BLASTX nr result
ID: Atractylodes22_contig00033370
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes22_contig00033370 (204 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera] 75 3e-16 ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-... 75 3e-16 emb|CBI15109.3| unnamed protein product [Vitis vinifera] 75 3e-16 ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arab... 74 2e-15 ref|NP_200908.1| Replication factor-A protein 1-like protein [Ar... 74 2e-15 >emb|CAN71402.1| hypothetical protein VITISV_006284 [Vitis vinifera] Length = 634 Score = 75.5 bits (184), Expect(2) = 3e-16 Identities = 34/43 (79%), Positives = 36/43 (83%) Frame = +1 Query: 1 LSSLNPYQGNWTIKVFLVNKGVMRTYKNATGEGCLFNTELANE 129 L SLNPYQGNWTIKV L NKG MRTYKNA GEGC+FN EL +E Sbjct: 181 LVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFNVELTDE 223 Score = 34.3 bits (77), Expect(2) = 3e-16 Identities = 15/16 (93%), Positives = 16/16 (100%) Frame = +3 Query: 156 GTQIQATMFNEAAKKF 203 GTQIQATMFNEAA+KF Sbjct: 225 GTQIQATMFNEAARKF 240 >ref|XP_002283959.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit isoform 1 [Vitis vinifera] Length = 625 Score = 75.5 bits (184), Expect(2) = 3e-16 Identities = 34/43 (79%), Positives = 36/43 (83%) Frame = +1 Query: 1 LSSLNPYQGNWTIKVFLVNKGVMRTYKNATGEGCLFNTELANE 129 L SLNPYQGNWTIKV L NKG MRTYKNA GEGC+FN EL +E Sbjct: 181 LVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFNVELTDE 223 Score = 34.3 bits (77), Expect(2) = 3e-16 Identities = 15/16 (93%), Positives = 16/16 (100%) Frame = +3 Query: 156 GTQIQATMFNEAAKKF 203 GTQIQATMFNEAA+KF Sbjct: 225 GTQIQATMFNEAARKF 240 >emb|CBI15109.3| unnamed protein product [Vitis vinifera] Length = 602 Score = 75.5 bits (184), Expect(2) = 3e-16 Identities = 34/43 (79%), Positives = 36/43 (83%) Frame = +1 Query: 1 LSSLNPYQGNWTIKVFLVNKGVMRTYKNATGEGCLFNTELANE 129 L SLNPYQGNWTIKV L NKG MRTYKNA GEGC+FN EL +E Sbjct: 158 LVSLNPYQGNWTIKVRLTNKGTMRTYKNARGEGCVFNVELTDE 200 Score = 34.3 bits (77), Expect(2) = 3e-16 Identities = 15/16 (93%), Positives = 16/16 (100%) Frame = +3 Query: 156 GTQIQATMFNEAAKKF 203 GTQIQATMFNEAA+KF Sbjct: 202 GTQIQATMFNEAARKF 217 >ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp. lyrata] gi|297312244|gb|EFH42668.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp. lyrata] Length = 631 Score = 73.9 bits (180), Expect(2) = 2e-15 Identities = 33/43 (76%), Positives = 36/43 (83%) Frame = +1 Query: 1 LSSLNPYQGNWTIKVFLVNKGVMRTYKNATGEGCLFNTELANE 129 L SLNPYQGNWTIKV + NKGVMR YKNA GEGC+FN EL +E Sbjct: 186 LVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDE 228 Score = 33.1 bits (74), Expect(2) = 2e-15 Identities = 14/16 (87%), Positives = 16/16 (100%) Frame = +3 Query: 156 GTQIQATMFNEAAKKF 203 GTQIQATMFN+AA+KF Sbjct: 230 GTQIQATMFNDAARKF 245 >ref|NP_200908.1| Replication factor-A protein 1-like protein [Arabidopsis thaliana] gi|10177323|dbj|BAB10649.1| replication protein A1 [Arabidopsis thaliana] gi|28393124|gb|AAO41995.1| putative RNA helicase [Arabidopsis thaliana] gi|332010026|gb|AED97409.1| Replication factor-A protein 1-like protein [Arabidopsis thaliana] Length = 629 Score = 73.9 bits (180), Expect(2) = 2e-15 Identities = 33/43 (76%), Positives = 36/43 (83%) Frame = +1 Query: 1 LSSLNPYQGNWTIKVFLVNKGVMRTYKNATGEGCLFNTELANE 129 L SLNPYQGNWTIKV + NKGVMR YKNA GEGC+FN EL +E Sbjct: 184 LVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDE 226 Score = 33.1 bits (74), Expect(2) = 2e-15 Identities = 14/16 (87%), Positives = 16/16 (100%) Frame = +3 Query: 156 GTQIQATMFNEAAKKF 203 GTQIQATMFN+AA+KF Sbjct: 228 GTQIQATMFNDAARKF 243