNTELANE 129
           L SLNPYQGNWTIKV L NKG MRTYKNA GEGC+FN EL +E
Sbjct: 181 LVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFNVELTDE 223



 Score = 34.3 bits (77), Expect(2) = 3e-16
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +3

Query: 156 GTQIQATMFNEAAKKF 203
           GTQIQATMFNEAA+KF
Sbjct: 225 GTQIQATMFNEAARKF 240


>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score = 75.5 bits (184), Expect(2) = 3e-16
 Identities = 34/43 (79%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   LSSLNPYQGNWTIKVFLVNKGVMRTYKNATGEGCLFNTELANE 129
           L SLNPYQGNWTIKV L NKG MRTYKNA GEGC+FN EL +E
Sbjct: 158 LVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFNVELTDE 200



 Score = 34.3 bits (77), Expect(2) = 3e-16
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +3

Query: 156 GTQIQATMFNEAAKKF 203
           GTQIQATMFNEAA+KF
Sbjct: 202 GTQIQATMFNEAARKF 217


>ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
           lyrata] gi|297312244|gb|EFH42668.1| hypothetical protein
           ARALYDRAFT_496254 [Arabidopsis lyrata subsp. lyrata]
          Length = 631

 Score = 73.9 bits (180), Expect(2) = 2e-15
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   LSSLNPYQGNWTIKVFLVNKGVMRTYKNATGEGCLFNTELANE 129
           L SLNPYQGNWTIKV + NKGVMR YKNA GEGC+FN EL +E
Sbjct: 186 LVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDE 228



 Score = 33.1 bits (74), Expect(2) = 2e-15
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = +3

Query: 156 GTQIQATMFNEAAKKF 203
           GTQIQATMFN+AA+KF
Sbjct: 230 GTQIQATMFNDAARKF 245


>ref|NP_200908.1| Replication factor-A protein 1-like protein [Arabidopsis thaliana]
           gi|10177323|dbj|BAB10649.1| replication protein A1
           [Arabidopsis thaliana] gi|28393124|gb|AAO41995.1|
           putative RNA helicase [Arabidopsis thaliana]
           gi|332010026|gb|AED97409.1| Replication factor-A protein
           1-like protein [Arabidopsis thaliana]
          Length = 629

 Score = 73.9 bits (180), Expect(2) = 2e-15
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = +1

Query: 1   LSSLNPYQGNWTIKVFLVNKGVMRTYKNATGEGCLFNTELANE 129
           L SLNPYQGNWTIKV + NKGVMR YKNA GEGC+FN EL +E
Sbjct: 184 LVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDE 226



 Score = 33.1 bits (74), Expect(2) = 2e-15
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = +3

Query: 156 GTQIQATMFNEAAKKF 203
           GTQIQATMFN+AA+KF
Sbjct: 228 GTQIQATMFNDAARKF 243


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